RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
COL2A1-205ENST00000474996 GNPATO15228 680 aa19.73■□□□□ 0.75
COL2A1-205ENST00000474996 GIGYF1O75420 1035 aaPredicted RBP19.72■□□□□ 0.75
COL2A1-205ENST00000474996 KDRP35968 1356 aa19.7■□□□□ 0.74
COL2A1-205ENST00000474996 ERVV-2B6SEH9 535 aa19.69■□□□□ 0.74
COL2A1-205ENST00000474996 PLEKHO1Q53GL0 409 aaPredicted RBP19.69■□□□□ 0.74
COL2A1-205ENST00000474996 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
COL2A1-205ENST00000474996 HSP90AB1P08238 724 aaKnown RBP19.68■□□□□ 0.74
COL2A1-205ENST00000474996 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
COL2A1-205ENST00000474996 MORC1Q86VD1 984 aa19.68■□□□□ 0.74
COL2A1-205ENST00000474996 SLC4A9Q96Q91 983 aa19.68■□□□□ 0.74
COL2A1-205ENST00000474996 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
COL2A1-205ENST00000474996 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
COL2A1-205ENST00000474996 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
COL2A1-205ENST00000474996 AEBP1Q8IUX7 1158 aa19.67■□□□□ 0.74
COL2A1-205ENST00000474996 CCER1Q8TC90 406 aaPredicted RBP19.67■□□□□ 0.74
COL2A1-205ENST00000474996 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
COL2A1-205ENST00000474996 COL5A3P25940 1745 aaPredicted RBP19.66■□□□□ 0.74
COL2A1-205ENST00000474996 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
COL2A1-205ENST00000474996 ATP10DQ9P241 1426 aa19.66■□□□□ 0.74
COL2A1-205ENST00000474996 MMP10P09238 476 aa19.65■□□□□ 0.74
COL2A1-205ENST00000474996 CABP4P57796 275 aa19.65■□□□□ 0.74
COL2A1-205ENST00000474996 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
COL2A1-205ENST00000474996 TRAPPC3LQ5T215 181 aa19.64■□□□□ 0.73
COL2A1-205ENST00000474996 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
COL2A1-205ENST00000474996 MTHFSP49914 203 aa19.63■□□□□ 0.73
COL2A1-205ENST00000474996 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
COL2A1-205ENST00000474996 SULT6B1Q6IMI4 303 aa19.63■□□□□ 0.73
COL2A1-205ENST00000474996 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
COL2A1-205ENST00000474996 MYH14Q7Z406 1995 aaKnown RBP19.62■□□□□ 0.73
COL2A1-205ENST00000474996 KIF13BQ9NQT8 1826 aa19.62■□□□□ 0.73
COL2A1-205ENST00000474996 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
COL2A1-205ENST00000474996 ADCY9O60503 1353 aa19.61■□□□□ 0.73
COL2A1-205ENST00000474996 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
COL2A1-205ENST00000474996 ARHGEF1Q92888 912 aaKnown RBP19.61■□□□□ 0.73
COL2A1-205ENST00000474996 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
COL2A1-205ENST00000474996 KIAA1551Q9HCM1 1747 aa19.6■□□□□ 0.73
COL2A1-205ENST00000474996 PTCD1O75127 700 aaKnown RBP19.6■□□□□ 0.73
COL2A1-205ENST00000474996 RPS6KA4O75676 772 aa19.6■□□□□ 0.73
COL2A1-205ENST00000474996 IL13P35225 146 aa19.6■□□□□ 0.73
COL2A1-205ENST00000474996 NLGN1Q8N2Q7 840 aa19.6■□□□□ 0.73
COL2A1-205ENST00000474996 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
COL2A1-205ENST00000474996 ADRA2BP18089 450 aa19.59■□□□□ 0.73
COL2A1-205ENST00000474996 RFC4P35249 363 aa19.59■□□□□ 0.73
COL2A1-205ENST00000474996 NFATC2IPQ8NCF5 419 aa19.59■□□□□ 0.73
COL2A1-205ENST00000474996 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
COL2A1-205ENST00000474996 GPBP1L1Q9HC44 474 aaPredicted RBP19.59■□□□□ 0.73
COL2A1-205ENST00000474996 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
COL2A1-205ENST00000474996 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
COL2A1-205ENST00000474996 GYS1P13807 737 aa19.58■□□□□ 0.72
COL2A1-205ENST00000474996 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.72
COL2A1-205ENST00000474996 C10orf71Q711Q0 1435 aa19.57■□□□□ 0.72
COL2A1-205ENST00000474996 TJP1Q07157 1748 aa19.56■□□□□ 0.72
COL2A1-205ENST00000474996 KIF7Q2M1P5 1343 aa19.56■□□□□ 0.72
COL2A1-205ENST00000474996 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
COL2A1-205ENST00000474996 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
COL2A1-205ENST00000474996 TGFB2P61812 414 aa19.55■□□□□ 0.72
COL2A1-205ENST00000474996 CCDC87Q9NVE4 849 aa19.55■□□□□ 0.72
COL2A1-205ENST00000474996 VIRMAQ69YN4 1812 aaKnown RBP19.54■□□□□ 0.72
COL2A1-205ENST00000474996 PARP3Q9Y6F1 533 aa19.54■□□□□ 0.72
COL2A1-205ENST00000474996 AKAP4Q5JQC9 854 aa19.53■□□□□ 0.72
COL2A1-205ENST00000474996 BCS1LQ9Y276 419 aa19.53■□□□□ 0.72
COL2A1-205ENST00000474996 HMOX1P09601 288 aa19.52■□□□□ 0.72
COL2A1-205ENST00000474996 DPEP1P16444 411 aa19.52■□□□□ 0.72
COL2A1-205ENST00000474996 SRP68Q9UHB9 627 aaKnown RBP19.52■□□□□ 0.72
COL2A1-205ENST00000474996 CEP350Q5VT06 3117 aa19.52■□□□□ 0.72
COL2A1-205ENST00000474996 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.71
COL2A1-205ENST00000474996 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
COL2A1-205ENST00000474996 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
COL2A1-205ENST00000474996 USP42Q9H9J4 1324 aaKnown RBP19.51■□□□□ 0.71
COL2A1-205ENST00000474996 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
COL2A1-205ENST00000474996 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
COL2A1-205ENST00000474996 FKBP8Q14318 412 aa19.49■□□□□ 0.71
COL2A1-205ENST00000474996 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
COL2A1-205ENST00000474996 DNAJC10Q8IXB1 793 aa19.49■□□□□ 0.71
COL2A1-205ENST00000474996 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
COL2A1-205ENST00000474996 MRC1P22897 1456 aa19.48■□□□□ 0.71
COL2A1-205ENST00000474996 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
COL2A1-205ENST00000474996 FCHSD2O94868 740 aa19.48■□□□□ 0.71
COL2A1-205ENST00000474996 ARHGAP27Q6ZUM4 889 aa19.48■□□□□ 0.71
COL2A1-205ENST00000474996 DDR1Q08345 913 aa19.47■□□□□ 0.71
COL2A1-205ENST00000474996 SLC39A6Q13433 755 aa19.47■□□□□ 0.71
COL2A1-205ENST00000474996 KIF3CO14782 793 aa19.46■□□□□ 0.71
COL2A1-205ENST00000474996 DIAPH1O60610 1272 aaKnown RBP19.46■□□□□ 0.71
COL2A1-205ENST00000474996 KCNA3P22001 575 aa19.46■□□□□ 0.71
COL2A1-205ENST00000474996 MTHFSDQ2M296 383 aaKnown RBP19.46■□□□□ 0.71
COL2A1-205ENST00000474996 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
COL2A1-205ENST00000474996 KCPQ6ZWJ8 1503 aa19.45■□□□□ 0.7
COL2A1-205ENST00000474996 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
COL2A1-205ENST00000474996 HSPA6P17066 643 aa19.44■□□□□ 0.7
COL2A1-205ENST00000474996 USPL1Q5W0Q7 1092 aa19.44■□□□□ 0.7
COL2A1-205ENST00000474996 SOS1Q07889 1333 aaPredicted RBP19.44■□□□□ 0.7
COL2A1-205ENST00000474996 POLRMTO00411 1230 aaKnown RBP19.43■□□□□ 0.7
COL2A1-205ENST00000474996 ZPR1O75312 459 aa19.43■□□□□ 0.7
COL2A1-205ENST00000474996 CNGB1Q14028 1251 aaPredicted RBP19.43■□□□□ 0.7
COL2A1-205ENST00000474996 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
COL2A1-205ENST00000474996 TM4SF1P30408 202 aa19.42■□□□□ 0.7
COL2A1-205ENST00000474996 CHRNA5P30532 468 aa19.41■□□□□ 0.7
COL2A1-205ENST00000474996 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
COL2A1-205ENST00000474996 UBR2Q8IWV8 1755 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms