RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 RNMTO43148 476 aaKnown RBP19.28■□□□□ 0.68
RPUSD3-215ENST00000475470 FLIIQ13045 1269 aa19.28■□□□□ 0.68
RPUSD3-215ENST00000475470 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
RPUSD3-215ENST00000475470 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
RPUSD3-215ENST00000475470 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 RAPGEF4Q8WZA2 1011 aa19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 FKBP5Q13451 457 aaPredicted RBP19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
RPUSD3-215ENST00000475470 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
RPUSD3-215ENST00000475470 MEIS3Q99687 375 aa19.26■□□□□ 0.67
RPUSD3-215ENST00000475470 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
RPUSD3-215ENST00000475470 SEC24BO95487 1268 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 CHMP4AQ9BY43 222 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 COL18A1P39060 1754 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
RPUSD3-215ENST00000475470 HOXB7P09629 217 aa19.24■□□□□ 0.67
RPUSD3-215ENST00000475470 KCNQ3O43525 872 aa19.24■□□□□ 0.67
RPUSD3-215ENST00000475470 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
RPUSD3-215ENST00000475470 EIF2S2P20042 333 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-215ENST00000475470 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
RPUSD3-215ENST00000475470 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-215ENST00000475470 CPDO75976 1380 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 ABCC6O95255 1503 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 DCTPP1Q9H773 170 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 CRYBG1Q9Y4K1 1723 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
RPUSD3-215ENST00000475470 SOS2Q07890 1332 aaPredicted RBP19.2■□□□□ 0.66
RPUSD3-215ENST00000475470 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
RPUSD3-215ENST00000475470 DAXXQ9UER7 740 aaPredicted RBP19.2■□□□□ 0.66
RPUSD3-215ENST00000475470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.66
RPUSD3-215ENST00000475470 HMMRO75330 724 aa19.18■□□□□ 0.66
RPUSD3-215ENST00000475470 GNAI2P04899 355 aa19.18■□□□□ 0.66
RPUSD3-215ENST00000475470 CHPF2Q9P2E5 772 aa19.18■□□□□ 0.66
RPUSD3-215ENST00000475470 GNAI3P08754 354 aa19.17■□□□□ 0.66
RPUSD3-215ENST00000475470 PRDM11Q9NQV5 511 aa19.17■□□□□ 0.66
RPUSD3-215ENST00000475470 MEGF6O75095 1541 aa19.17■□□□□ 0.66
RPUSD3-215ENST00000475470 PHKG2P15735 406 aa19.17■□□□□ 0.66
RPUSD3-215ENST00000475470 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
RPUSD3-215ENST00000475470 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
RPUSD3-215ENST00000475470 ADAMTS7Q9UKP4 1686 aa19.16■□□□□ 0.66
RPUSD3-215ENST00000475470 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
RPUSD3-215ENST00000475470 BMP2KLQ5H9B9 411 aa19.15■□□□□ 0.66
RPUSD3-215ENST00000475470 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
RPUSD3-215ENST00000475470 DBF4Q9UBU7 674 aaPredicted RBP19.15■□□□□ 0.66
RPUSD3-215ENST00000475470 PLEKHG2Q9H7P9 1386 aa19.14■□□□□ 0.65
RPUSD3-215ENST00000475470 SLC52A2Q9HAB3 445 aa19.14■□□□□ 0.65
RPUSD3-215ENST00000475470 TBC1D32Q96NH3 1257 aa19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 HEG1Q9ULI3 1381 aa19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 KDM6AO15550 1401 aaPredicted RBP19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 N4BP2Q86UW6 1770 aaPredicted RBP19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
RPUSD3-215ENST00000475470 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
RPUSD3-215ENST00000475470 ANXA1P04083 346 aa19.12■□□□□ 0.65
RPUSD3-215ENST00000475470 MFAP1P55081 439 aaKnown RBP19.12■□□□□ 0.65
RPUSD3-215ENST00000475470 NFATC2IPQ8NCF5 419 aa19.12■□□□□ 0.65
RPUSD3-215ENST00000475470 SRCIN1Q9C0H9 1055 aa19.12■□□□□ 0.65
RPUSD3-215ENST00000475470 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 APBB1O00213 710 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 ZNF790Q6PG37 636 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 TOM1L2Q6ZVM7 507 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 DCAF5Q96JK2 942 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 PI4KAP2A4QPH2 592 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 UBTFL1P0CB47 393 aaPredicted RBP19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 PI4KAP1Q8N8J0 262 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 DNAAF4Q8WXU2 420 aa19.11■□□□□ 0.65
RPUSD3-215ENST00000475470 CYP27B1O15528 508 aa19.1■□□□□ 0.65
RPUSD3-215ENST00000475470 SLC39A6Q13433 755 aa19.1■□□□□ 0.65
RPUSD3-215ENST00000475470 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
RPUSD3-215ENST00000475470 LRRFIP2Q9Y608 721 aaKnown RBP19.1■□□□□ 0.65
RPUSD3-215ENST00000475470 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
RPUSD3-215ENST00000475470 C16orf71Q8IYS4 520 aaPredicted RBP19.09■□□□□ 0.65
RPUSD3-215ENST00000475470 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.65
RPUSD3-215ENST00000475470 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
RPUSD3-215ENST00000475470 C22orf23Q9BZE7 217 aa19.08■□□□□ 0.64
RPUSD3-215ENST00000475470 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
RPUSD3-215ENST00000475470 HYPKQ9NX55 129 aa19.08■□□□□ 0.64
RPUSD3-215ENST00000475470 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-215ENST00000475470 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
RPUSD3-215ENST00000475470 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
RPUSD3-215ENST00000475470 PNMA6EA0A0J9YXQ4 647 aa19.06■□□□□ 0.64
RPUSD3-215ENST00000475470 ADCY9O60503 1353 aa19.06■□□□□ 0.64
RPUSD3-215ENST00000475470 BECN1Q14457 450 aa19.06■□□□□ 0.64
RPUSD3-215ENST00000475470 TTC5Q8N0Z6 440 aa19.06■□□□□ 0.64
RPUSD3-215ENST00000475470 ABCA3Q99758 1704 aa19.06■□□□□ 0.64
RPUSD3-215ENST00000475470 DDX21Q9NR30 783 aaKnown RBP eCLIP19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 EXOC6BQ9Y2D4 811 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 CABP4P57796 275 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 EVA1CP58658 441 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 NBR1Q14596 966 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 TTC22Q5TAA0 569 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms