RNA–Protein interactions for RNA: ENST00000476268.6

RPL13A-206, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-206ENST00000476268 CHMP4BQ9H444 224 aaKnown RBP22.95■■□□□ 1.26
RPL13A-206ENST00000476268 CACNA1FO60840 1977 aa22.95■■□□□ 1.26
RPL13A-206ENST00000476268 COL16A1Q07092 1604 aaPredicted RBP22.94■■□□□ 1.26
RPL13A-206ENST00000476268 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
RPL13A-206ENST00000476268 SLC4A2P04920 1241 aa22.93■■□□□ 1.26
RPL13A-206ENST00000476268 PCDHB15Q9Y5E8 787 aa22.93■■□□□ 1.26
RPL13A-206ENST00000476268 IGHDP01880 384 aa22.93■■□□□ 1.26
RPL13A-206ENST00000476268 EIF4A1P60842 406 aaKnown RBP22.93■■□□□ 1.26
RPL13A-206ENST00000476268 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
RPL13A-206ENST00000476268 STRN4Q9NRL3 753 aa22.93■■□□□ 1.26
RPL13A-206ENST00000476268 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
RPL13A-206ENST00000476268 HOXB7P09629 217 aa22.92■■□□□ 1.26
RPL13A-206ENST00000476268 CHMP4AQ9BY43 222 aa22.92■■□□□ 1.26
RPL13A-206ENST00000476268 LARP1Q6PKG0 1096 aaKnown RBP22.91■■□□□ 1.26
RPL13A-206ENST00000476268 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
RPL13A-206ENST00000476268 KDM6AO15550 1401 aaPredicted RBP22.91■■□□□ 1.26
RPL13A-206ENST00000476268 CYP27B1O15528 508 aa22.9■■□□□ 1.26
RPL13A-206ENST00000476268 DCAF5Q96JK2 942 aa22.9■■□□□ 1.26
RPL13A-206ENST00000476268 RWDD1Q9H446 243 aaPredicted RBP22.9■■□□□ 1.26
RPL13A-206ENST00000476268 IL2RBP14784 551 aa22.89■■□□□ 1.25
RPL13A-206ENST00000476268 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
RPL13A-206ENST00000476268 RGS12O14924 1447 aa22.89■■□□□ 1.25
RPL13A-206ENST00000476268 KCNQ3O43525 872 aa22.88■■□□□ 1.25
RPL13A-206ENST00000476268 ZCRB1Q8TBF4 217 aaKnown RBP22.88■■□□□ 1.25
RPL13A-206ENST00000476268 SLC52A2Q9HAB3 445 aa22.88■■□□□ 1.25
RPL13A-206ENST00000476268 ZBTB7BO15156 539 aaPredicted RBP22.87■■□□□ 1.25
RPL13A-206ENST00000476268 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
RPL13A-206ENST00000476268 INTS3Q68E01 1043 aaKnown RBP22.87■■□□□ 1.25
RPL13A-206ENST00000476268 HDGFL1Q5TGJ6 251 aa22.86■■□□□ 1.25
RPL13A-206ENST00000476268 MRC1P22897 1456 aa22.86■■□□□ 1.25
RPL13A-206ENST00000476268 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
RPL13A-206ENST00000476268 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
RPL13A-206ENST00000476268 G2E3Q7L622 706 aa22.86■■□□□ 1.25
RPL13A-206ENST00000476268 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
RPL13A-206ENST00000476268 NECTIN2Q92692 538 aa22.84■■□□□ 1.25
RPL13A-206ENST00000476268 HEG1Q9ULI3 1381 aa22.84■■□□□ 1.25
RPL13A-206ENST00000476268 HDAC1Q13547 482 aaPredicted RBP22.83■■□□□ 1.25
RPL13A-206ENST00000476268 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.24
RPL13A-206ENST00000476268 FLIIQ13045 1269 aa22.82■■□□□ 1.24
RPL13A-206ENST00000476268 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
RPL13A-206ENST00000476268 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
RPL13A-206ENST00000476268 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
RPL13A-206ENST00000476268 ZNF790Q6PG37 636 aa22.81■■□□□ 1.24
RPL13A-206ENST00000476268 EIF2S2P20042 333 aaKnown RBP22.8■■□□□ 1.24
RPL13A-206ENST00000476268 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
RPL13A-206ENST00000476268 CCT4P50991 539 aaKnown RBP22.79■■□□□ 1.24
RPL13A-206ENST00000476268 CABP4P57796 275 aa22.79■■□□□ 1.24
RPL13A-206ENST00000476268 FKBP5Q13451 457 aaPredicted RBP22.79■■□□□ 1.24
RPL13A-206ENST00000476268 SKAP1Q86WV1 359 aa22.78■■□□□ 1.24
RPL13A-206ENST00000476268 USP35Q9P2H5 1018 aa22.78■■□□□ 1.24
RPL13A-206ENST00000476268 RBM19Q9Y4C8 960 aaKnown RBP22.77■■□□□ 1.24
RPL13A-206ENST00000476268 N4BP2Q86UW6 1770 aaPredicted RBP22.77■■□□□ 1.24
RPL13A-206ENST00000476268 ERVV-2B6SEH9 535 aa22.76■■□□□ 1.23
RPL13A-206ENST00000476268 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
RPL13A-206ENST00000476268 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
RPL13A-206ENST00000476268 CHPF2Q9P2E5 772 aa22.76■■□□□ 1.23
RPL13A-206ENST00000476268 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
RPL13A-206ENST00000476268 F6X3S4 739 aa22.75■■□□□ 1.23
RPL13A-206ENST00000476268 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
RPL13A-206ENST00000476268 DBF4Q9UBU7 674 aaPredicted RBP22.75■■□□□ 1.23
RPL13A-206ENST00000476268 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
RPL13A-206ENST00000476268 PXDNLA1KZ92 1463 aa22.75■■□□□ 1.23
RPL13A-206ENST00000476268 SLC4A10Q6U841 1118 aa22.75■■□□□ 1.23
RPL13A-206ENST00000476268 TTC5Q8N0Z6 440 aa22.75■■□□□ 1.23
RPL13A-206ENST00000476268 WNK3Q9BYP7 1800 aa22.74■■□□□ 1.23
RPL13A-206ENST00000476268 C5P01031 1676 aa22.74■■□□□ 1.23
RPL13A-206ENST00000476268 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
RPL13A-206ENST00000476268 SMC5Q8IY18 1101 aa22.73■■□□□ 1.23
RPL13A-206ENST00000476268 C1orf115Q9H7X2 142 aa22.73■■□□□ 1.23
RPL13A-206ENST00000476268 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
RPL13A-206ENST00000476268 NUTM2BA6NNL0 878 aaPredicted RBP22.72■■□□□ 1.23
RPL13A-206ENST00000476268 NUTM2EB1AL46 878 aaPredicted RBP22.72■■□□□ 1.23
RPL13A-206ENST00000476268 NUTM2AQ8IVF1 878 aaPredicted RBP22.72■■□□□ 1.23
RPL13A-206ENST00000476268 PDZRN3Q9UPQ7 1066 aa22.72■■□□□ 1.23
RPL13A-206ENST00000476268 RGS3P49796 1198 aa22.71■■□□□ 1.23
RPL13A-206ENST00000476268 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
RPL13A-206ENST00000476268 FMNL2Q96PY5 1086 aa22.71■■□□□ 1.23
RPL13A-206ENST00000476268 PRAMEF22A3QJZ6 481 aa22.71■■□□□ 1.23
RPL13A-206ENST00000476268 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
RPL13A-206ENST00000476268 HYPKQ9NX55 129 aa22.7■■□□□ 1.22
RPL13A-206ENST00000476268 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
RPL13A-206ENST00000476268 CERKQ8TCT0 537 aa22.69■■□□□ 1.22
RPL13A-206ENST00000476268 MEIS3Q99687 375 aa22.69■■□□□ 1.22
RPL13A-206ENST00000476268 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
RPL13A-206ENST00000476268 JCADQ9P266 1359 aa22.69■■□□□ 1.22
RPL13A-206ENST00000476268 DDX21Q9NR30 783 aaKnown RBP eCLIP22.68■■□□□ 1.22
RPL13A-206ENST00000476268 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
RPL13A-206ENST00000476268 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
RPL13A-206ENST00000476268 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
RPL13A-206ENST00000476268 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
RPL13A-206ENST00000476268 GCC1Q96CN9 775 aa22.68■■□□□ 1.22
RPL13A-206ENST00000476268 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
RPL13A-206ENST00000476268 SLIT2O94813 1529 aa22.67■■□□□ 1.22
RPL13A-206ENST00000476268 LAMB4A4D0S4 1761 aa22.67■■□□□ 1.22
RPL13A-206ENST00000476268 ANXA1P04083 346 aa22.67■■□□□ 1.22
RPL13A-206ENST00000476268 PDE4AP27815 886 aa22.67■■□□□ 1.22
RPL13A-206ENST00000476268 SPATA31A1Q5TZJ5 1347 aa22.67■■□□□ 1.22
RPL13A-206ENST00000476268 GNAI3P08754 354 aa22.66■■□□□ 1.22
RPL13A-206ENST00000476268 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
RPL13A-206ENST00000476268 ATP10DQ9P241 1426 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms