RNA–Protein interactions for RNA: ENST00000476475.1

CLDN12-208, Transcript of claudin 12, humanhuman

TSL 2

Gene CLDN12, Length 372 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-208ENST00000476475 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
CLDN12-208ENST00000476475 STAU1O95793 577 aaKnown RBP8.94□□□□□ -0.98
CLDN12-208ENST00000476475 PSME1Q06323 249 aa8.94□□□□□ -0.98
CLDN12-208ENST00000476475 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
CLDN12-208ENST00000476475 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
CLDN12-208ENST00000476475 DNAAF2Q9NVR5 837 aaKnown RBP8.94□□□□□ -0.98
CLDN12-208ENST00000476475 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
CLDN12-208ENST00000476475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.93□□□□□ -0.98
CLDN12-208ENST00000476475 SIX5Q8N196 739 aa8.93□□□□□ -0.98
CLDN12-208ENST00000476475 KIAA1024Q9UPX6 916 aa8.93□□□□□ -0.98
CLDN12-208ENST00000476475 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
CLDN12-208ENST00000476475 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
CLDN12-208ENST00000476475 RASA1P20936 1047 aa8.92□□□□□ -0.98
CLDN12-208ENST00000476475 GRIP2Q9C0E4 1043 aa8.92□□□□□ -0.98
CLDN12-208ENST00000476475 SOBPA7XYQ1 873 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
CLDN12-208ENST00000476475 RFX1P22670 979 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 SRPK2P78362 688 aaKnown RBP8.91□□□□□ -0.98
CLDN12-208ENST00000476475 CENPCQ03188 943 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
CLDN12-208ENST00000476475 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 TPCN2Q8NHX9 752 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
CLDN12-208ENST00000476475 FHDC1Q9C0D6 1143 aaPredicted RBP8.91□□□□□ -0.98
CLDN12-208ENST00000476475 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L10C9JJH3 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L12C9JPN9 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L21D6R901 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 BACH1O14867 736 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 DKK1O94907 266 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 PTK7Q13308 1070 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 CRTC2Q53ET0 693 aaPredicted RBP8.9□□□□□ -0.98
CLDN12-208ENST00000476475 SLC27A3Q5K4L6 730 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
CLDN12-208ENST00000476475 ZNF358Q9NW07 568 aa8.9□□□□□ -0.98
CLDN12-208ENST00000476475 TLR1Q15399 786 aa8.89□□□□□ -0.99
CLDN12-208ENST00000476475 PBXIP1Q96AQ6 731 aa8.89□□□□□ -0.99
CLDN12-208ENST00000476475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.88□□□□□ -0.99
CLDN12-208ENST00000476475 SPATA31C2B4DYI2 1134 aa8.88□□□□□ -0.99
CLDN12-208ENST00000476475 M0R2N6 131 aa8.88□□□□□ -0.99
CLDN12-208ENST00000476475 SMTNP53814 917 aa8.88□□□□□ -0.99
CLDN12-208ENST00000476475 MTFR1Q15390 333 aa8.88□□□□□ -0.99
CLDN12-208ENST00000476475 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLDN12-208ENST00000476475 ZSCAN10Q96SZ4 725 aaPredicted RBP8.88□□□□□ -0.99
CLDN12-208ENST00000476475 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
CLDN12-208ENST00000476475 SUZ12Q15022 739 aaKnown RBP8.87□□□□□ -0.99
CLDN12-208ENST00000476475 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
CLDN12-208ENST00000476475 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
CLDN12-208ENST00000476475 A6NJY4 79 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
CLDN12-208ENST00000476475 EPHA4P54764 986 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 SEC13P55735 322 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 KCNMA1Q12791 1236 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
CLDN12-208ENST00000476475 WDR44Q5JSH3 913 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
CLDN12-208ENST00000476475 ANKMY2Q8IV38 441 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 ARXQ96QS3 562 aa8.86□□□□□ -0.99
CLDN12-208ENST00000476475 ATG7O95352 703 aa8.85□□□□□ -0.99
CLDN12-208ENST00000476475 GSK3AP49840 483 aa8.85□□□□□ -0.99
CLDN12-208ENST00000476475 PTSQ03393 145 aa8.85□□□□□ -0.99
CLDN12-208ENST00000476475 TMEM214Q6NUQ4 689 aaKnown RBP8.85□□□□□ -0.99
CLDN12-208ENST00000476475 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
CLDN12-208ENST00000476475 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
CLDN12-208ENST00000476475 RHBDD1Q8TEB9 315 aa8.85□□□□□ -0.99
CLDN12-208ENST00000476475 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
CLDN12-208ENST00000476475 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 CDK2AP1O14519 115 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
CLDN12-208ENST00000476475 DPYDQ12882 1025 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 GNASQ5JWF2 1037 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 TAS1R3Q7RTX0 852 aa8.84□□□□□ -0.99
CLDN12-208ENST00000476475 SCHIP1Q9P0W5 487 aaPredicted RBP8.84□□□□□ -0.99
CLDN12-208ENST00000476475 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
CLDN12-208ENST00000476475 SLC35F4A4IF30 521 aa8.83□□□□□ -1
CLDN12-208ENST00000476475 FOXK2Q01167 660 aa8.83□□□□□ -1
CLDN12-208ENST00000476475 POU4F2Q12837 409 aa8.83□□□□□ -1
CLDN12-208ENST00000476475 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
CLDN12-208ENST00000476475 RHOQP17081 205 aa8.82□□□□□ -1
CLDN12-208ENST00000476475 TNS4Q8IZW8 715 aa8.82□□□□□ -1
CLDN12-208ENST00000476475 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
CLDN12-208ENST00000476475 ZMIZ1Q9ULJ6 1067 aa8.82□□□□□ -1
CLDN12-208ENST00000476475 C4orf17Q53FE4 359 aa8.81□□□□□ -1
CLDN12-208ENST00000476475 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
CLDN12-208ENST00000476475 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
CLDN12-208ENST00000476475 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
CLDN12-208ENST00000476475 NIFKQ9BYG3 293 aaKnown RBP8.81□□□□□ -1
CLDN12-208ENST00000476475 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
CLDN12-208ENST00000476475 USP3Q9Y6I4 520 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms