RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 JMYQ8N9B5 988 aa21.36■■□□□ 1.01
NME1-206ENST00000475573 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
NME1-206ENST00000475573 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
NME1-206ENST00000475573 ARHGAP27Q6ZUM4 889 aa21.35■■□□□ 1.01
NME1-206ENST00000475573 C16orf71Q8IYS4 520 aaPredicted RBP21.35■■□□□ 1.01
NME1-206ENST00000475573 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
NME1-206ENST00000475573 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
NME1-206ENST00000475573 PCNTO95613 3336 aa21.34■■□□□ 1.01
NME1-206ENST00000475573 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
NME1-206ENST00000475573 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
NME1-206ENST00000475573 ATP6V1AP38606 617 aa21.34■■□□□ 1.01
NME1-206ENST00000475573 FSTL1Q12841 308 aa21.34■■□□□ 1.01
NME1-206ENST00000475573 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
NME1-206ENST00000475573 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
NME1-206ENST00000475573 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
NME1-206ENST00000475573 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
NME1-206ENST00000475573 FCHSD2O94868 740 aa21.32■■□□□ 1
NME1-206ENST00000475573 TMF1P82094 1093 aa21.32■■□□□ 1
NME1-206ENST00000475573 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
NME1-206ENST00000475573 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
NME1-206ENST00000475573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 14e-7■□□□□ 9.1
NME1-206ENST00000475573 RTCBQ9Y3I0 505 aaKnown RBP21.31■■□□□ 1
NME1-206ENST00000475573 KDRP35968 1356 aa21.31■■□□□ 1
NME1-206ENST00000475573 DPEP1P16444 411 aa21.3■■□□□ 1
NME1-206ENST00000475573 HTRA3P83110 453 aa21.3■■□□□ 1
NME1-206ENST00000475573 TRAPPC3LQ5T215 181 aa21.3■■□□□ 1
NME1-206ENST00000475573 C9orf131Q5VYM1 1079 aa21.3■■□□□ 1
NME1-206ENST00000475573 TONSLQ96HA7 1378 aa21.3■■□□□ 1
NME1-206ENST00000475573 TNRC6CQ9HCJ0 1690 aaKnown RBP21.3■■□□□ 1
NME1-206ENST00000475573 ADRA2BP18089 450 aa21.29■■□□□ 1
NME1-206ENST00000475573 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
NME1-206ENST00000475573 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
NME1-206ENST00000475573 ATG3Q9NT62 314 aa21.28■■□□□ 1
NME1-206ENST00000475573 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
NME1-206ENST00000475573 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
NME1-206ENST00000475573 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
NME1-206ENST00000475573 TNS4Q8IZW8 715 aa21.27■■□□□ 1
NME1-206ENST00000475573 CAPN15O75808 1086 aa21.26■□□□□ 0.99
NME1-206ENST00000475573 GYS1P13807 737 aa21.26■□□□□ 0.99
NME1-206ENST00000475573 PHKG2P15735 406 aa21.26■□□□□ 0.99
NME1-206ENST00000475573 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
NME1-206ENST00000475573 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
NME1-206ENST00000475573 ARHGEF1Q92888 912 aaKnown RBP21.25■□□□□ 0.99
NME1-206ENST00000475573 CNTNAP4Q9C0A0 1308 aa21.25■□□□□ 0.99
NME1-206ENST00000475573 KCNA3P22001 575 aa21.24■□□□□ 0.99
NME1-206ENST00000475573 PRELPP51888 382 aa21.24■□□□□ 0.99
NME1-206ENST00000475573 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
NME1-206ENST00000475573 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
NME1-206ENST00000475573 RFC4P35249 363 aa21.23■□□□□ 0.99
NME1-206ENST00000475573 SBF1O95248 1867 aa21.23■□□□□ 0.99
NME1-206ENST00000475573 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
NME1-206ENST00000475573 EYA1Q99502 592 aa21.22■□□□□ 0.99
NME1-206ENST00000475573 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
NME1-206ENST00000475573 MYH14Q7Z406 1995 aaKnown RBP21.22■□□□□ 0.99
NME1-206ENST00000475573 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
NME1-206ENST00000475573 PPM1GO15355 546 aaPredicted RBP21.21■□□□□ 0.99
NME1-206ENST00000475573 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
NME1-206ENST00000475573 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
NME1-206ENST00000475573 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
NME1-206ENST00000475573 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
NME1-206ENST00000475573 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
NME1-206ENST00000475573 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
NME1-206ENST00000475573 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
NME1-206ENST00000475573 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
NME1-206ENST00000475573 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
NME1-206ENST00000475573 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
NME1-206ENST00000475573 USP42Q9H9J4 1324 aaKnown RBP21.14■□□□□ 0.97
NME1-206ENST00000475573 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
NME1-206ENST00000475573 HSPA1AP0DMV8 641 aaKnown RBP21.13■□□□□ 0.97
NME1-206ENST00000475573 HSPA1BP0DMV9 641 aaKnown RBP21.13■□□□□ 0.97
NME1-206ENST00000475573 DDR1Q08345 913 aa21.13■□□□□ 0.97
NME1-206ENST00000475573 CHRNA5P30532 468 aa21.12■□□□□ 0.97
NME1-206ENST00000475573 FKBP8Q14318 412 aa21.12■□□□□ 0.97
NME1-206ENST00000475573 CRKLP46109 303 aaKnown RBP21.11■□□□□ 0.97
NME1-206ENST00000475573 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
NME1-206ENST00000475573 SRP68Q9UHB9 627 aaKnown RBP21.11■□□□□ 0.97
NME1-206ENST00000475573 EIF4A2Q14240 407 aaKnown RBP21.1■□□□□ 0.97
NME1-206ENST00000475573 TJP1Q07157 1748 aa21.09■□□□□ 0.97
NME1-206ENST00000475573 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
NME1-206ENST00000475573 VEGFAP15692 232 aaPredicted RBP21.09■□□□□ 0.97
NME1-206ENST00000475573 CABP4P57796 275 aa21.09■□□□□ 0.97
NME1-206ENST00000475573 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
NME1-206ENST00000475573 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.97
NME1-206ENST00000475573 GLTPD2A6NH11 291 aa21.08■□□□□ 0.97
NME1-206ENST00000475573 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.97
NME1-206ENST00000475573 RASSF7Q02833 373 aa21.08■□□□□ 0.97
NME1-206ENST00000475573 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
NME1-206ENST00000475573 LMNB1P20700 586 aa21.07■□□□□ 0.96
NME1-206ENST00000475573 PLEKHO1Q53GL0 409 aaPredicted RBP21.06■□□□□ 0.96
NME1-206ENST00000475573 TM4SF1P30408 202 aa21.05■□□□□ 0.96
NME1-206ENST00000475573 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
NME1-206ENST00000475573 AFDNP55196 1824 aaKnown RBP21.05■□□□□ 0.96
NME1-206ENST00000475573 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
NME1-206ENST00000475573 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
NME1-206ENST00000475573 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
NME1-206ENST00000475573 ZPR1O75312 459 aa21.02■□□□□ 0.96
NME1-206ENST00000475573 MTHFSP49914 203 aa21.02■□□□□ 0.96
NME1-206ENST00000475573 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
NME1-206ENST00000475573 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
NME1-206ENST00000475573 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms