RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CICQ96RK0 1608 aaPredicted RBP18.08■□□□□ 0.48
MRPL55-228ENST00000476267 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
MRPL55-228ENST00000476267 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
MRPL55-228ENST00000476267 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
MRPL55-228ENST00000476267 PHF14O94880 888 aa18.05■□□□□ 0.48
MRPL55-228ENST00000476267 C1QTNF8P60827 252 aa18.05■□□□□ 0.48
MRPL55-228ENST00000476267 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
MRPL55-228ENST00000476267 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
MRPL55-228ENST00000476267 ERVV-2B6SEH9 535 aa18.03■□□□□ 0.48
MRPL55-228ENST00000476267 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
MRPL55-228ENST00000476267 TJP1Q07157 1748 aa18.03■□□□□ 0.48
MRPL55-228ENST00000476267 ADCY9O60503 1353 aa18.03■□□□□ 0.48
MRPL55-228ENST00000476267 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
MRPL55-228ENST00000476267 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
MRPL55-228ENST00000476267 GNPATO15228 680 aa18.01■□□□□ 0.47
MRPL55-228ENST00000476267 AEBP1Q8IUX7 1158 aa18.01■□□□□ 0.47
MRPL55-228ENST00000476267 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
MRPL55-228ENST00000476267 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
MRPL55-228ENST00000476267 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
MRPL55-228ENST00000476267 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
MRPL55-228ENST00000476267 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-228ENST00000476267 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
MRPL55-228ENST00000476267 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
MRPL55-228ENST00000476267 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-228ENST00000476267 IL13P35225 146 aa17.98■□□□□ 0.47
MRPL55-228ENST00000476267 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-228ENST00000476267 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-228ENST00000476267 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
MRPL55-228ENST00000476267 PXDNLA1KZ92 1463 aa17.98■□□□□ 0.47
MRPL55-228ENST00000476267 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
MRPL55-228ENST00000476267 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
MRPL55-228ENST00000476267 N4BP2Q86UW6 1770 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-228ENST00000476267 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
MRPL55-228ENST00000476267 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
MRPL55-228ENST00000476267 MRC1P22897 1456 aa17.96■□□□□ 0.47
MRPL55-228ENST00000476267 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
MRPL55-228ENST00000476267 MMP10P09238 476 aa17.95■□□□□ 0.46
MRPL55-228ENST00000476267 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-228ENST00000476267 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
MRPL55-228ENST00000476267 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
MRPL55-228ENST00000476267 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
MRPL55-228ENST00000476267 ADRA2BP18089 450 aa17.94■□□□□ 0.46
MRPL55-228ENST00000476267 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
MRPL55-228ENST00000476267 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
MRPL55-228ENST00000476267 ARHGEF1Q92888 912 aaKnown RBP17.94■□□□□ 0.46
MRPL55-228ENST00000476267 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
MRPL55-228ENST00000476267 RPS6KA4O75676 772 aa17.93■□□□□ 0.46
MRPL55-228ENST00000476267 MTHFSP49914 203 aa17.93■□□□□ 0.46
MRPL55-228ENST00000476267 CABP4P57796 275 aa17.93■□□□□ 0.46
MRPL55-228ENST00000476267 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
MRPL55-228ENST00000476267 GYS1P13807 737 aa17.92■□□□□ 0.46
MRPL55-228ENST00000476267 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
MRPL55-228ENST00000476267 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
MRPL55-228ENST00000476267 NFATC2IPQ8NCF5 419 aa17.91■□□□□ 0.46
MRPL55-228ENST00000476267 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
MRPL55-228ENST00000476267 KCPQ6ZWJ8 1503 aa17.9■□□□□ 0.46
MRPL55-228ENST00000476267 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
MRPL55-228ENST00000476267 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
MRPL55-228ENST00000476267 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-228ENST00000476267 TGFB2P61812 414 aa17.89■□□□□ 0.45
MRPL55-228ENST00000476267 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
MRPL55-228ENST00000476267 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
MRPL55-228ENST00000476267 CRKLP46109 303 aaKnown RBP17.88■□□□□ 0.45
MRPL55-228ENST00000476267 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
MRPL55-228ENST00000476267 RFC4P35249 363 aa17.87■□□□□ 0.45
MRPL55-228ENST00000476267 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
MRPL55-228ENST00000476267 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
MRPL55-228ENST00000476267 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
MRPL55-228ENST00000476267 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
MRPL55-228ENST00000476267 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-228ENST00000476267 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-228ENST00000476267 KCNA3P22001 575 aa17.85■□□□□ 0.45
MRPL55-228ENST00000476267 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
MRPL55-228ENST00000476267 NRXN2Q9P2S2 1712 aa17.85■□□□□ 0.45
MRPL55-228ENST00000476267 NPC1L1Q9UHC9 1359 aa17.84■□□□□ 0.45
MRPL55-228ENST00000476267 A0A0G2JLW4 131 aa17.84■□□□□ 0.45
MRPL55-228ENST00000476267 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
MRPL55-228ENST00000476267 RNMTO43148 476 aaKnown RBP17.83■□□□□ 0.44
MRPL55-228ENST00000476267 HMOX1P09601 288 aa17.83■□□□□ 0.44
MRPL55-228ENST00000476267 DPEP1P16444 411 aa17.83■□□□□ 0.44
MRPL55-228ENST00000476267 DDR1Q08345 913 aa17.83■□□□□ 0.44
MRPL55-228ENST00000476267 FKBP8Q14318 412 aa17.83■□□□□ 0.44
MRPL55-228ENST00000476267 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
MRPL55-228ENST00000476267 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
MRPL55-228ENST00000476267 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-228ENST00000476267 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
MRPL55-228ENST00000476267 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
MRPL55-228ENST00000476267 ZNF526Q8TF50 670 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-228ENST00000476267 KIF3CO14782 793 aa17.81■□□□□ 0.44
MRPL55-228ENST00000476267 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
MRPL55-228ENST00000476267 DLEC1Q9Y238 1755 aa17.81■□□□□ 0.44
MRPL55-228ENST00000476267 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
MRPL55-228ENST00000476267 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
MRPL55-228ENST00000476267 TM4SF1P30408 202 aa17.8■□□□□ 0.44
MRPL55-228ENST00000476267 SLC39A6Q13433 755 aa17.8■□□□□ 0.44
MRPL55-228ENST00000476267 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
MRPL55-228ENST00000476267 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
MRPL55-228ENST00000476267 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
MRPL55-228ENST00000476267 COL15A1P39059 1388 aa17.78■□□□□ 0.44
MRPL55-228ENST00000476267 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms