RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 MTHFSP49914 203 aa19.25■□□□□ 0.67
SLC48A1-204ENST00000476104 CABP4P57796 275 aa19.25■□□□□ 0.67
SLC48A1-204ENST00000476104 LINC00116Q8NCU8 138 aa19.25■□□□□ 0.67
SLC48A1-204ENST00000476104 SSFA2P28290 1259 aa19.24■□□□□ 0.67
SLC48A1-204ENST00000476104 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
SLC48A1-204ENST00000476104 GNPATO15228 680 aa19.23■□□□□ 0.67
SLC48A1-204ENST00000476104 ITPK1Q13572 414 aa19.23■□□□□ 0.67
SLC48A1-204ENST00000476104 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
SLC48A1-204ENST00000476104 NLGN2Q8NFZ4 835 aa19.23■□□□□ 0.67
SLC48A1-204ENST00000476104 PER1O15534 1290 aaPredicted RBP19.21■□□□□ 0.67
SLC48A1-204ENST00000476104 CHD4Q14839 1912 aa19.21■□□□□ 0.67
SLC48A1-204ENST00000476104 KDRP35968 1356 aa19.2■□□□□ 0.66
SLC48A1-204ENST00000476104 SMIM5Q71RC9 77 aa19.2■□□□□ 0.66
SLC48A1-204ENST00000476104 AMIGO3Q86WK7 504 aa19.2■□□□□ 0.66
SLC48A1-204ENST00000476104 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
SLC48A1-204ENST00000476104 UBR3Q6ZT12 1888 aa19.2■□□□□ 0.66
SLC48A1-204ENST00000476104 KDM6AO15550 1401 aaPredicted RBP19.19■□□□□ 0.66
SLC48A1-204ENST00000476104 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
SLC48A1-204ENST00000476104 RTCBQ9Y3I0 505 aaKnown RBP19.19■□□□□ 0.66
SLC48A1-204ENST00000476104 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
SLC48A1-204ENST00000476104 GRIN3BO60391 1043 aa19.17■□□□□ 0.66
SLC48A1-204ENST00000476104 HMOX1P09601 288 aa19.17■□□□□ 0.66
SLC48A1-204ENST00000476104 TRAPPC3LQ5T215 181 aa19.17■□□□□ 0.66
SLC48A1-204ENST00000476104 ZNF784Q8NCA9 323 aaPredicted RBP19.17■□□□□ 0.66
SLC48A1-204ENST00000476104 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
SLC48A1-204ENST00000476104 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
SLC48A1-204ENST00000476104 AKAP4Q5JQC9 854 aa19.16■□□□□ 0.66
SLC48A1-204ENST00000476104 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
SLC48A1-204ENST00000476104 SLC4A9Q96Q91 983 aa19.15■□□□□ 0.66
SLC48A1-204ENST00000476104 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
SLC48A1-204ENST00000476104 CNTNAP4Q9C0A0 1308 aa19.14■□□□□ 0.65
SLC48A1-204ENST00000476104 YBX3P16989 372 aaKnown RBP eCLIP19.13■□□□□ 0.653e-12■□□□□ 10.6
SLC48A1-204ENST00000476104 ADRA2BP18089 450 aa19.13■□□□□ 0.65
SLC48A1-204ENST00000476104 ZNF831Q5JPB2 1677 aa19.12■□□□□ 0.65
SLC48A1-204ENST00000476104 RPS6KA4O75676 772 aa19.12■□□□□ 0.65
SLC48A1-204ENST00000476104 RFC4P35249 363 aa19.12■□□□□ 0.65
SLC48A1-204ENST00000476104 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
SLC48A1-204ENST00000476104 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
SLC48A1-204ENST00000476104 MMP10P09238 476 aa19.11■□□□□ 0.65
SLC48A1-204ENST00000476104 ARHGEF1Q92888 912 aaKnown RBP19.11■□□□□ 0.65
SLC48A1-204ENST00000476104 SLC52A2Q9HAB3 445 aa19.11■□□□□ 0.65
SLC48A1-204ENST00000476104 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
SLC48A1-204ENST00000476104 LGR6Q9HBX8 967 aa19.1■□□□□ 0.65
SLC48A1-204ENST00000476104 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
SLC48A1-204ENST00000476104 CRKLP46109 303 aaKnown RBP19.09■□□□□ 0.65
SLC48A1-204ENST00000476104 MTHFSDQ2M296 383 aaKnown RBP19.09■□□□□ 0.65
SLC48A1-204ENST00000476104 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
SLC48A1-204ENST00000476104 COL5A3P25940 1745 aaPredicted RBP19.07■□□□□ 0.64
SLC48A1-204ENST00000476104 MYH14Q7Z406 1995 aaKnown RBP19.05■□□□□ 0.64
SLC48A1-204ENST00000476104 GYS1P13807 737 aa19.05■□□□□ 0.64
SLC48A1-204ENST00000476104 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
SLC48A1-204ENST00000476104 WWC3Q9ULE0 1092 aa19.05■□□□□ 0.64
SLC48A1-204ENST00000476104 PARP3Q9Y6F1 533 aa19.05■□□□□ 0.64
SLC48A1-204ENST00000476104 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
SLC48A1-204ENST00000476104 DNAJC10Q8IXB1 793 aa19.04■□□□□ 0.64
SLC48A1-204ENST00000476104 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
SLC48A1-204ENST00000476104 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
SLC48A1-204ENST00000476104 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
SLC48A1-204ENST00000476104 MRC1P22897 1456 aa19.03■□□□□ 0.64
SLC48A1-204ENST00000476104 UTRNP46939 3433 aa19.02■□□□□ 0.64
SLC48A1-204ENST00000476104 GNAT3A8MTJ3 354 aa19.02■□□□□ 0.64
SLC48A1-204ENST00000476104 TEFQ10587 303 aa19.02■□□□□ 0.64
SLC48A1-204ENST00000476104 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
SLC48A1-204ENST00000476104 CICQ96RK0 1608 aaPredicted RBP19.01■□□□□ 0.63
SLC48A1-204ENST00000476104 TGFB2P61812 414 aa19.01■□□□□ 0.63
SLC48A1-204ENST00000476104 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
SLC48A1-204ENST00000476104 SRP68Q9UHB9 627 aaKnown RBP19.01■□□□□ 0.63
SLC48A1-204ENST00000476104 USP42Q9H9J4 1324 aaKnown RBP19■□□□□ 0.63
SLC48A1-204ENST00000476104 ZPR1O75312 459 aa19■□□□□ 0.63
SLC48A1-204ENST00000476104 TJP1Q07157 1748 aa19■□□□□ 0.63
SLC48A1-204ENST00000476104 GIGYF1O75420 1035 aaPredicted RBP18.99■□□□□ 0.63
SLC48A1-204ENST00000476104 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
SLC48A1-204ENST00000476104 VSIG10Q8N0Z9 540 aa18.99■□□□□ 0.63
SLC48A1-204ENST00000476104 VIRMAQ69YN4 1812 aaKnown RBP18.99■□□□□ 0.63
SLC48A1-204ENST00000476104 C4AP0C0L4 1744 aa18.98■□□□□ 0.63
SLC48A1-204ENST00000476104 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
SLC48A1-204ENST00000476104 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
SLC48A1-204ENST00000476104 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
SLC48A1-204ENST00000476104 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
SLC48A1-204ENST00000476104 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 C1QTNF8P60827 252 aa18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 FKBP8Q14318 412 aa18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 SOS1Q07889 1333 aaPredicted RBP18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 PXDNLA1KZ92 1463 aa18.97■□□□□ 0.63
SLC48A1-204ENST00000476104 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
SLC48A1-204ENST00000476104 STARD3NLO95772 234 aa18.96■□□□□ 0.63
SLC48A1-204ENST00000476104 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 KCPQ6ZWJ8 1503 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 ATP10DQ9P241 1426 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 DPEP1P16444 411 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 USPL1Q5W0Q7 1092 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 RSPH6AQ9H0K4 717 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
SLC48A1-204ENST00000476104 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
SLC48A1-204ENST00000476104 ZNF790Q6PG37 636 aa18.94■□□□□ 0.62
SLC48A1-204ENST00000476104 PHACTR3Q96KR7 559 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms