RNA–Protein interactions for RNA: ENST00000475279.2

CLCN2-207, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-207ENST00000475279 SIK1P57059 783 aa17.34■□□□□ 0.37
CLCN2-207ENST00000475279 HSPA1AP0DMV8 641 aaKnown RBP17.33■□□□□ 0.36
CLCN2-207ENST00000475279 HSPA1BP0DMV9 641 aaKnown RBP17.33■□□□□ 0.36
CLCN2-207ENST00000475279 C10orf71Q711Q0 1435 aa17.32■□□□□ 0.36
CLCN2-207ENST00000475279 KCNA3P22001 575 aa17.31■□□□□ 0.36
CLCN2-207ENST00000475279 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
CLCN2-207ENST00000475279 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
CLCN2-207ENST00000475279 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
CLCN2-207ENST00000475279 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
CLCN2-207ENST00000475279 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
CLCN2-207ENST00000475279 KIF13BQ9NQT8 1826 aa17.29■□□□□ 0.36
CLCN2-207ENST00000475279 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
CLCN2-207ENST00000475279 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
CLCN2-207ENST00000475279 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
CLCN2-207ENST00000475279 ITGB4P16144 1822 aa17.28■□□□□ 0.36
CLCN2-207ENST00000475279 TMF1P82094 1093 aa17.28■□□□□ 0.36
CLCN2-207ENST00000475279 SMC1BQ8NDV3 1235 aa17.28■□□□□ 0.36
CLCN2-207ENST00000475279 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
CLCN2-207ENST00000475279 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLCN2-207ENST00000475279 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
CLCN2-207ENST00000475279 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
CLCN2-207ENST00000475279 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.36
CLCN2-207ENST00000475279 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
CLCN2-207ENST00000475279 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
CLCN2-207ENST00000475279 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
CLCN2-207ENST00000475279 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
CLCN2-207ENST00000475279 DCAF5Q96JK2 942 aa17.25■□□□□ 0.35
CLCN2-207ENST00000475279 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
CLCN2-207ENST00000475279 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
CLCN2-207ENST00000475279 SLC34A2O95436 690 aa17.24■□□□□ 0.35
CLCN2-207ENST00000475279 GYS1P13807 737 aa17.24■□□□□ 0.35
CLCN2-207ENST00000475279 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
CLCN2-207ENST00000475279 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
CLCN2-207ENST00000475279 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
CLCN2-207ENST00000475279 FYB1O15117 783 aa17.23■□□□□ 0.35
CLCN2-207ENST00000475279 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
CLCN2-207ENST00000475279 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
CLCN2-207ENST00000475279 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
CLCN2-207ENST00000475279 PKD1L3Q7Z443 1732 aa17.23■□□□□ 0.35
CLCN2-207ENST00000475279 INSRP06213 1382 aa17.23■□□□□ 0.35
CLCN2-207ENST00000475279 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
CLCN2-207ENST00000475279 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
CLCN2-207ENST00000475279 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
CLCN2-207ENST00000475279 CHRNA5P30532 468 aa17.21■□□□□ 0.35
CLCN2-207ENST00000475279 RFC4P35249 363 aa17.2■□□□□ 0.34
CLCN2-207ENST00000475279 RASSF7Q02833 373 aa17.2■□□□□ 0.34
CLCN2-207ENST00000475279 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
CLCN2-207ENST00000475279 FLT4P35916 1363 aa17.19■□□□□ 0.34
CLCN2-207ENST00000475279 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
CLCN2-207ENST00000475279 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
CLCN2-207ENST00000475279 KDRP35968 1356 aa17.18■□□□□ 0.34
CLCN2-207ENST00000475279 DDR1Q08345 913 aa17.18■□□□□ 0.34
CLCN2-207ENST00000475279 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
CLCN2-207ENST00000475279 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
CLCN2-207ENST00000475279 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
CLCN2-207ENST00000475279 ADRA2BP18089 450 aa17.17■□□□□ 0.34
CLCN2-207ENST00000475279 TESK2Q96S53 571 aa17.17■□□□□ 0.34
CLCN2-207ENST00000475279 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
CLCN2-207ENST00000475279 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
CLCN2-207ENST00000475279 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
CLCN2-207ENST00000475279 PHKG2P15735 406 aa17.16■□□□□ 0.34
CLCN2-207ENST00000475279 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
CLCN2-207ENST00000475279 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
CLCN2-207ENST00000475279 FKBP8Q14318 412 aa17.15■□□□□ 0.34
CLCN2-207ENST00000475279 GLTPD2A6NH11 291 aa17.14■□□□□ 0.33
CLCN2-207ENST00000475279 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
CLCN2-207ENST00000475279 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
CLCN2-207ENST00000475279 CNTNAP4Q9C0A0 1308 aa17.14■□□□□ 0.33
CLCN2-207ENST00000475279 SBF1O95248 1867 aa17.14■□□□□ 0.33
CLCN2-207ENST00000475279 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
CLCN2-207ENST00000475279 FOXN1O15353 648 aa17.13■□□□□ 0.33
CLCN2-207ENST00000475279 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
CLCN2-207ENST00000475279 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
CLCN2-207ENST00000475279 POTECB2RU33 542 aa17.12■□□□□ 0.33
CLCN2-207ENST00000475279 EYA1Q99502 592 aa17.12■□□□□ 0.33
CLCN2-207ENST00000475279 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
CLCN2-207ENST00000475279 LMNB1P20700 586 aa17.11■□□□□ 0.33
CLCN2-207ENST00000475279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLCN2-207ENST00000475279 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
CLCN2-207ENST00000475279 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
CLCN2-207ENST00000475279 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
CLCN2-207ENST00000475279 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
CLCN2-207ENST00000475279 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
CLCN2-207ENST00000475279 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.33
CLCN2-207ENST00000475279 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
CLCN2-207ENST00000475279 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.32
CLCN2-207ENST00000475279 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
CLCN2-207ENST00000475279 TM4SF1P30408 202 aa17.07■□□□□ 0.32
CLCN2-207ENST00000475279 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
CLCN2-207ENST00000475279 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
CLCN2-207ENST00000475279 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
CLCN2-207ENST00000475279 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
CLCN2-207ENST00000475279 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
CLCN2-207ENST00000475279 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
CLCN2-207ENST00000475279 NFKBIEO00221 500 aa17.05■□□□□ 0.32
CLCN2-207ENST00000475279 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
CLCN2-207ENST00000475279 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
CLCN2-207ENST00000475279 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
CLCN2-207ENST00000475279 CABP4P57796 275 aa17.03■□□□□ 0.32
CLCN2-207ENST00000475279 USPL1Q5W0Q7 1092 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms