RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
PCGF3-209ENST00000475288 CICQ96RK0 1608 aaPredicted RBP24.58■■□□□ 1.53
PCGF3-209ENST00000475288 ERVV-2B6SEH9 535 aa24.58■■□□□ 1.53
PCGF3-209ENST00000475288 KIF13BQ9NQT8 1826 aa24.58■■□□□ 1.53
PCGF3-209ENST00000475288 HSP90AB1P08238 724 aaKnown RBP24.57■■□□□ 1.52
PCGF3-209ENST00000475288 SMIM5Q71RC9 77 aa24.56■■□□□ 1.52
PCGF3-209ENST00000475288 COL5A3P25940 1745 aaPredicted RBP24.55■■□□□ 1.52
PCGF3-209ENST00000475288 DCAF5Q96JK2 942 aa24.55■■□□□ 1.52
PCGF3-209ENST00000475288 RC3H1Q5TC82 1133 aaKnown RBP24.54■■□□□ 1.52
PCGF3-209ENST00000475288 GPBP1L1Q9HC44 474 aaPredicted RBP24.54■■□□□ 1.52
PCGF3-209ENST00000475288 ADRA2BP18089 450 aa24.53■■□□□ 1.52
PCGF3-209ENST00000475288 KIAA1551Q9HCM1 1747 aa24.52■■□□□ 1.52
PCGF3-209ENST00000475288 RTCBQ9Y3I0 505 aaKnown RBP24.52■■□□□ 1.52
PCGF3-209ENST00000475288 MMP10P09238 476 aa24.51■■□□□ 1.51
PCGF3-209ENST00000475288 TNNT2P45379 298 aaPredicted RBP24.51■■□□□ 1.51
PCGF3-209ENST00000475288 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
PCGF3-209ENST00000475288 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
PCGF3-209ENST00000475288 SLC4A9Q96Q91 983 aa24.51■■□□□ 1.51
PCGF3-209ENST00000475288 CNTNAP4Q9C0A0 1308 aa24.51■■□□□ 1.51
PCGF3-209ENST00000475288 PXDNLA1KZ92 1463 aa24.51■■□□□ 1.51
PCGF3-209ENST00000475288 TRAPPC3LQ5T215 181 aa24.5■■□□□ 1.51
PCGF3-209ENST00000475288 NLGN1Q8N2Q7 840 aa24.5■■□□□ 1.51
PCGF3-209ENST00000475288 KDM6AO15550 1401 aaPredicted RBP24.5■■□□□ 1.51
PCGF3-209ENST00000475288 TGFB2P61812 414 aa24.49■■□□□ 1.51
PCGF3-209ENST00000475288 EIF4G2P78344 907 aaKnown RBP eCLIP24.49■■□□□ 1.513e-6■■■■■ 28.1
PCGF3-209ENST00000475288 PANK3Q9H999 370 aa24.49■■□□□ 1.51
PCGF3-209ENST00000475288 C10orf71Q711Q0 1435 aa24.49■■□□□ 1.51
PCGF3-209ENST00000475288 POLR3GLQ9BT43 218 aa24.48■■□□□ 1.51
PCGF3-209ENST00000475288 C4AP0C0L4 1744 aa24.47■■□□□ 1.51
PCGF3-209ENST00000475288 RPS6KA4O75676 772 aa24.46■■□□□ 1.51
PCGF3-209ENST00000475288 ZNF530Q6P9A1 599 aaPredicted RBP24.46■■□□□ 1.51
PCGF3-209ENST00000475288 CABP4P57796 275 aa24.45■■□□□ 1.5
PCGF3-209ENST00000475288 IFFO2Q5TF58 517 aa24.45■■□□□ 1.5
PCGF3-209ENST00000475288 ARHGEF1Q92888 912 aaKnown RBP24.45■■□□□ 1.5
PCGF3-209ENST00000475288 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.5
PCGF3-209ENST00000475288 HSPA5P11021 654 aaKnown RBP24.44■■□□□ 1.5
PCGF3-209ENST00000475288 GYS1P13807 737 aa24.43■■□□□ 1.5
PCGF3-209ENST00000475288 N4BP2Q86UW6 1770 aaPredicted RBP24.43■■□□□ 1.5
PCGF3-209ENST00000475288 MYH14Q7Z406 1995 aaKnown RBP24.43■■□□□ 1.5
PCGF3-209ENST00000475288 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
PCGF3-209ENST00000475288 HSPA6P17066 643 aa24.42■■□□□ 1.5
PCGF3-209ENST00000475288 MTHFSP49914 203 aa24.42■■□□□ 1.5
PCGF3-209ENST00000475288 CCDC87Q9NVE4 849 aa24.42■■□□□ 1.5
PCGF3-209ENST00000475288 WWC3Q9ULE0 1092 aa24.42■■□□□ 1.5
PCGF3-209ENST00000475288 RFC4P35249 363 aa24.41■■□□□ 1.5
PCGF3-209ENST00000475288 C1orf141Q5JVX7 400 aa24.41■■□□□ 1.5
PCGF3-209ENST00000475288 ZNF526Q8TF50 670 aaPredicted RBP24.41■■□□□ 1.5
PCGF3-209ENST00000475288 MORC1Q86VD1 984 aa24.4■■□□□ 1.5
PCGF3-209ENST00000475288 SCN11AQ9UI33 1791 aa24.39■■□□□ 1.5
PCGF3-209ENST00000475288 TJP1Q07157 1748 aa24.39■■□□□ 1.5
PCGF3-209ENST00000475288 KIF3CO14782 793 aa24.39■■□□□ 1.49
PCGF3-209ENST00000475288 AEBP1Q8IUX7 1158 aa24.39■■□□□ 1.49
PCGF3-209ENST00000475288 PARP3Q9Y6F1 533 aa24.38■■□□□ 1.49
PCGF3-209ENST00000475288 A0A0G2JLW4 131 aa24.37■■□□□ 1.49
PCGF3-209ENST00000475288 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
PCGF3-209ENST00000475288 BCS1LQ9Y276 419 aa24.37■■□□□ 1.49
PCGF3-209ENST00000475288 ARFGEF1Q9Y6D6 1849 aa24.36■■□□□ 1.49
PCGF3-209ENST00000475288 IL13P35225 146 aa24.36■■□□□ 1.49
PCGF3-209ENST00000475288 CRKLP46109 303 aaKnown RBP24.36■■□□□ 1.49
PCGF3-209ENST00000475288 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
PCGF3-209ENST00000475288 NFATC2IPQ8NCF5 419 aa24.36■■□□□ 1.49
PCGF3-209ENST00000475288 KNSTRNQ9Y448 316 aa24.35■■□□□ 1.49
PCGF3-209ENST00000475288 USP42Q9H9J4 1324 aaKnown RBP24.35■■□□□ 1.49
PCGF3-209ENST00000475288 ADAMTS7Q9UKP4 1686 aa24.34■■□□□ 1.49
PCGF3-209ENST00000475288 PTCD1O75127 700 aaKnown RBP24.34■■□□□ 1.49
PCGF3-209ENST00000475288 DPEP1P16444 411 aa24.34■■□□□ 1.49
PCGF3-209ENST00000475288 MRC1P22897 1456 aa24.33■■□□□ 1.49
PCGF3-209ENST00000475288 KCNA3P22001 575 aa24.32■■□□□ 1.48
PCGF3-209ENST00000475288 AKAP4Q5JQC9 854 aa24.32■■□□□ 1.48
PCGF3-209ENST00000475288 FCHSD2O94868 740 aa24.31■■□□□ 1.48
PCGF3-209ENST00000475288 AMER1Q5JTC6 1135 aaPredicted RBP24.3■■□□□ 1.48
PCGF3-209ENST00000475288 ARHGAP27Q6ZUM4 889 aa24.3■■□□□ 1.48
PCGF3-209ENST00000475288 FKBP8Q14318 412 aa24.29■■□□□ 1.48
PCGF3-209ENST00000475288 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
PCGF3-209ENST00000475288 SLC52A2Q9HAB3 445 aa24.29■■□□□ 1.48
PCGF3-209ENST00000475288 PIM2Q9P1W9 311 aa24.29■■□□□ 1.48
PCGF3-209ENST00000475288 TOMM70O94826 608 aa24.28■■□□□ 1.48
PCGF3-209ENST00000475288 DDR1Q08345 913 aa24.27■■□□□ 1.48
PCGF3-209ENST00000475288 SRP68Q9UHB9 627 aaKnown RBP24.27■■□□□ 1.48
PCGF3-209ENST00000475288 TM4SF1P30408 202 aa24.26■■□□□ 1.47
PCGF3-209ENST00000475288 APLP1P51693 650 aa24.25■■□□□ 1.47
PCGF3-209ENST00000475288 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
PCGF3-209ENST00000475288 VIRMAQ69YN4 1812 aaKnown RBP24.25■■□□□ 1.47
PCGF3-209ENST00000475288 SOS1Q07889 1333 aaPredicted RBP24.25■■□□□ 1.47
PCGF3-209ENST00000475288 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
PCGF3-209ENST00000475288 POLRMTO00411 1230 aaKnown RBP24.24■■□□□ 1.47
PCGF3-209ENST00000475288 RNMTO43148 476 aaKnown RBP24.23■■□□□ 1.47
PCGF3-209ENST00000475288 DNAJC10Q8IXB1 793 aa24.23■■□□□ 1.47
PCGF3-209ENST00000475288 NRXN2Q9P2S2 1712 aa24.23■■□□□ 1.47
PCGF3-209ENST00000475288 ZPR1O75312 459 aa24.22■■□□□ 1.47
PCGF3-209ENST00000475288 CYP19A1P11511 503 aaPredicted RBP24.22■■□□□ 1.47
PCGF3-209ENST00000475288 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
PCGF3-209ENST00000475288 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
PCGF3-209ENST00000475288 LGR6Q9HBX8 967 aa24.22■■□□□ 1.47
PCGF3-209ENST00000475288 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
PCGF3-209ENST00000475288 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
PCGF3-209ENST00000475288 NMRK2Q9NPI5 230 aa24.2■■□□□ 1.46
PCGF3-209ENST00000475288 NARFQ9UHQ1 456 aa24.2■■□□□ 1.46
PCGF3-209ENST00000475288 COL15A1P39059 1388 aa24.19■■□□□ 1.46
PCGF3-209ENST00000475288 USPL1Q5W0Q7 1092 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms