RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 C20orf194Q5TEA3 1177 aa26.08■■□□□ 1.77
EDEM3-206ENST00000474725 FRAT1Q92837 279 aaPredicted RBP26.08■■□□□ 1.77
EDEM3-206ENST00000474725 SLC52A2Q9HAB3 445 aa26.08■■□□□ 1.77
EDEM3-206ENST00000474725 SIPA1L3O60292 1781 aaPredicted RBP26.08■■□□□ 1.76
EDEM3-206ENST00000474725 NKX1-1Q15270 411 aaPredicted RBP26.08■■□□□ 1.76
EDEM3-206ENST00000474725 VPS72Q15906 364 aa26.08■■□□□ 1.76
EDEM3-206ENST00000474725 USP21Q9UK80 565 aa26.08■■□□□ 1.76
EDEM3-206ENST00000474725 KCNQ3O43525 872 aa26.07■■□□□ 1.76
EDEM3-206ENST00000474725 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
EDEM3-206ENST00000474725 ERICH6BQ5W0A0 696 aa26.06■■□□□ 1.76
EDEM3-206ENST00000474725 NFATC2IPQ8NCF5 419 aa26.06■■□□□ 1.76
EDEM3-206ENST00000474725 CDCA7Q9BWT1 371 aaPredicted RBP26.06■■□□□ 1.76
EDEM3-206ENST00000474725 EXOC5O00471 708 aa26.06■■□□□ 1.76
EDEM3-206ENST00000474725 TCERG1O14776 1098 aaKnown RBP26.05■■□□□ 1.76
EDEM3-206ENST00000474725 CANXP27824 592 aaKnown RBP26.05■■□□□ 1.76
EDEM3-206ENST00000474725 BARGINQ6ZT62 677 aa26.04■■□□□ 1.76
EDEM3-206ENST00000474725 MRC1P22897 1456 aa26.04■■□□□ 1.76
EDEM3-206ENST00000474725 CABP4P57796 275 aa26.04■■□□□ 1.76
EDEM3-206ENST00000474725 EIF4A1P60842 406 aaKnown RBP26.04■■□□□ 1.76
EDEM3-206ENST00000474725 MRPL50Q8N5N7 158 aaKnown RBP26.03■■□□□ 1.76
EDEM3-206ENST00000474725 EXOC6Q8TAG9 804 aa26.02■■□□□ 1.76
EDEM3-206ENST00000474725 AFF2P51816 1311 aa26.01■■□□□ 1.75
EDEM3-206ENST00000474725 BRPF1P55201 1214 aaPredicted RBP26.01■■□□□ 1.75
EDEM3-206ENST00000474725 CRBNQ96SW2 442 aa26.01■■□□□ 1.75
EDEM3-206ENST00000474725 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.01■■□□□ 1.75
EDEM3-206ENST00000474725 NOB1Q9ULX3 412 aaKnown RBP26.01■■□□□ 1.75
EDEM3-206ENST00000474725 TNS2Q63HR2 1409 aa26■■□□□ 1.75
EDEM3-206ENST00000474725 ERVV-2B6SEH9 535 aa26■■□□□ 1.75
EDEM3-206ENST00000474725 SLC39A6Q13433 755 aa26■■□□□ 1.75
EDEM3-206ENST00000474725 TNNQ9UQP3 1299 aa26■■□□□ 1.75
EDEM3-206ENST00000474725 DDB1Q16531 1140 aa25.99■■□□□ 1.75
EDEM3-206ENST00000474725 ZKSCAN2Q63HK3 967 aa25.99■■□□□ 1.75
EDEM3-206ENST00000474725 PDE3AQ14432 1141 aa25.98■■□□□ 1.75
EDEM3-206ENST00000474725 FAM98CQ17RN3 349 aaKnown RBP25.98■■□□□ 1.75
EDEM3-206ENST00000474725 KIF16BQ96L93 1317 aa25.98■■□□□ 1.75
EDEM3-206ENST00000474725 ZNF790Q6PG37 636 aa25.98■■□□□ 1.75
EDEM3-206ENST00000474725 SOS1Q07889 1333 aaPredicted RBP25.97■■□□□ 1.75
EDEM3-206ENST00000474725 PANK1Q8TE04 598 aa25.96■■□□□ 1.75
EDEM3-206ENST00000474725 TOGARAM1Q9Y4F4 1720 aa25.96■■□□□ 1.75
EDEM3-206ENST00000474725 IPO8O15397 1037 aaKnown RBP25.94■■□□□ 1.74
EDEM3-206ENST00000474725 ATF7IPQ6VMQ6 1270 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 CLUAP1Q96AJ1 413 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 PPP4R2Q9NY27 417 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 HEG1Q9ULI3 1381 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 TRIM27P14373 513 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
EDEM3-206ENST00000474725 RLBP1P12271 317 aa25.93■■□□□ 1.74
EDEM3-206ENST00000474725 CCDC30Q5VVM6 783 aa25.93■■□□□ 1.74
EDEM3-206ENST00000474725 HOXB7P09629 217 aa25.92■■□□□ 1.74
EDEM3-206ENST00000474725 GIGYF1O75420 1035 aaPredicted RBP25.92■■□□□ 1.74
EDEM3-206ENST00000474725 SLC4A2P04920 1241 aa25.92■■□□□ 1.74
EDEM3-206ENST00000474725 TTC5Q8N0Z6 440 aa25.92■■□□□ 1.74
EDEM3-206ENST00000474725 MARCH10Q8NA82 808 aaPredicted RBP25.92■■□□□ 1.74
EDEM3-206ENST00000474725 HDGFL1Q5TGJ6 251 aa25.91■■□□□ 1.74
EDEM3-206ENST00000474725 DZIP1LQ8IYY4 767 aaKnown RBP25.91■■□□□ 1.74
EDEM3-206ENST00000474725 GJD4Q96KN9 370 aaPredicted RBP25.91■■□□□ 1.74
EDEM3-206ENST00000474725 ATRNO75882 1429 aa25.91■■□□□ 1.74
EDEM3-206ENST00000474725 EIF2S2P20042 333 aaKnown RBP25.9■■□□□ 1.74
EDEM3-206ENST00000474725 ARHGAP45Q92619 1136 aa25.9■■□□□ 1.74
EDEM3-206ENST00000474725 TMOD3Q9NYL9 352 aa25.9■■□□□ 1.74
EDEM3-206ENST00000474725 TRPC5Q9UL62 973 aaPredicted RBP25.9■■□□□ 1.74
EDEM3-206ENST00000474725 COG6Q9Y2V7 657 aa25.9■■□□□ 1.74
EDEM3-206ENST00000474725 ZNF496Q96IT1 587 aaPredicted RBP25.9■■□□□ 1.74
EDEM3-206ENST00000474725 STK31Q9BXU1 1019 aa25.9■■□□□ 1.74
EDEM3-206ENST00000474725 GLI3P10071 1580 aa25.89■■□□□ 1.74
EDEM3-206ENST00000474725 PRAMEF22A3QJZ6 481 aa25.89■■□□□ 1.74
EDEM3-206ENST00000474725 MS4A1P11836 297 aa25.89■■□□□ 1.74
EDEM3-206ENST00000474725 FTSJ3Q8IY81 847 aaKnown RBP25.89■■□□□ 1.74
EDEM3-206ENST00000474725 A0A0G2JS52 829 aa25.87■■□□□ 1.73
EDEM3-206ENST00000474725 MYT1Q01538 1121 aa25.87■■□□□ 1.73
EDEM3-206ENST00000474725 PIGBQ92521 554 aa25.87■■□□□ 1.73
EDEM3-206ENST00000474725 FMNL2Q96PY5 1086 aa25.87■■□□□ 1.73
EDEM3-206ENST00000474725 G2E3Q7L622 706 aa25.86■■□□□ 1.73
EDEM3-206ENST00000474725 FBXO41Q8TF61 875 aa25.86■■□□□ 1.73
EDEM3-206ENST00000474725 QTRT2Q9H974 415 aaKnown RBP25.86■■□□□ 1.73
EDEM3-206ENST00000474725 ITGB4P16144 1822 aa25.86■■□□□ 1.73
EDEM3-206ENST00000474725 CHMP4AQ9BY43 222 aa25.85■■□□□ 1.73
EDEM3-206ENST00000474725 PAPPAQ13219 1627 aa25.85■■□□□ 1.73
EDEM3-206ENST00000474725 B4GALNT3Q6L9W6 998 aa25.84■■□□□ 1.73
EDEM3-206ENST00000474725 API5Q9BZZ5 524 aaKnown RBP25.84■■□□□ 1.73
EDEM3-206ENST00000474725 THSD7AQ9UPZ6 1657 aa25.84■■□□□ 1.73
EDEM3-206ENST00000474725 PRIM1P49642 420 aaKnown RBP25.84■■□□□ 1.73
EDEM3-206ENST00000474725 SNRPA1P09661 255 aaKnown RBP25.83■■□□□ 1.73
EDEM3-206ENST00000474725 TMEM57Q8N5G2 664 aa25.83■■□□□ 1.73
EDEM3-206ENST00000474725 SYTL4Q96C24 671 aaPredicted RBP25.83■■□□□ 1.73
EDEM3-206ENST00000474725 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.73
EDEM3-206ENST00000474725 PTPRCP08575 1304 aa25.83■■□□□ 1.72
EDEM3-206ENST00000474725 MVPQ14764 893 aaKnown RBP25.82■■□□□ 1.72
EDEM3-206ENST00000474725 CHPF2Q9P2E5 772 aa25.82■■□□□ 1.72
EDEM3-206ENST00000474725 C5P01031 1676 aa25.82■■□□□ 1.72
EDEM3-206ENST00000474725 BCL9O00512 1426 aa25.82■■□□□ 1.72
EDEM3-206ENST00000474725 ASAP1Q9ULH1 1129 aa25.82■■□□□ 1.72
EDEM3-206ENST00000474725 KCPQ6ZWJ8 1503 aa25.82■■□□□ 1.72
EDEM3-206ENST00000474725 ACSBG1Q96GR2 724 aa25.81■■□□□ 1.72
EDEM3-206ENST00000474725 UBR2Q8IWV8 1755 aa25.81■■□□□ 1.72
EDEM3-206ENST00000474725 ONECUT3O60422 494 aaPredicted RBP25.8■■□□□ 1.72
EDEM3-206ENST00000474725 ATG3Q9NT62 314 aa25.8■■□□□ 1.72
EDEM3-206ENST00000474725 ABCC4O15439 1325 aa25.8■■□□□ 1.72
EDEM3-206ENST00000474725 PTCD1O75127 700 aaKnown RBP25.8■■□□□ 1.72
EDEM3-206ENST00000474725 USP16Q9Y5T5 823 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms