RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 ZNF831Q5JPB2 1677 aa21.92■■□□□ 1.1
ITGB5-205ENST00000474838 LINC00116Q8NCU8 138 aa21.92■■□□□ 1.1
ITGB5-205ENST00000474838 ATP6V1AP38606 617 aa21.91■■□□□ 1.1
ITGB5-205ENST00000474838 ITPK1Q13572 414 aa21.91■■□□□ 1.1
ITGB5-205ENST00000474838 SSFA2P28290 1259 aa21.9■■□□□ 1.1
ITGB5-205ENST00000474838 CABP4P57796 275 aa21.9■■□□□ 1.1
ITGB5-205ENST00000474838 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
ITGB5-205ENST00000474838 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
ITGB5-205ENST00000474838 KLHL34Q8N239 644 aa21.9■■□□□ 1.1
ITGB5-205ENST00000474838 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
ITGB5-205ENST00000474838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
ITGB5-205ENST00000474838 DIAPH1O60610 1272 aaKnown RBP21.88■■□□□ 1.09
ITGB5-205ENST00000474838 PHF14O94880 888 aa21.88■■□□□ 1.09
ITGB5-205ENST00000474838 GNPATO15228 680 aa21.87■■□□□ 1.09
ITGB5-205ENST00000474838 SCN11AQ9UI33 1791 aa21.87■■□□□ 1.09
ITGB5-205ENST00000474838 HMOX1P09601 288 aa21.86■■□□□ 1.09
ITGB5-205ENST00000474838 AKAP4Q5JQC9 854 aa21.86■■□□□ 1.09
ITGB5-205ENST00000474838 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
ITGB5-205ENST00000474838 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
ITGB5-205ENST00000474838 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
ITGB5-205ENST00000474838 MRC1P22897 1456 aa21.84■■□□□ 1.09
ITGB5-205ENST00000474838 NLGN2Q8NFZ4 835 aa21.84■■□□□ 1.09
ITGB5-205ENST00000474838 CICQ96RK0 1608 aaPredicted RBP21.84■■□□□ 1.09
ITGB5-205ENST00000474838 CNGB1Q14028 1251 aaPredicted RBP21.83■■□□□ 1.09
ITGB5-205ENST00000474838 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
ITGB5-205ENST00000474838 NFATC2IPQ8NCF5 419 aa21.82■■□□□ 1.08
ITGB5-205ENST00000474838 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
ITGB5-205ENST00000474838 CNTNAP4Q9C0A0 1308 aa21.81■■□□□ 1.08
ITGB5-205ENST00000474838 GPR162Q16538 588 aa21.81■■□□□ 1.08
ITGB5-205ENST00000474838 RC3H1Q5TC82 1133 aaKnown RBP21.8■■□□□ 1.08
ITGB5-205ENST00000474838 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
ITGB5-205ENST00000474838 CD2APQ9Y5K6 639 aa21.8■■□□□ 1.08
ITGB5-205ENST00000474838 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
ITGB5-205ENST00000474838 SLC52A2Q9HAB3 445 aa21.79■■□□□ 1.08
ITGB5-205ENST00000474838 TJP1Q07157 1748 aa21.78■■□□□ 1.08
ITGB5-205ENST00000474838 ADRA2BP18089 450 aa21.78■■□□□ 1.08
ITGB5-205ENST00000474838 MTHFSDQ2M296 383 aaKnown RBP21.78■■□□□ 1.08
ITGB5-205ENST00000474838 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
ITGB5-205ENST00000474838 RNMTO43148 476 aaKnown RBP21.77■■□□□ 1.08
ITGB5-205ENST00000474838 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
ITGB5-205ENST00000474838 CHD4Q14839 1912 aa21.76■■□□□ 1.07
ITGB5-205ENST00000474838 TRAPPC3LQ5T215 181 aa21.76■■□□□ 1.07
ITGB5-205ENST00000474838 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
ITGB5-205ENST00000474838 LGR6Q9HBX8 967 aa21.76■■□□□ 1.07
ITGB5-205ENST00000474838 RPS6KA4O75676 772 aa21.75■■□□□ 1.07
ITGB5-205ENST00000474838 VIRMAQ69YN4 1812 aaKnown RBP21.75■■□□□ 1.07
ITGB5-205ENST00000474838 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
ITGB5-205ENST00000474838 CRKLP46109 303 aaKnown RBP21.73■■□□□ 1.07
ITGB5-205ENST00000474838 MYH14Q7Z406 1995 aaKnown RBP21.73■■□□□ 1.07
ITGB5-205ENST00000474838 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
ITGB5-205ENST00000474838 UTRNP46939 3433 aa21.73■■□□□ 1.07
ITGB5-205ENST00000474838 YBX3P16989 372 aaKnown RBP eCLIP21.72■■□□□ 1.07
ITGB5-205ENST00000474838 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
ITGB5-205ENST00000474838 ARHGEF1Q92888 912 aaKnown RBP21.72■■□□□ 1.07
ITGB5-205ENST00000474838 MMP10P09238 476 aa21.71■■□□□ 1.07
ITGB5-205ENST00000474838 PPP2R1AP30153 589 aa21.71■■□□□ 1.07
ITGB5-205ENST00000474838 RFC4P35249 363 aa21.71■■□□□ 1.07
ITGB5-205ENST00000474838 NLGN1Q8N2Q7 840 aa21.71■■□□□ 1.07
ITGB5-205ENST00000474838 GRIN3BO60391 1043 aa21.7■■□□□ 1.06
ITGB5-205ENST00000474838 ZNF784Q8NCA9 323 aaPredicted RBP21.7■■□□□ 1.06
ITGB5-205ENST00000474838 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
ITGB5-205ENST00000474838 GYS1P13807 737 aa21.69■■□□□ 1.06
ITGB5-205ENST00000474838 SLC39A6Q13433 755 aa21.69■■□□□ 1.06
ITGB5-205ENST00000474838 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
ITGB5-205ENST00000474838 GNAT3A8MTJ3 354 aa21.68■■□□□ 1.06
ITGB5-205ENST00000474838 DNAJC10Q8IXB1 793 aa21.68■■□□□ 1.06
ITGB5-205ENST00000474838 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
ITGB5-205ENST00000474838 C10orf71Q711Q0 1435 aa21.67■■□□□ 1.06
ITGB5-205ENST00000474838 PRKAR2BP31323 418 aa21.67■■□□□ 1.06
ITGB5-205ENST00000474838 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
ITGB5-205ENST00000474838 KIF13BQ9NQT8 1826 aa21.66■■□□□ 1.06
ITGB5-205ENST00000474838 USP42Q9H9J4 1324 aaKnown RBP21.66■■□□□ 1.06
ITGB5-205ENST00000474838 INTS5Q6P9B9 1019 aaKnown RBP21.66■■□□□ 1.06
ITGB5-205ENST00000474838 TEFQ10587 303 aa21.65■■□□□ 1.06
ITGB5-205ENST00000474838 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
ITGB5-205ENST00000474838 SIPA1L3O60292 1781 aaPredicted RBP21.65■■□□□ 1.06
ITGB5-205ENST00000474838 GOLGB1Q14789 3259 aaKnown RBP21.65■■□□□ 1.06
ITGB5-205ENST00000474838 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
ITGB5-205ENST00000474838 CYP19A1P11511 503 aaPredicted RBP21.64■■□□□ 1.05
ITGB5-205ENST00000474838 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.05
ITGB5-205ENST00000474838 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
ITGB5-205ENST00000474838 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
ITGB5-205ENST00000474838 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.05
ITGB5-205ENST00000474838 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
ITGB5-205ENST00000474838 U2AF1L5P0DN76 240 aaPredicted RBP21.63■■□□□ 1.05
ITGB5-205ENST00000474838 U2AF1Q01081 240 aaKnown RBP eCLIP21.63■■□□□ 1.05
ITGB5-205ENST00000474838 SRP68Q9UHB9 627 aaKnown RBP21.63■■□□□ 1.05
ITGB5-205ENST00000474838 KIAA1551Q9HCM1 1747 aa21.63■■□□□ 1.05
ITGB5-205ENST00000474838 PARP3Q9Y6F1 533 aa21.62■■□□□ 1.05
ITGB5-205ENST00000474838 FCHSD2O94868 740 aa21.61■■□□□ 1.05
ITGB5-205ENST00000474838 COL15A1P39059 1388 aa21.61■■□□□ 1.05
ITGB5-205ENST00000474838 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
ITGB5-205ENST00000474838 TGFB2P61812 414 aa21.59■■□□□ 1.05
ITGB5-205ENST00000474838 FKBP8Q14318 412 aa21.59■■□□□ 1.05
ITGB5-205ENST00000474838 ZBTB1Q9Y2K1 713 aa21.59■■□□□ 1.05
ITGB5-205ENST00000474838 HEG1Q9ULI3 1381 aa21.59■■□□□ 1.05
ITGB5-205ENST00000474838 ZPR1O75312 459 aa21.58■■□□□ 1.05
ITGB5-205ENST00000474838 ZNF496Q96IT1 587 aaPredicted RBP21.58■■□□□ 1.05
ITGB5-205ENST00000474838 WWC3Q9ULE0 1092 aa21.58■■□□□ 1.05
ITGB5-205ENST00000474838 STARD3NLO95772 234 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms