RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ARXQ96QS3 562 aa20.99■□□□□ 0.95
CPSF3-203ENST00000475482 SYT17Q9BSW7 474 aa20.99■□□□□ 0.95
CPSF3-203ENST00000475482 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
CPSF3-203ENST00000475482 FLAD1Q8NFF5 587 aa20.98■□□□□ 0.95
CPSF3-203ENST00000475482 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
CPSF3-203ENST00000475482 ITPK1Q13572 414 aa20.97■□□□□ 0.95
CPSF3-203ENST00000475482 C1orf141Q5JVX7 400 aa20.97■□□□□ 0.95
CPSF3-203ENST00000475482 AMIGO3Q86WK7 504 aa20.97■□□□□ 0.95
CPSF3-203ENST00000475482 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
CPSF3-203ENST00000475482 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
CPSF3-203ENST00000475482 HMOX1P09601 288 aa20.96■□□□□ 0.95
CPSF3-203ENST00000475482 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
CPSF3-203ENST00000475482 SLC4A9Q96Q91 983 aa20.96■□□□□ 0.95
CPSF3-203ENST00000475482 CABP4P57796 275 aa20.95■□□□□ 0.94
CPSF3-203ENST00000475482 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
CPSF3-203ENST00000475482 COL5A3P25940 1745 aaPredicted RBP20.94■□□□□ 0.94
CPSF3-203ENST00000475482 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
CPSF3-203ENST00000475482 POLD1P28340 1107 aa20.93■□□□□ 0.94
CPSF3-203ENST00000475482 MTHFSDQ2M296 383 aaKnown RBP20.93■□□□□ 0.94
CPSF3-203ENST00000475482 NFATC2IPQ8NCF5 419 aa20.93■□□□□ 0.94
CPSF3-203ENST00000475482 AK7Q96M32 723 aa20.93■□□□□ 0.94
CPSF3-203ENST00000475482 MRC1P22897 1456 aa20.93■□□□□ 0.94
CPSF3-203ENST00000475482 SSFA2P28290 1259 aa20.92■□□□□ 0.94
CPSF3-203ENST00000475482 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
CPSF3-203ENST00000475482 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
CPSF3-203ENST00000475482 PPP2R1AP30153 589 aa20.91■□□□□ 0.94
CPSF3-203ENST00000475482 MYH14Q7Z406 1995 aaKnown RBP20.91■□□□□ 0.94
CPSF3-203ENST00000475482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
CPSF3-203ENST00000475482 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
CPSF3-203ENST00000475482 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
CPSF3-203ENST00000475482 RC3H1Q5TC82 1133 aaKnown RBP20.89■□□□□ 0.93
CPSF3-203ENST00000475482 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
CPSF3-203ENST00000475482 SLC52A2Q9HAB3 445 aa20.89■□□□□ 0.93
CPSF3-203ENST00000475482 UTRNP46939 3433 aa20.88■□□□□ 0.93
CPSF3-203ENST00000475482 MSH5O43196 834 aa20.88■□□□□ 0.93
CPSF3-203ENST00000475482 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
CPSF3-203ENST00000475482 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
CPSF3-203ENST00000475482 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
CPSF3-203ENST00000475482 GNPATO15228 680 aa20.87■□□□□ 0.93
CPSF3-203ENST00000475482 RALBP1Q15311 655 aa20.87■□□□□ 0.93
CPSF3-203ENST00000475482 CFAP53Q96M91 514 aa20.87■□□□□ 0.93
CPSF3-203ENST00000475482 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
CPSF3-203ENST00000475482 TJP1Q07157 1748 aa20.87■□□□□ 0.93
CPSF3-203ENST00000475482 DCAF8L1A6NGE4 600 aa20.86■□□□□ 0.93
CPSF3-203ENST00000475482 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
CPSF3-203ENST00000475482 PHF14O94880 888 aa20.85■□□□□ 0.93
CPSF3-203ENST00000475482 RSPH6AQ9H0K4 717 aa20.84■□□□□ 0.93
CPSF3-203ENST00000475482 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.93
CPSF3-203ENST00000475482 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
CPSF3-203ENST00000475482 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
CPSF3-203ENST00000475482 UBR2Q8IWV8 1755 aa20.82■□□□□ 0.92
CPSF3-203ENST00000475482 RPS6KA4O75676 772 aa20.82■□□□□ 0.92
CPSF3-203ENST00000475482 ADRA2BP18089 450 aa20.82■□□□□ 0.92
CPSF3-203ENST00000475482 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
CPSF3-203ENST00000475482 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
CPSF3-203ENST00000475482 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
CPSF3-203ENST00000475482 CHD4Q14839 1912 aa20.81■□□□□ 0.92
CPSF3-203ENST00000475482 IL17REQ8NFR9 667 aa20.81■□□□□ 0.92
CPSF3-203ENST00000475482 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
CPSF3-203ENST00000475482 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 TRAPPC3LQ5T215 181 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 C4AP0C0L4 1744 aa20.8■□□□□ 0.92
CPSF3-203ENST00000475482 FCHSD2O94868 740 aa20.79■□□□□ 0.92
CPSF3-203ENST00000475482 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
CPSF3-203ENST00000475482 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
CPSF3-203ENST00000475482 CEMIPQ8WUJ3 1361 aa20.79■□□□□ 0.92
CPSF3-203ENST00000475482 GOLGB1Q14789 3259 aaKnown RBP20.79■□□□□ 0.92
CPSF3-203ENST00000475482 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
CPSF3-203ENST00000475482 U2AF1L5P0DN76 240 aaPredicted RBP20.77■□□□□ 0.92
CPSF3-203ENST00000475482 YY1P25490 414 aa20.77■□□□□ 0.92
CPSF3-203ENST00000475482 U2AF1Q01081 240 aaKnown RBP eCLIP20.77■□□□□ 0.92
CPSF3-203ENST00000475482 INTS5Q6P9B9 1019 aaKnown RBP20.77■□□□□ 0.92
CPSF3-203ENST00000475482 VSIG10Q8N0Z9 540 aa20.77■□□□□ 0.92
CPSF3-203ENST00000475482 KLHL34Q8N239 644 aa20.77■□□□□ 0.92
CPSF3-203ENST00000475482 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
CPSF3-203ENST00000475482 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
CPSF3-203ENST00000475482 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
CPSF3-203ENST00000475482 KIF13BQ9NQT8 1826 aa20.75■□□□□ 0.91
CPSF3-203ENST00000475482 CYP19A1P11511 503 aaPredicted RBP20.74■□□□□ 0.91
CPSF3-203ENST00000475482 GYS1P13807 737 aa20.74■□□□□ 0.91
CPSF3-203ENST00000475482 MMP10P09238 476 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 RFC4P35249 363 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 TEFQ10587 303 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 GPR162Q16538 588 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 CCDC87Q9NVE4 849 aa20.72■□□□□ 0.91
CPSF3-203ENST00000475482 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
CPSF3-203ENST00000475482 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
CPSF3-203ENST00000475482 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
CPSF3-203ENST00000475482 MRS2Q9HD23 443 aa20.7■□□□□ 0.9
CPSF3-203ENST00000475482 USP42Q9H9J4 1324 aaKnown RBP20.7■□□□□ 0.9
CPSF3-203ENST00000475482 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
CPSF3-203ENST00000475482 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
CPSF3-203ENST00000475482 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
CPSF3-203ENST00000475482 HEG1Q9ULI3 1381 aa20.69■□□□□ 0.9
CPSF3-203ENST00000475482 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
CPSF3-203ENST00000475482 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms