RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 C1orf141Q5JVX7 400 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 ITGB4P16144 1822 aa11.46□□□□□ -0.57
SATB1-213ENST00000476178 C5P01031 1676 aa11.46□□□□□ -0.57
SATB1-213ENST00000476178 YBX3P16989 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
SATB1-213ENST00000476178 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
SATB1-213ENST00000476178 AMIGO3Q86WK7 504 aa11.46□□□□□ -0.57
SATB1-213ENST00000476178 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
SATB1-213ENST00000476178 IL13P35225 146 aa11.45□□□□□ -0.58
SATB1-213ENST00000476178 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
SATB1-213ENST00000476178 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
SATB1-213ENST00000476178 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
SATB1-213ENST00000476178 CHD4Q14839 1912 aa11.45□□□□□ -0.58
SATB1-213ENST00000476178 C4BP0C0L5 1744 aa11.44□□□□□ -0.58
SATB1-213ENST00000476178 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
SATB1-213ENST00000476178 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
SATB1-213ENST00000476178 PTCD1O75127 700 aaKnown RBP11.43□□□□□ -0.58
SATB1-213ENST00000476178 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
SATB1-213ENST00000476178 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
SATB1-213ENST00000476178 TAF1LQ8IZX4 1826 aa11.43□□□□□ -0.58
SATB1-213ENST00000476178 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
SATB1-213ENST00000476178 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
SATB1-213ENST00000476178 MMP10P09238 476 aa11.42□□□□□ -0.58
SATB1-213ENST00000476178 RFC4P35249 363 aa11.42□□□□□ -0.58
SATB1-213ENST00000476178 C1QTNF8P60827 252 aa11.42□□□□□ -0.58
SATB1-213ENST00000476178 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
SATB1-213ENST00000476178 NLGN1Q8N2Q7 840 aa11.42□□□□□ -0.58
SATB1-213ENST00000476178 KDRP35968 1356 aa11.41□□□□□ -0.58
SATB1-213ENST00000476178 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
SATB1-213ENST00000476178 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
SATB1-213ENST00000476178 RC3H1Q5TC82 1133 aaKnown RBP11.41□□□□□ -0.58
SATB1-213ENST00000476178 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
SATB1-213ENST00000476178 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
SATB1-213ENST00000476178 RPS6KA4O75676 772 aa11.4□□□□□ -0.58
SATB1-213ENST00000476178 HMOX1P09601 288 aa11.4□□□□□ -0.58
SATB1-213ENST00000476178 ADRA2BP18089 450 aa11.4□□□□□ -0.58
SATB1-213ENST00000476178 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
SATB1-213ENST00000476178 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
SATB1-213ENST00000476178 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
SATB1-213ENST00000476178 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
SATB1-213ENST00000476178 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
SATB1-213ENST00000476178 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
SATB1-213ENST00000476178 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
SATB1-213ENST00000476178 A0A0G2JLW4 131 aa11.37□□□□□ -0.59
SATB1-213ENST00000476178 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
SATB1-213ENST00000476178 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
SATB1-213ENST00000476178 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
SATB1-213ENST00000476178 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
SATB1-213ENST00000476178 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
SATB1-213ENST00000476178 GYS1P13807 737 aa11.36□□□□□ -0.59
SATB1-213ENST00000476178 TGFB2P61812 414 aa11.36□□□□□ -0.59
SATB1-213ENST00000476178 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
SATB1-213ENST00000476178 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
SATB1-213ENST00000476178 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
SATB1-213ENST00000476178 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
SATB1-213ENST00000476178 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
SATB1-213ENST00000476178 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
SATB1-213ENST00000476178 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
SATB1-213ENST00000476178 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
SATB1-213ENST00000476178 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
SATB1-213ENST00000476178 ZPR1O75312 459 aa11.34□□□□□ -0.59
SATB1-213ENST00000476178 DPEP1P16444 411 aa11.34□□□□□ -0.59
SATB1-213ENST00000476178 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
SATB1-213ENST00000476178 FCHSD2O94868 740 aa11.33□□□□□ -0.6
SATB1-213ENST00000476178 FKBP8Q14318 412 aa11.33□□□□□ -0.6
SATB1-213ENST00000476178 INTS5Q6P9B9 1019 aaKnown RBP11.33□□□□□ -0.6
SATB1-213ENST00000476178 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
SATB1-213ENST00000476178 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
SATB1-213ENST00000476178 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
SATB1-213ENST00000476178 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
SATB1-213ENST00000476178 PPP2R1AP30153 589 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 TEFQ10587 303 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
SATB1-213ENST00000476178 ZNF831Q5JPB2 1677 aa11.3□□□□□ -0.6
SATB1-213ENST00000476178 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
SATB1-213ENST00000476178 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
SATB1-213ENST00000476178 GAS2L2Q8NHY3 880 aa11.3□□□□□ -0.6
SATB1-213ENST00000476178 C10orf71Q711Q0 1435 aa11.29□□□□□ -0.6
SATB1-213ENST00000476178 MYH14Q7Z406 1995 aaKnown RBP11.29□□□□□ -0.6
SATB1-213ENST00000476178 STARD3NLO95772 234 aa11.29□□□□□ -0.6
SATB1-213ENST00000476178 DDR1Q08345 913 aa11.29□□□□□ -0.6
SATB1-213ENST00000476178 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
SATB1-213ENST00000476178 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
SATB1-213ENST00000476178 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
SATB1-213ENST00000476178 SOS1Q07889 1333 aaPredicted RBP11.29□□□□□ -0.6
SATB1-213ENST00000476178 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 UTRNP46939 3433 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 TM4SF1P30408 202 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 CHRNA5P30532 468 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
SATB1-213ENST00000476178 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 NARFQ9UHQ1 456 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
SATB1-213ENST00000476178 ZNF330Q9Y3S2 320 aaPredicted RBP11.28□□□□□ -0.6
SATB1-213ENST00000476178 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms