RNA–Protein interactions for RNA: ENST00000476538.1

APH1A-206, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-206ENST00000476538 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
APH1A-206ENST00000476538 MSH5O43196 834 aa20.4■□□□□ 0.86
APH1A-206ENST00000476538 CABP4P57796 275 aa20.4■□□□□ 0.86
APH1A-206ENST00000476538 LINC00116Q8NCU8 138 aa20.4■□□□□ 0.86
APH1A-206ENST00000476538 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
APH1A-206ENST00000476538 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
APH1A-206ENST00000476538 ITPK1Q13572 414 aa20.39■□□□□ 0.85
APH1A-206ENST00000476538 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.85
APH1A-206ENST00000476538 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
APH1A-206ENST00000476538 MRC1P22897 1456 aa20.37■□□□□ 0.85
APH1A-206ENST00000476538 COL5A3P25940 1745 aaPredicted RBP20.37■□□□□ 0.85
APH1A-206ENST00000476538 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
APH1A-206ENST00000476538 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
APH1A-206ENST00000476538 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
APH1A-206ENST00000476538 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
APH1A-206ENST00000476538 SSFA2P28290 1259 aa20.35■□□□□ 0.85
APH1A-206ENST00000476538 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
APH1A-206ENST00000476538 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
APH1A-206ENST00000476538 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
APH1A-206ENST00000476538 SLC4A9Q96Q91 983 aa20.35■□□□□ 0.85
APH1A-206ENST00000476538 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
APH1A-206ENST00000476538 CICQ96RK0 1608 aaPredicted RBP20.35■□□□□ 0.85
APH1A-206ENST00000476538 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
APH1A-206ENST00000476538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.34■□□□□ 0.85
APH1A-206ENST00000476538 PHF14O94880 888 aa20.34■□□□□ 0.85
APH1A-206ENST00000476538 PPP2R1AP30153 589 aa20.34■□□□□ 0.85
APH1A-206ENST00000476538 GNPATO15228 680 aa20.33■□□□□ 0.85
APH1A-206ENST00000476538 MSL1Q68DK7 614 aa20.33■□□□□ 0.85
APH1A-206ENST00000476538 SLC52A2Q9HAB3 445 aa20.32■□□□□ 0.84
APH1A-206ENST00000476538 TJP1Q07157 1748 aa20.31■□□□□ 0.84
APH1A-206ENST00000476538 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
APH1A-206ENST00000476538 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
APH1A-206ENST00000476538 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
APH1A-206ENST00000476538 CNTNAP4Q9C0A0 1308 aa20.3■□□□□ 0.84
APH1A-206ENST00000476538 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
APH1A-206ENST00000476538 UTRNP46939 3433 aa20.3■□□□□ 0.84
APH1A-206ENST00000476538 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
APH1A-206ENST00000476538 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
APH1A-206ENST00000476538 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
APH1A-206ENST00000476538 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
APH1A-206ENST00000476538 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
APH1A-206ENST00000476538 RTCBQ9Y3I0 505 aaKnown RBP20.27■□□□□ 0.84
APH1A-206ENST00000476538 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.83
APH1A-206ENST00000476538 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
APH1A-206ENST00000476538 C4AP0C0L4 1744 aa20.25■□□□□ 0.83
APH1A-206ENST00000476538 ADRA2BP18089 450 aa20.25■□□□□ 0.83
APH1A-206ENST00000476538 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
APH1A-206ENST00000476538 UBR2Q8IWV8 1755 aa20.25■□□□□ 0.83
APH1A-206ENST00000476538 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
APH1A-206ENST00000476538 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
APH1A-206ENST00000476538 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
APH1A-206ENST00000476538 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
APH1A-206ENST00000476538 MYH14Q7Z406 1995 aaKnown RBP20.24■□□□□ 0.83
APH1A-206ENST00000476538 SIPA1L3O60292 1781 aaPredicted RBP20.23■□□□□ 0.83
APH1A-206ENST00000476538 RPS6KA4O75676 772 aa20.23■□□□□ 0.83
APH1A-206ENST00000476538 YY1P25490 414 aa20.23■□□□□ 0.83
APH1A-206ENST00000476538 SLC39A6Q13433 755 aa20.23■□□□□ 0.83
APH1A-206ENST00000476538 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
APH1A-206ENST00000476538 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
APH1A-206ENST00000476538 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
APH1A-206ENST00000476538 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
APH1A-206ENST00000476538 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
APH1A-206ENST00000476538 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
APH1A-206ENST00000476538 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
APH1A-206ENST00000476538 FCHSD2O94868 740 aa20.2■□□□□ 0.82
APH1A-206ENST00000476538 TEFQ10587 303 aa20.2■□□□□ 0.82
APH1A-206ENST00000476538 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
APH1A-206ENST00000476538 RFC4P35249 363 aa20.19■□□□□ 0.82
APH1A-206ENST00000476538 GPR162Q16538 588 aa20.19■□□□□ 0.82
APH1A-206ENST00000476538 TTC5Q8N0Z6 440 aa20.18■□□□□ 0.82
APH1A-206ENST00000476538 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
APH1A-206ENST00000476538 MMP10P09238 476 aa20.17■□□□□ 0.82
APH1A-206ENST00000476538 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
APH1A-206ENST00000476538 NLGN1Q8N2Q7 840 aa20.17■□□□□ 0.82
APH1A-206ENST00000476538 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
APH1A-206ENST00000476538 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
APH1A-206ENST00000476538 GYS1P13807 737 aa20.16■□□□□ 0.82
APH1A-206ENST00000476538 PELP1Q8IZL8 1130 aaKnown RBP20.16■□□□□ 0.82
APH1A-206ENST00000476538 RALBP1Q15311 655 aa20.15■□□□□ 0.82
APH1A-206ENST00000476538 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
APH1A-206ENST00000476538 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
APH1A-206ENST00000476538 CHD4Q14839 1912 aa20.15■□□□□ 0.82
APH1A-206ENST00000476538 SOS1Q07889 1333 aaPredicted RBP20.14■□□□□ 0.81
APH1A-206ENST00000476538 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
APH1A-206ENST00000476538 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
APH1A-206ENST00000476538 HEG1Q9ULI3 1381 aa20.13■□□□□ 0.81
APH1A-206ENST00000476538 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
APH1A-206ENST00000476538 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
APH1A-206ENST00000476538 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
APH1A-206ENST00000476538 C10orf71Q711Q0 1435 aa20.12■□□□□ 0.81
APH1A-206ENST00000476538 COL15A1P39059 1388 aa20.12■□□□□ 0.81
APH1A-206ENST00000476538 YBX3P16989 372 aaKnown RBP eCLIP20.12■□□□□ 0.816e-12■■□□□ 12.3
APH1A-206ENST00000476538 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
APH1A-206ENST00000476538 NEFMP07197 916 aa20.11■□□□□ 0.81
APH1A-206ENST00000476538 MCM10Q7L590 875 aa20.11■□□□□ 0.81
APH1A-206ENST00000476538 KIAA1551Q9HCM1 1747 aa20.1■□□□□ 0.81
APH1A-206ENST00000476538 BTBD11A6QL63 1104 aa20.1■□□□□ 0.81
APH1A-206ENST00000476538 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
APH1A-206ENST00000476538 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
APH1A-206ENST00000476538 FMNL2Q96PY5 1086 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms