RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 TGFB2P61812 414 aa25.13■■□□□ 1.61
RNF220-212ENST00000475378 EMILIN1Q9Y6C2 1016 aa25.13■■□□□ 1.61
RNF220-212ENST00000475378 ATP6V1AP38606 617 aa25.12■■□□□ 1.61
RNF220-212ENST00000475378 TMOD3Q9NYL9 352 aa25.12■■□□□ 1.61
RNF220-212ENST00000475378 SPG7Q9UQ90 795 aa25.12■■□□□ 1.61
RNF220-212ENST00000475378 COL5A3P25940 1745 aaPredicted RBP25.12■■□□□ 1.61
RNF220-212ENST00000475378 C4AP0C0L4 1744 aa25.11■■□□□ 1.61
RNF220-212ENST00000475378 KDRP35968 1356 aa25.1■■□□□ 1.61
RNF220-212ENST00000475378 NMRK2Q9NPI5 230 aa25.1■■□□□ 1.61
RNF220-212ENST00000475378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
RNF220-212ENST00000475378 BCS1LQ9Y276 419 aa25.1■■□□□ 1.61
RNF220-212ENST00000475378 A0A0G2JLW4 131 aa25.09■■□□□ 1.61
RNF220-212ENST00000475378 ATG3Q9NT62 314 aa25.09■■□□□ 1.61
RNF220-212ENST00000475378 MYH14Q7Z406 1995 aaKnown RBP25.08■■□□□ 1.61
RNF220-212ENST00000475378 TMF1P82094 1093 aa25.08■■□□□ 1.61
RNF220-212ENST00000475378 PHKG2P15735 406 aa25.07■■□□□ 1.6
RNF220-212ENST00000475378 NLGN1Q8N2Q7 840 aa25.06■■□□□ 1.6
RNF220-212ENST00000475378 EYA1Q99502 592 aa25.06■■□□□ 1.6
RNF220-212ENST00000475378 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
RNF220-212ENST00000475378 TRAPPC3LQ5T215 181 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 ARHGAP27Q6ZUM4 889 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 IFNL2Q8IZJ0 200 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 RBM46Q8TBY0 533 aaKnown RBP25.05■■□□□ 1.6
RNF220-212ENST00000475378 SLC4A9Q96Q91 983 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 WASHC2AQ641Q2 1341 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 PCNTO95613 3336 aa25.05■■□□□ 1.6
RNF220-212ENST00000475378 DPEP1P16444 411 aa25.04■■□□□ 1.6
RNF220-212ENST00000475378 RTCBQ9Y3I0 505 aaKnown RBP25.04■■□□□ 1.6
RNF220-212ENST00000475378 SBF1O95248 1867 aa25.03■■□□□ 1.6
RNF220-212ENST00000475378 GYS1P13807 737 aa25.02■■□□□ 1.6
RNF220-212ENST00000475378 KCNA3P22001 575 aa25.02■■□□□ 1.6
RNF220-212ENST00000475378 ARHGEF1Q92888 912 aaKnown RBP25.02■■□□□ 1.6
RNF220-212ENST00000475378 CCDC87Q9NVE4 849 aa25.02■■□□□ 1.6
RNF220-212ENST00000475378 PPM1GO15355 546 aaPredicted RBP25.01■■□□□ 1.59
RNF220-212ENST00000475378 FCHSD2O94868 740 aa25.01■■□□□ 1.59
RNF220-212ENST00000475378 ADRA2BP18089 450 aa25.01■■□□□ 1.59
RNF220-212ENST00000475378 RC3H1Q5TC82 1133 aaKnown RBP25.01■■□□□ 1.59
RNF220-212ENST00000475378 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
RNF220-212ENST00000475378 C9orf131Q5VYM1 1079 aa25■■□□□ 1.59
RNF220-212ENST00000475378 JMYQ8N9B5 988 aa25■■□□□ 1.59
RNF220-212ENST00000475378 KLRG1Q96E93 195 aa25■■□□□ 1.59
RNF220-212ENST00000475378 HTRA3P83110 453 aa24.99■■□□□ 1.59
RNF220-212ENST00000475378 CNTNAP4Q9C0A0 1308 aa24.99■■□□□ 1.59
RNF220-212ENST00000475378 TNRC6CQ9HCJ0 1690 aaKnown RBP24.98■■□□□ 1.59
RNF220-212ENST00000475378 KCPQ6ZWJ8 1503 aa24.98■■□□□ 1.59
RNF220-212ENST00000475378 RPS6KA4O75676 772 aa24.97■■□□□ 1.59
RNF220-212ENST00000475378 FSTL1Q12841 308 aa24.97■■□□□ 1.59
RNF220-212ENST00000475378 CDCA8Q53HL2 280 aa24.97■■□□□ 1.59
RNF220-212ENST00000475378 COL13A1Q5TAT6 717 aaPredicted RBP24.97■■□□□ 1.59
RNF220-212ENST00000475378 PARP3Q9Y6F1 533 aa24.96■■□□□ 1.59
RNF220-212ENST00000475378 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
RNF220-212ENST00000475378 RFC4P35249 363 aa24.95■■□□□ 1.58
RNF220-212ENST00000475378 DCAF5Q96JK2 942 aa24.95■■□□□ 1.58
RNF220-212ENST00000475378 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
RNF220-212ENST00000475378 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
RNF220-212ENST00000475378 C16orf71Q8IYS4 520 aaPredicted RBP24.94■■□□□ 1.58
RNF220-212ENST00000475378 PIM2Q9P1W9 311 aa24.93■■□□□ 1.58
RNF220-212ENST00000475378 ADAMTS7Q9UKP4 1686 aa24.92■■□□□ 1.58
RNF220-212ENST00000475378 EIF4A2Q14240 407 aaKnown RBP24.92■■□□□ 1.58
RNF220-212ENST00000475378 KDM2BQ8NHM5 1336 aa24.91■■□□□ 1.58
RNF220-212ENST00000475378 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
RNF220-212ENST00000475378 TJP1Q07157 1748 aa24.91■■□□□ 1.58
RNF220-212ENST00000475378 DALRD3Q5D0E6 543 aaKnown RBP24.89■■□□□ 1.58
RNF220-212ENST00000475378 RRAGCQ9HB90 399 aa24.89■■□□□ 1.58
RNF220-212ENST00000475378 RNF181Q9P0P0 153 aa24.89■■□□□ 1.58
RNF220-212ENST00000475378 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
RNF220-212ENST00000475378 DDR1Q08345 913 aa24.88■■□□□ 1.57
RNF220-212ENST00000475378 FKBP8Q14318 412 aa24.87■■□□□ 1.57
RNF220-212ENST00000475378 SRP68Q9UHB9 627 aaKnown RBP24.87■■□□□ 1.57
RNF220-212ENST00000475378 USP42Q9H9J4 1324 aaKnown RBP24.86■■□□□ 1.57
RNF220-212ENST00000475378 AFDNP55196 1824 aaKnown RBP24.86■■□□□ 1.57
RNF220-212ENST00000475378 CCDC88AQ3V6T2 1871 aa24.85■■□□□ 1.57
RNF220-212ENST00000475378 CRKLP46109 303 aaKnown RBP24.85■■□□□ 1.57
RNF220-212ENST00000475378 CHRNA5P30532 468 aa24.84■■□□□ 1.57
RNF220-212ENST00000475378 DLEC1Q9Y238 1755 aa24.84■■□□□ 1.57
RNF220-212ENST00000475378 CABP4P57796 275 aa24.83■■□□□ 1.57
RNF220-212ENST00000475378 SMC1BQ8NDV3 1235 aa24.83■■□□□ 1.57
RNF220-212ENST00000475378 SCN11AQ9UI33 1791 aa24.82■■□□□ 1.56
RNF220-212ENST00000475378 TNS4Q8IZW8 715 aa24.82■■□□□ 1.56
RNF220-212ENST00000475378 NRXN2Q9P2S2 1712 aa24.81■■□□□ 1.56
RNF220-212ENST00000475378 POLRMTO00411 1230 aaKnown RBP24.81■■□□□ 1.56
RNF220-212ENST00000475378 PTCD1O75127 700 aaKnown RBP24.81■■□□□ 1.56
RNF220-212ENST00000475378 CAPN15O75808 1086 aa24.81■■□□□ 1.56
RNF220-212ENST00000475378 TM4SF1P30408 202 aa24.81■■□□□ 1.56
RNF220-212ENST00000475378 PLEKHO1Q53GL0 409 aaPredicted RBP24.81■■□□□ 1.56
RNF220-212ENST00000475378 ZNF530Q6P9A1 599 aaPredicted RBP24.81■■□□□ 1.56
RNF220-212ENST00000475378 PRELPP51888 382 aa24.8■■□□□ 1.56
RNF220-212ENST00000475378 ZC3H4Q9UPT8 1303 aaKnown RBP24.8■■□□□ 1.56
RNF220-212ENST00000475378 TIAM2Q8IVF5 1701 aa24.79■■□□□ 1.56
RNF220-212ENST00000475378 TNNT2P45379 298 aaPredicted RBP24.78■■□□□ 1.56
RNF220-212ENST00000475378 RASSF7Q02833 373 aa24.78■■□□□ 1.56
RNF220-212ENST00000475378 AMOTQ4VCS5 1084 aa24.78■■□□□ 1.56
RNF220-212ENST00000475378 INTS5Q6P9B9 1019 aaKnown RBP24.78■■□□□ 1.56
RNF220-212ENST00000475378 MTHFSP49914 203 aa24.77■■□□□ 1.56
RNF220-212ENST00000475378 NFATC2IPQ8NCF5 419 aa24.77■■□□□ 1.56
RNF220-212ENST00000475378 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
RNF220-212ENST00000475378 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
RNF220-212ENST00000475378 USPL1Q5W0Q7 1092 aa24.73■■□□□ 1.55
RNF220-212ENST00000475378 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
RNF220-212ENST00000475378 HSPA1AP0DMV8 641 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms