RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 TLR1Q15399 786 aa8.56□□□□□ -1.04
UFD1-207ENST00000474226 GNASQ5JWF2 1037 aa8.56□□□□□ -1.04
UFD1-207ENST00000474226 FNBP4Q8N3X1 1017 aaPredicted RBP8.56□□□□□ -1.04
UFD1-207ENST00000474226 CNTNAP3BQ96NU0 1288 aa8.56□□□□□ -1.04
UFD1-207ENST00000474226 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
UFD1-207ENST00000474226 USP17L5A8MUK1 530 aa8.55□□□□□ -1.04
UFD1-207ENST00000474226 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
UFD1-207ENST00000474226 KRT76Q01546 638 aa8.55□□□□□ -1.04
UFD1-207ENST00000474226 TRIM22Q8IYM9 498 aa8.55□□□□□ -1.04
UFD1-207ENST00000474226 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
UFD1-207ENST00000474226 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
UFD1-207ENST00000474226 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
UFD1-207ENST00000474226 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
UFD1-207ENST00000474226 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
UFD1-207ENST00000474226 A6NJR5 290 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 H7C1W4 665 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 GTF2IP78347 998 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 DBN1Q16643 649 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
UFD1-207ENST00000474226 RHBDD1Q8TEB9 315 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 GLMNQ92990 594 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 ZNF837Q96EG3 531 aaPredicted RBP8.53□□□□□ -1.04
UFD1-207ENST00000474226 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
UFD1-207ENST00000474226 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 F11P03951 625 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 SMTNP53814 917 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 PSME1Q06323 249 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 TBC1D9Q6ZT07 1266 aa8.52□□□□□ -1.05
UFD1-207ENST00000474226 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 ATP9BO43861 1147 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 GPAMQ9HCL2 828 aa8.51□□□□□ -1.05
UFD1-207ENST00000474226 TRIM50Q86XT4 487 aa8.5□□□□□ -1.05
UFD1-207ENST00000474226 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
UFD1-207ENST00000474226 GPR25O00155 361 aa8.49□□□□□ -1.05
UFD1-207ENST00000474226 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
UFD1-207ENST00000474226 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
UFD1-207ENST00000474226 NUCKS1Q9H1E3 243 aaKnown RBP8.49□□□□□ -1.05
UFD1-207ENST00000474226 A6NJY4 79 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 BACH1O14867 736 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 GAS6Q14393 721 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
UFD1-207ENST00000474226 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 NIFKQ9BYG3 293 aaKnown RBP8.48□□□□□ -1.05
UFD1-207ENST00000474226 DCAF1Q9Y4B6 1507 aa8.48□□□□□ -1.05
UFD1-207ENST00000474226 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 MSX1P28360 303 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 ATP1A2P50993 1020 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 MTFR1Q15390 333 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 PGBD3Q8N328 593 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
UFD1-207ENST00000474226 ZNF358Q9NW07 568 aa8.47□□□□□ -1.05
UFD1-207ENST00000474226 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
UFD1-207ENST00000474226 SLURP2P0DP57 97 aa8.46□□□□□ -1.06
UFD1-207ENST00000474226 RUBCNLQ9H714 662 aa8.46□□□□□ -1.06
UFD1-207ENST00000474226 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
UFD1-207ENST00000474226 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
UFD1-207ENST00000474226 CLDN10P78369 228 aa8.45□□□□□ -1.06
UFD1-207ENST00000474226 SRSF11Q05519 484 aaKnown RBP8.45□□□□□ -1.06
UFD1-207ENST00000474226 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
UFD1-207ENST00000474226 AIDAQ96BJ3 306 aa8.45□□□□□ -1.06
UFD1-207ENST00000474226 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
UFD1-207ENST00000474226 DNAAF2Q9NVR5 837 aaKnown RBP8.45□□□□□ -1.06
UFD1-207ENST00000474226 IQSEC3Q9UPP2 1182 aaPredicted RBP8.45□□□□□ -1.06
UFD1-207ENST00000474226 ZBTB7BO15156 539 aaPredicted RBP8.44□□□□□ -1.06
UFD1-207ENST00000474226 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 THBS1P07996 1170 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 LBRQ14739 615 aaKnown RBP8.44□□□□□ -1.06
UFD1-207ENST00000474226 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 OGFOD1Q8N543 542 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
UFD1-207ENST00000474226 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
UFD1-207ENST00000474226 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
UFD1-207ENST00000474226 EFHC2Q5JST6 749 aa8.43□□□□□ -1.06
UFD1-207ENST00000474226 ZNF385CQ66K41 422 aaPredicted RBP8.43□□□□□ -1.06
UFD1-207ENST00000474226 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
UFD1-207ENST00000474226 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
UFD1-207ENST00000474226 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
UFD1-207ENST00000474226 SCHIP1Q9P0W5 487 aaPredicted RBP8.43□□□□□ -1.06
UFD1-207ENST00000474226 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
UFD1-207ENST00000474226 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
UFD1-207ENST00000474226 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
UFD1-207ENST00000474226 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
UFD1-207ENST00000474226 CRISPLD1Q9H336 500 aa8.42□□□□□ -1.06
UFD1-207ENST00000474226 ZNF777Q9ULD5 760 aaPredicted RBP8.42□□□□□ -1.06
UFD1-207ENST00000474226 IGF1RP08069 1367 aa8.41□□□□□ -1.06
UFD1-207ENST00000474226 MX2P20592 715 aa8.41□□□□□ -1.06
UFD1-207ENST00000474226 ATP4AP20648 1035 aa8.41□□□□□ -1.06
UFD1-207ENST00000474226 TNS4Q8IZW8 715 aa8.41□□□□□ -1.06
UFD1-207ENST00000474226 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms