RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 ITPK1Q13572 414 aa14.44□□□□□ -0.1
PGK1-203ENST00000476531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.1
PGK1-203ENST00000476531 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
PGK1-203ENST00000476531 GPBP1L1Q9HC44 474 aaPredicted RBP14.43□□□□□ -0.1
PGK1-203ENST00000476531 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
PGK1-203ENST00000476531 PHKG2P15735 406 aa14.42□□□□□ -0.1
PGK1-203ENST00000476531 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
PGK1-203ENST00000476531 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
PGK1-203ENST00000476531 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
PGK1-203ENST00000476531 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
PGK1-203ENST00000476531 ATG3Q9NT62 314 aa14.41□□□□□ -0.1
PGK1-203ENST00000476531 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
PGK1-203ENST00000476531 KDRP35968 1356 aa14.4□□□□□ -0.1
PGK1-203ENST00000476531 GNPATO15228 680 aa14.4□□□□□ -0.1
PGK1-203ENST00000476531 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
PGK1-203ENST00000476531 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
PGK1-203ENST00000476531 CICQ96RK0 1608 aaPredicted RBP14.4□□□□□ -0.1
PGK1-203ENST00000476531 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
PGK1-203ENST00000476531 MMP10P09238 476 aa14.38□□□□□ -0.11
PGK1-203ENST00000476531 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
PGK1-203ENST00000476531 SLC4A9Q96Q91 983 aa14.38□□□□□ -0.11
PGK1-203ENST00000476531 KIAA1551Q9HCM1 1747 aa14.38□□□□□ -0.11
PGK1-203ENST00000476531 PLEKHG2Q9H7P9 1386 aa14.37□□□□□ -0.11
PGK1-203ENST00000476531 KIF3CO14782 793 aa14.37□□□□□ -0.11
PGK1-203ENST00000476531 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
PGK1-203ENST00000476531 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
PGK1-203ENST00000476531 ZNF831Q5JPB2 1677 aa14.35□□□□□ -0.11
PGK1-203ENST00000476531 ERVV-2B6SEH9 535 aa14.34□□□□□ -0.11
PGK1-203ENST00000476531 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
PGK1-203ENST00000476531 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
PGK1-203ENST00000476531 RTCBQ9Y3I0 505 aaKnown RBP14.34□□□□□ -0.11
PGK1-203ENST00000476531 KDM6AO15550 1401 aaPredicted RBP14.33□□□□□ -0.11
PGK1-203ENST00000476531 TGFB2P61812 414 aa14.33□□□□□ -0.12
PGK1-203ENST00000476531 RC3H1Q5TC82 1133 aaKnown RBP14.33□□□□□ -0.12
PGK1-203ENST00000476531 NLGN1Q8N2Q7 840 aa14.33□□□□□ -0.12
PGK1-203ENST00000476531 ARHGEF1Q92888 912 aaKnown RBP14.33□□□□□ -0.12
PGK1-203ENST00000476531 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
PGK1-203ENST00000476531 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
PGK1-203ENST00000476531 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
PGK1-203ENST00000476531 GYS1P13807 737 aa14.32□□□□□ -0.12
PGK1-203ENST00000476531 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
PGK1-203ENST00000476531 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
PGK1-203ENST00000476531 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
PGK1-203ENST00000476531 RPS6KA4O75676 772 aa14.31□□□□□ -0.12
PGK1-203ENST00000476531 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
PGK1-203ENST00000476531 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
PGK1-203ENST00000476531 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
PGK1-203ENST00000476531 C4AP0C0L4 1744 aa14.31□□□□□ -0.12
PGK1-203ENST00000476531 DPEP1P16444 411 aa14.3□□□□□ -0.12
PGK1-203ENST00000476531 APLP1P51693 650 aa14.3□□□□□ -0.12
PGK1-203ENST00000476531 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
PGK1-203ENST00000476531 DNAJC5GQ8N7S2 189 aa14.3□□□□□ -0.12
PGK1-203ENST00000476531 CCDC87Q9NVE4 849 aa14.3□□□□□ -0.12
PGK1-203ENST00000476531 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
PGK1-203ENST00000476531 MIER1Q8N108 512 aa14.29□□□□□ -0.12
PGK1-203ENST00000476531 PANK3Q9H999 370 aa14.29□□□□□ -0.12
PGK1-203ENST00000476531 KCNA3P22001 575 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 RFC4P35249 363 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 CABP4P57796 275 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 ARHGAP27Q6ZUM4 889 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
PGK1-203ENST00000476531 MYH14Q7Z406 1995 aaKnown RBP14.27□□□□□ -0.12
PGK1-203ENST00000476531 FCHSD2O94868 740 aa14.27□□□□□ -0.13
PGK1-203ENST00000476531 PARP3Q9Y6F1 533 aa14.27□□□□□ -0.13
PGK1-203ENST00000476531 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.13
PGK1-203ENST00000476531 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
PGK1-203ENST00000476531 TOMM70O94826 608 aa14.26□□□□□ -0.13
PGK1-203ENST00000476531 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
PGK1-203ENST00000476531 MTHFSP49914 203 aa14.26□□□□□ -0.13
PGK1-203ENST00000476531 CNGB1Q14028 1251 aaPredicted RBP14.26□□□□□ -0.13
PGK1-203ENST00000476531 NMRK2Q9NPI5 230 aa14.26□□□□□ -0.13
PGK1-203ENST00000476531 SRP68Q9UHB9 627 aaKnown RBP14.26□□□□□ -0.13
PGK1-203ENST00000476531 TJP1Q07157 1748 aa14.25□□□□□ -0.13
PGK1-203ENST00000476531 DDR1Q08345 913 aa14.25□□□□□ -0.13
PGK1-203ENST00000476531 FKBP8Q14318 412 aa14.25□□□□□ -0.13
PGK1-203ENST00000476531 USP42Q9H9J4 1324 aaKnown RBP14.24□□□□□ -0.13
PGK1-203ENST00000476531 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
PGK1-203ENST00000476531 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
PGK1-203ENST00000476531 C9orf131Q5VYM1 1079 aa14.24□□□□□ -0.13
PGK1-203ENST00000476531 NFATC2IPQ8NCF5 419 aa14.24□□□□□ -0.13
PGK1-203ENST00000476531 PCNTO95613 3336 aa14.24□□□□□ -0.13
PGK1-203ENST00000476531 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
PGK1-203ENST00000476531 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
PGK1-203ENST00000476531 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
PGK1-203ENST00000476531 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
PGK1-203ENST00000476531 IL13P35225 146 aa14.22□□□□□ -0.13
PGK1-203ENST00000476531 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
PGK1-203ENST00000476531 MORC1Q86VD1 984 aa14.22□□□□□ -0.13
PGK1-203ENST00000476531 POLRMTO00411 1230 aaKnown RBP14.21□□□□□ -0.13
PGK1-203ENST00000476531 TM4SF1P30408 202 aa14.21□□□□□ -0.13
PGK1-203ENST00000476531 CHRNA5P30532 468 aa14.21□□□□□ -0.13
PGK1-203ENST00000476531 DALRD3Q5D0E6 543 aaKnown RBP14.21□□□□□ -0.13
PGK1-203ENST00000476531 COL13A1Q5TAT6 717 aaPredicted RBP14.21□□□□□ -0.13
PGK1-203ENST00000476531 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.13
PGK1-203ENST00000476531 KCPQ6ZWJ8 1503 aa14.2□□□□□ -0.14
PGK1-203ENST00000476531 SCN11AQ9UI33 1791 aa14.19□□□□□ -0.14
PGK1-203ENST00000476531 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
PGK1-203ENST00000476531 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
PGK1-203ENST00000476531 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms