RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 FAM208AQ9UK61 1670 aaKnown RBP23.04■■□□□ 1.28
SEC61A2-213ENST00000475268 FLIIQ13045 1269 aa23.04■■□□□ 1.28
SEC61A2-213ENST00000475268 PRDM11Q9NQV5 511 aa23.04■■□□□ 1.28
SEC61A2-213ENST00000475268 SIRT2Q8IXJ6 389 aa23.03■■□□□ 1.28
SEC61A2-213ENST00000475268 OVOS2A0A0G2JMS6 1433 aa23.03■■□□□ 1.28
SEC61A2-213ENST00000475268 KDM3BQ7LBC6 1761 aa23.03■■□□□ 1.28
SEC61A2-213ENST00000475268 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
SEC61A2-213ENST00000475268 MEGF6O75095 1541 aa23.02■■□□□ 1.28
SEC61A2-213ENST00000475268 SPG7Q9UQ90 795 aa23.02■■□□□ 1.28
SEC61A2-213ENST00000475268 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
SEC61A2-213ENST00000475268 IPO9Q96P70 1041 aaKnown RBP23.01■■□□□ 1.27
SEC61A2-213ENST00000475268 CCT4P50991 539 aaKnown RBP23■■□□□ 1.27
SEC61A2-213ENST00000475268 NUCB1Q02818 461 aa23■■□□□ 1.27
SEC61A2-213ENST00000475268 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
SEC61A2-213ENST00000475268 GCC1Q96CN9 775 aa23■■□□□ 1.27
SEC61A2-213ENST00000475268 MEIS3Q99687 375 aa23■■□□□ 1.27
SEC61A2-213ENST00000475268 HOXB7P09629 217 aa22.99■■□□□ 1.27
SEC61A2-213ENST00000475268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.99■■□□□ 1.27
SEC61A2-213ENST00000475268 PHKG2P15735 406 aa22.98■■□□□ 1.27
SEC61A2-213ENST00000475268 CHD1LQ86WJ1 897 aa22.98■■□□□ 1.27
SEC61A2-213ENST00000475268 LNPKQ9C0E8 428 aa22.98■■□□□ 1.27
SEC61A2-213ENST00000475268 ANKRD45Q5TZF3 282 aa22.97■■□□□ 1.27
SEC61A2-213ENST00000475268 IFNL2Q8IZJ0 200 aa22.96■■□□□ 1.27
SEC61A2-213ENST00000475268 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
SEC61A2-213ENST00000475268 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
SEC61A2-213ENST00000475268 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
SEC61A2-213ENST00000475268 CACNA1FO60840 1977 aa22.95■■□□□ 1.26
SEC61A2-213ENST00000475268 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
SEC61A2-213ENST00000475268 CHPF2Q9P2E5 772 aa22.95■■□□□ 1.26
SEC61A2-213ENST00000475268 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
SEC61A2-213ENST00000475268 ADAMTS7Q9UKP4 1686 aa22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 KDM6AO15550 1401 aaPredicted RBP22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 ATP10DQ9P241 1426 aa22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 CEP85Q6P2H3 762 aa22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 RPAP2Q8IXW5 612 aaPredicted RBP22.94■■□□□ 1.26
SEC61A2-213ENST00000475268 SIPA1L3O60292 1781 aaPredicted RBP22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 CYP27B1O15528 508 aa22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 GIGYF1O75420 1035 aaPredicted RBP22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 ERICH6Q7L0X2 663 aa22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 ABCA3Q99758 1704 aa22.93■■□□□ 1.26
SEC61A2-213ENST00000475268 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
SEC61A2-213ENST00000475268 NFATC2IPQ8NCF5 419 aa22.91■■□□□ 1.26
SEC61A2-213ENST00000475268 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
SEC61A2-213ENST00000475268 NOP58Q9Y2X3 529 aaKnown RBP22.91■■□□□ 1.26
SEC61A2-213ENST00000475268 SEC24BO95487 1268 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 DCAF5Q96JK2 942 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 DCTPP1Q9H773 170 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 SCN11AQ9UI33 1791 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 HEG1Q9ULI3 1381 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 ANXA1P04083 346 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 SLC39A6Q13433 755 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 STRN4Q9NRL3 753 aa22.9■■□□□ 1.26
SEC61A2-213ENST00000475268 PRAMEF22A3QJZ6 481 aa22.89■■□□□ 1.26
SEC61A2-213ENST00000475268 ZNF790Q6PG37 636 aa22.89■■□□□ 1.26
SEC61A2-213ENST00000475268 PKD1L3Q7Z443 1732 aa22.89■■□□□ 1.25
SEC61A2-213ENST00000475268 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.25
SEC61A2-213ENST00000475268 GNAI2P04899 355 aa22.88■■□□□ 1.25
SEC61A2-213ENST00000475268 EVA1CP58658 441 aa22.88■■□□□ 1.25
SEC61A2-213ENST00000475268 HSP90AB1P08238 724 aaKnown RBP22.87■■□□□ 1.25
SEC61A2-213ENST00000475268 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
SEC61A2-213ENST00000475268 GNAI3P08754 354 aa22.87■■□□□ 1.25
SEC61A2-213ENST00000475268 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
SEC61A2-213ENST00000475268 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
SEC61A2-213ENST00000475268 PI4KAP2A4QPH2 592 aa22.85■■□□□ 1.25
SEC61A2-213ENST00000475268 PI4KAP1Q8N8J0 262 aa22.85■■□□□ 1.25
SEC61A2-213ENST00000475268 ZCRB1Q8TBF4 217 aaKnown RBP22.85■■□□□ 1.25
SEC61A2-213ENST00000475268 HMMRO75330 724 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 BCL11AQ9H165 835 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 CABP4P57796 275 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 SRCIN1Q9C0H9 1055 aa22.84■■□□□ 1.25
SEC61A2-213ENST00000475268 PARP4Q9UKK3 1724 aaKnown RBP22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 ROBO1Q9Y6N7 1651 aa22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 DNAAF4Q8WXU2 420 aa22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 USP44Q9H0E7 712 aa22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
SEC61A2-213ENST00000475268 IL2RBP14784 551 aa22.83■■□□□ 1.24
SEC61A2-213ENST00000475268 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.24
SEC61A2-213ENST00000475268 N4BP2Q86UW6 1770 aaPredicted RBP22.82■■□□□ 1.24
SEC61A2-213ENST00000475268 MRC1P22897 1456 aa22.82■■□□□ 1.24
SEC61A2-213ENST00000475268 APBB1O00213 710 aa22.82■■□□□ 1.24
SEC61A2-213ENST00000475268 UBTFL1P0CB47 393 aaPredicted RBP22.81■■□□□ 1.24
SEC61A2-213ENST00000475268 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
SEC61A2-213ENST00000475268 LRRFIP2Q9Y608 721 aaKnown RBP22.81■■□□□ 1.24
SEC61A2-213ENST00000475268 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 HYPKQ9NX55 129 aa22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 ADCY9O60503 1353 aa22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 BEND3Q5T5X7 828 aa22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 BTG4Q9NY30 223 aa22.8■■□□□ 1.24
SEC61A2-213ENST00000475268 BMP2KLQ5H9B9 411 aa22.79■■□□□ 1.24
SEC61A2-213ENST00000475268 DDX54Q8TDD1 881 aaKnown RBP22.79■■□□□ 1.24
SEC61A2-213ENST00000475268 ANP32EQ9BTT0 268 aa22.79■■□□□ 1.24
SEC61A2-213ENST00000475268 DDX21Q9NR30 783 aaKnown RBP eCLIP22.79■■□□□ 1.24
SEC61A2-213ENST00000475268 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms