RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 ITGB4P16144 1822 aa18.95■□□□□ 0.62
EPCAM-205ENST00000474691 CABP4P57796 275 aa18.94■□□□□ 0.62
EPCAM-205ENST00000474691 ITPK1Q13572 414 aa18.94■□□□□ 0.62
EPCAM-205ENST00000474691 AMIGO3Q86WK7 504 aa18.94■□□□□ 0.62
EPCAM-205ENST00000474691 NLGN1Q8N2Q7 840 aa18.94■□□□□ 0.62
EPCAM-205ENST00000474691 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
EPCAM-205ENST00000474691 ERVV-2B6SEH9 535 aa18.93■□□□□ 0.62
EPCAM-205ENST00000474691 RFC4P35249 363 aa18.93■□□□□ 0.62
EPCAM-205ENST00000474691 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
EPCAM-205ENST00000474691 DCAF5Q96JK2 942 aa18.93■□□□□ 0.62
EPCAM-205ENST00000474691 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
EPCAM-205ENST00000474691 TOGARAM1Q9Y4F4 1720 aa18.92■□□□□ 0.62
EPCAM-205ENST00000474691 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
EPCAM-205ENST00000474691 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
EPCAM-205ENST00000474691 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
EPCAM-205ENST00000474691 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
EPCAM-205ENST00000474691 TGFB2P61812 414 aa18.91■□□□□ 0.62
EPCAM-205ENST00000474691 ZNF530Q6P9A1 599 aaPredicted RBP18.91■□□□□ 0.62
EPCAM-205ENST00000474691 PARP3Q9Y6F1 533 aa18.91■□□□□ 0.62
EPCAM-205ENST00000474691 HSPA6P17066 643 aa18.9■□□□□ 0.62
EPCAM-205ENST00000474691 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.62
EPCAM-205ENST00000474691 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.61
EPCAM-205ENST00000474691 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
EPCAM-205ENST00000474691 MTHFSP49914 203 aa18.89■□□□□ 0.61
EPCAM-205ENST00000474691 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
EPCAM-205ENST00000474691 RC3H1Q5TC82 1133 aaKnown RBP18.88■□□□□ 0.61
EPCAM-205ENST00000474691 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
EPCAM-205ENST00000474691 PANK3Q9H999 370 aa18.88■□□□□ 0.61
EPCAM-205ENST00000474691 PLEKHG2Q9H7P9 1386 aa18.88■□□□□ 0.61
EPCAM-205ENST00000474691 A0A0G2JLW4 131 aa18.87■□□□□ 0.61
EPCAM-205ENST00000474691 ARHGEF1Q92888 912 aaKnown RBP18.87■□□□□ 0.61
EPCAM-205ENST00000474691 ADCY9O60503 1353 aa18.86■□□□□ 0.61
EPCAM-205ENST00000474691 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
EPCAM-205ENST00000474691 PTCD1O75127 700 aaKnown RBP18.86■□□□□ 0.61
EPCAM-205ENST00000474691 RPS6KA4O75676 772 aa18.86■□□□□ 0.61
EPCAM-205ENST00000474691 FCHSD2O94868 740 aa18.86■□□□□ 0.61
EPCAM-205ENST00000474691 CNTNAP4Q9C0A0 1308 aa18.85■□□□□ 0.61
EPCAM-205ENST00000474691 IFFO2Q5TF58 517 aa18.84■□□□□ 0.61
EPCAM-205ENST00000474691 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
EPCAM-205ENST00000474691 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
EPCAM-205ENST00000474691 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.6
EPCAM-205ENST00000474691 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
EPCAM-205ENST00000474691 GYS1P13807 737 aa18.82■□□□□ 0.6
EPCAM-205ENST00000474691 DPEP1P16444 411 aa18.82■□□□□ 0.6
EPCAM-205ENST00000474691 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
EPCAM-205ENST00000474691 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
EPCAM-205ENST00000474691 KDRP35968 1356 aa18.81■□□□□ 0.6
EPCAM-205ENST00000474691 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
EPCAM-205ENST00000474691 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
EPCAM-205ENST00000474691 PXDNLA1KZ92 1463 aa18.81■□□□□ 0.6
EPCAM-205ENST00000474691 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
EPCAM-205ENST00000474691 KIF3CO14782 793 aa18.8■□□□□ 0.6
EPCAM-205ENST00000474691 CRKLP46109 303 aaKnown RBP18.8■□□□□ 0.6
EPCAM-205ENST00000474691 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
EPCAM-205ENST00000474691 ZPR1O75312 459 aa18.79■□□□□ 0.6
EPCAM-205ENST00000474691 TOMM70O94826 608 aa18.79■□□□□ 0.6
EPCAM-205ENST00000474691 APLP1P51693 650 aa18.79■□□□□ 0.6
EPCAM-205ENST00000474691 DALRD3Q5D0E6 543 aaKnown RBP18.78■□□□□ 0.6
EPCAM-205ENST00000474691 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
EPCAM-205ENST00000474691 C10orf71Q711Q0 1435 aa18.77■□□□□ 0.6
EPCAM-205ENST00000474691 C9orf131Q5VYM1 1079 aa18.76■□□□□ 0.59
EPCAM-205ENST00000474691 KDM6AO15550 1401 aaPredicted RBP18.75■□□□□ 0.59
EPCAM-205ENST00000474691 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
EPCAM-205ENST00000474691 SRP68Q9UHB9 627 aaKnown RBP18.75■□□□□ 0.59
EPCAM-205ENST00000474691 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
EPCAM-205ENST00000474691 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
EPCAM-205ENST00000474691 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
EPCAM-205ENST00000474691 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
EPCAM-205ENST00000474691 FKBP8Q14318 412 aa18.73■□□□□ 0.59
EPCAM-205ENST00000474691 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
EPCAM-205ENST00000474691 C4AP0C0L4 1744 aa18.73■□□□□ 0.59
EPCAM-205ENST00000474691 SLC52A2Q9HAB3 445 aa18.72■□□□□ 0.59
EPCAM-205ENST00000474691 RNF181Q9P0P0 153 aa18.72■□□□□ 0.59
EPCAM-205ENST00000474691 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
EPCAM-205ENST00000474691 IL13P35225 146 aa18.71■□□□□ 0.59
EPCAM-205ENST00000474691 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
EPCAM-205ENST00000474691 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
EPCAM-205ENST00000474691 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
EPCAM-205ENST00000474691 HMOX1P09601 288 aa18.69■□□□□ 0.58
EPCAM-205ENST00000474691 KCNA3P22001 575 aa18.69■□□□□ 0.58
EPCAM-205ENST00000474691 CHRNA5P30532 468 aa18.69■□□□□ 0.58
EPCAM-205ENST00000474691 NPM2Q86SE8 214 aaKnown RBP18.69■□□□□ 0.58
EPCAM-205ENST00000474691 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
EPCAM-205ENST00000474691 RBM46Q8TBY0 533 aaKnown RBP18.69■□□□□ 0.58
EPCAM-205ENST00000474691 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
EPCAM-205ENST00000474691 DDR1Q08345 913 aa18.68■□□□□ 0.58
EPCAM-205ENST00000474691 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
EPCAM-205ENST00000474691 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
EPCAM-205ENST00000474691 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
EPCAM-205ENST00000474691 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
EPCAM-205ENST00000474691 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
EPCAM-205ENST00000474691 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
EPCAM-205ENST00000474691 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
EPCAM-205ENST00000474691 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
EPCAM-205ENST00000474691 NPHP1O15259 732 aa18.65■□□□□ 0.58
EPCAM-205ENST00000474691 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
EPCAM-205ENST00000474691 TM4SF1P30408 202 aa18.65■□□□□ 0.58
EPCAM-205ENST00000474691 FSTL1Q12841 308 aa18.65■□□□□ 0.58
EPCAM-205ENST00000474691 STARD3NLO95772 234 aa18.64■□□□□ 0.57
EPCAM-205ENST00000474691 CYP19A1P11511 503 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms