RNA–Protein interactions for RNA: ENST00000474937.1

NIN-209, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-209ENST00000474937 SSFA2P28290 1259 aa17■□□□□ 0.31
NIN-209ENST00000474937 ATP6V1AP38606 617 aa17■□□□□ 0.31
NIN-209ENST00000474937 MTHFSP49914 203 aa17■□□□□ 0.31
NIN-209ENST00000474937 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
NIN-209ENST00000474937 MSL1Q68DK7 614 aa17■□□□□ 0.31
NIN-209ENST00000474937 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
NIN-209ENST00000474937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
NIN-209ENST00000474937 ITPK1Q13572 414 aa16.99■□□□□ 0.31
NIN-209ENST00000474937 CABP4P57796 275 aa16.98■□□□□ 0.31
NIN-209ENST00000474937 GPR162Q16538 588 aa16.98■□□□□ 0.31
NIN-209ENST00000474937 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
NIN-209ENST00000474937 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
NIN-209ENST00000474937 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
NIN-209ENST00000474937 PHF14O94880 888 aa16.97■□□□□ 0.31
NIN-209ENST00000474937 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
NIN-209ENST00000474937 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
NIN-209ENST00000474937 GNPATO15228 680 aa16.96■□□□□ 0.31
NIN-209ENST00000474937 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
NIN-209ENST00000474937 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
NIN-209ENST00000474937 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
NIN-209ENST00000474937 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
NIN-209ENST00000474937 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
NIN-209ENST00000474937 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
NIN-209ENST00000474937 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
NIN-209ENST00000474937 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
NIN-209ENST00000474937 SLC4A9Q96Q91 983 aa16.94■□□□□ 0.3
NIN-209ENST00000474937 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
NIN-209ENST00000474937 RTCBQ9Y3I0 505 aaKnown RBP16.93■□□□□ 0.3
NIN-209ENST00000474937 CHD4Q14839 1912 aa16.92■□□□□ 0.3
NIN-209ENST00000474937 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
NIN-209ENST00000474937 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
NIN-209ENST00000474937 HMOX1P09601 288 aa16.91■□□□□ 0.3
NIN-209ENST00000474937 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
NIN-209ENST00000474937 ZNF784Q8NCA9 323 aaPredicted RBP16.91■□□□□ 0.3
NIN-209ENST00000474937 CNTNAP4Q9C0A0 1308 aa16.91■□□□□ 0.3
NIN-209ENST00000474937 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
NIN-209ENST00000474937 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
NIN-209ENST00000474937 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
NIN-209ENST00000474937 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
NIN-209ENST00000474937 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
NIN-209ENST00000474937 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
NIN-209ENST00000474937 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
NIN-209ENST00000474937 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
NIN-209ENST00000474937 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
NIN-209ENST00000474937 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
NIN-209ENST00000474937 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
NIN-209ENST00000474937 MMP10P09238 476 aa16.86■□□□□ 0.29
NIN-209ENST00000474937 RFC4P35249 363 aa16.86■□□□□ 0.29
NIN-209ENST00000474937 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
NIN-209ENST00000474937 COL5A3P25940 1745 aaPredicted RBP16.86■□□□□ 0.29
NIN-209ENST00000474937 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
NIN-209ENST00000474937 MRC1P22897 1456 aa16.85■□□□□ 0.29
NIN-209ENST00000474937 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
NIN-209ENST00000474937 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
NIN-209ENST00000474937 GYS1P13807 737 aa16.83■□□□□ 0.28
NIN-209ENST00000474937 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
NIN-209ENST00000474937 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.28
NIN-209ENST00000474937 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
NIN-209ENST00000474937 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
NIN-209ENST00000474937 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
NIN-209ENST00000474937 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
NIN-209ENST00000474937 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
NIN-209ENST00000474937 DNAJC10Q8IXB1 793 aa16.8■□□□□ 0.28
NIN-209ENST00000474937 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
NIN-209ENST00000474937 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
NIN-209ENST00000474937 TJP1Q07157 1748 aa16.79■□□□□ 0.28
NIN-209ENST00000474937 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
NIN-209ENST00000474937 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
NIN-209ENST00000474937 TGFB2P61812 414 aa16.79■□□□□ 0.28
NIN-209ENST00000474937 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
NIN-209ENST00000474937 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
NIN-209ENST00000474937 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
NIN-209ENST00000474937 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
NIN-209ENST00000474937 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.28
NIN-209ENST00000474937 TEFQ10587 303 aa16.77■□□□□ 0.28
NIN-209ENST00000474937 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
NIN-209ENST00000474937 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
NIN-209ENST00000474937 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
NIN-209ENST00000474937 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
NIN-209ENST00000474937 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
NIN-209ENST00000474937 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 VIRMAQ69YN4 1812 aaKnown RBP16.76■□□□□ 0.27
NIN-209ENST00000474937 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 ZPR1O75312 459 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 FKBP8Q14318 412 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
NIN-209ENST00000474937 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
NIN-209ENST00000474937 A0A0G2JLW4 131 aa16.74■□□□□ 0.27
NIN-209ENST00000474937 FCHSD2O94868 740 aa16.74■□□□□ 0.27
NIN-209ENST00000474937 STARD3NLO95772 234 aa16.74■□□□□ 0.27
NIN-209ENST00000474937 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
NIN-209ENST00000474937 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
NIN-209ENST00000474937 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
NIN-209ENST00000474937 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
NIN-209ENST00000474937 TM4SF1P30408 202 aa16.73■□□□□ 0.27
NIN-209ENST00000474937 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
NIN-209ENST00000474937 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms