RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ATG3Q9NT62 314 aa28.05■■■□□ 2.08
APP-215ENST00000474136 CICQ96RK0 1608 aaPredicted RBP28.04■■■□□ 2.08
APP-215ENST00000474136 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
APP-215ENST00000474136 PHKG2P15735 406 aa28.03■■■□□ 2.08
APP-215ENST00000474136 BCS1LQ9Y276 419 aa28.03■■■□□ 2.08
APP-215ENST00000474136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.088e-9■■□□□ 13.3
APP-215ENST00000474136 WASHC2AQ641Q2 1341 aa28.02■■■□□ 2.08
APP-215ENST00000474136 IFNL2Q8IZJ0 200 aa28.01■■■□□ 2.07
APP-215ENST00000474136 APLP1P51693 650 aa28■■■□□ 2.07
APP-215ENST00000474136 TGFB2P61812 414 aa27.99■■■□□ 2.07
APP-215ENST00000474136 CDCA8Q53HL2 280 aa27.99■■■□□ 2.07
APP-215ENST00000474136 SLC4A9Q96Q91 983 aa27.99■■■□□ 2.07
APP-215ENST00000474136 TRAPPC3LQ5T215 181 aa27.98■■■□□ 2.07
APP-215ENST00000474136 ARHGAP27Q6ZUM4 889 aa27.98■■■□□ 2.07
APP-215ENST00000474136 NMRK2Q9NPI5 230 aa27.98■■■□□ 2.07
APP-215ENST00000474136 RTCBQ9Y3I0 505 aaKnown RBP27.98■■■□□ 2.07
APP-215ENST00000474136 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
APP-215ENST00000474136 TOMM70O94826 608 aa27.97■■■□□ 2.07
APP-215ENST00000474136 DNAJC5GQ8N7S2 189 aa27.97■■■□□ 2.07
APP-215ENST00000474136 C10orf71Q711Q0 1435 aa27.96■■■□□ 2.07
APP-215ENST00000474136 KDRP35968 1356 aa27.96■■■□□ 2.07
APP-215ENST00000474136 DPEP1P16444 411 aa27.96■■■□□ 2.07
APP-215ENST00000474136 N4BP2Q86UW6 1770 aaPredicted RBP27.96■■■□□ 2.07
APP-215ENST00000474136 NLGN1Q8N2Q7 840 aa27.95■■■□□ 2.07
APP-215ENST00000474136 ARHGEF1Q92888 912 aaKnown RBP27.95■■■□□ 2.07
APP-215ENST00000474136 RBM42Q9BTD8 480 aaKnown RBP27.95■■■□□ 2.07
APP-215ENST00000474136 POLKQ9UBT6 870 aa27.95■■■□□ 2.07
APP-215ENST00000474136 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.07
APP-215ENST00000474136 KIF13BQ9NQT8 1826 aa27.95■■■□□ 2.06
APP-215ENST00000474136 FCHSD2O94868 740 aa27.93■■■□□ 2.06
APP-215ENST00000474136 ANKRD26Q9UPS8 1709 aa27.93■■■□□ 2.06
APP-215ENST00000474136 GYS1P13807 737 aa27.92■■■□□ 2.06
APP-215ENST00000474136 EIF4A2Q14240 407 aaKnown RBP27.92■■■□□ 2.06
APP-215ENST00000474136 CCDC87Q9NVE4 849 aa27.92■■■□□ 2.06
APP-215ENST00000474136 RC3H1Q5TC82 1133 aaKnown RBP27.9■■■□□ 2.06
APP-215ENST00000474136 ADRA2BP18089 450 aa27.89■■■□□ 2.05
APP-215ENST00000474136 KCNA3P22001 575 aa27.89■■■□□ 2.05
APP-215ENST00000474136 RFC4P35249 363 aa27.89■■■□□ 2.05
APP-215ENST00000474136 C9orf131Q5VYM1 1079 aa27.89■■■□□ 2.05
APP-215ENST00000474136 PARP3Q9Y6F1 533 aa27.89■■■□□ 2.05
APP-215ENST00000474136 ERVV-2B6SEH9 535 aa27.88■■■□□ 2.05
APP-215ENST00000474136 RPS6KA4O75676 772 aa27.88■■■□□ 2.05
APP-215ENST00000474136 TNNT2P45379 298 aaPredicted RBP27.88■■■□□ 2.05
APP-215ENST00000474136 CNTNAP4Q9C0A0 1308 aa27.87■■■□□ 2.05
APP-215ENST00000474136 HTRA3P83110 453 aa27.87■■■□□ 2.05
APP-215ENST00000474136 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
APP-215ENST00000474136 RBM46Q8TBY0 533 aaKnown RBP27.84■■■□□ 2.05
APP-215ENST00000474136 DCAF5Q96JK2 942 aa27.84■■■□□ 2.05
APP-215ENST00000474136 SRP68Q9UHB9 627 aaKnown RBP27.83■■■□□ 2.05
APP-215ENST00000474136 KDM6AO15550 1401 aaPredicted RBP27.82■■■□□ 2.04
APP-215ENST00000474136 CABP4P57796 275 aa27.81■■■□□ 2.04
APP-215ENST00000474136 PIM2Q9P1W9 311 aa27.81■■■□□ 2.04
APP-215ENST00000474136 COL5A3P25940 1745 aaPredicted RBP27.8■■■□□ 2.04
APP-215ENST00000474136 PTCD1O75127 700 aaKnown RBP27.8■■■□□ 2.04
APP-215ENST00000474136 HSP90AB1P08238 724 aaKnown RBP27.8■■■□□ 2.04
APP-215ENST00000474136 ZNF530Q6P9A1 599 aaPredicted RBP27.8■■■□□ 2.04
APP-215ENST00000474136 C16orf71Q8IYS4 520 aaPredicted RBP27.8■■■□□ 2.04
APP-215ENST00000474136 ZNF831Q5JPB2 1677 aa27.8■■■□□ 2.04
APP-215ENST00000474136 BRCA1P38398 1863 aaKnown RBP27.8■■■□□ 2.04
APP-215ENST00000474136 MYH14Q7Z406 1995 aaKnown RBP27.79■■■□□ 2.04
APP-215ENST00000474136 DDR1Q08345 913 aa27.79■■■□□ 2.04
APP-215ENST00000474136 FKBP8Q14318 412 aa27.79■■■□□ 2.04
APP-215ENST00000474136 PLEKHO1Q53GL0 409 aaPredicted RBP27.79■■■□□ 2.04
APP-215ENST00000474136 KCPQ6ZWJ8 1503 aa27.79■■■□□ 2.04
APP-215ENST00000474136 PLEKHG2Q9H7P9 1386 aa27.79■■■□□ 2.04
APP-215ENST00000474136 CRKLP46109 303 aaKnown RBP27.78■■■□□ 2.04
APP-215ENST00000474136 KLRG1Q96E93 195 aa27.78■■■□□ 2.04
APP-215ENST00000474136 RNF181Q9P0P0 153 aa27.78■■■□□ 2.04
APP-215ENST00000474136 WDR90Q96KV7 1748 aa27.77■■■□□ 2.04
APP-215ENST00000474136 CHRNA5P30532 468 aa27.77■■■□□ 2.04
APP-215ENST00000474136 DALRD3Q5D0E6 543 aaKnown RBP27.77■■■□□ 2.04
APP-215ENST00000474136 POLR3GLQ9BT43 218 aa27.77■■■□□ 2.04
APP-215ENST00000474136 RRAGCQ9HB90 399 aa27.75■■■□□ 2.03
APP-215ENST00000474136 USP42Q9H9J4 1324 aaKnown RBP27.75■■■□□ 2.03
APP-215ENST00000474136 MTHFSP49914 203 aa27.74■■■□□ 2.03
APP-215ENST00000474136 FSTL1Q12841 308 aa27.74■■■□□ 2.03
APP-215ENST00000474136 COL13A1Q5TAT6 717 aaPredicted RBP27.74■■■□□ 2.03
APP-215ENST00000474136 AEBP1Q8IUX7 1158 aa27.73■■■□□ 2.03
APP-215ENST00000474136 NFATC2IPQ8NCF5 419 aa27.73■■■□□ 2.03
APP-215ENST00000474136 KDM2BQ8NHM5 1336 aa27.73■■■□□ 2.03
APP-215ENST00000474136 ARFGEF1Q9Y6D6 1849 aa27.73■■■□□ 2.03
APP-215ENST00000474136 AMOTQ4VCS5 1084 aa27.72■■■□□ 2.03
APP-215ENST00000474136 JMYQ8N9B5 988 aa27.72■■■□□ 2.03
APP-215ENST00000474136 POLRMTO00411 1230 aaKnown RBP27.69■■■□□ 2.02
APP-215ENST00000474136 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
APP-215ENST00000474136 INTS5Q6P9B9 1019 aaKnown RBP27.69■■■□□ 2.02
APP-215ENST00000474136 TM4SF1P30408 202 aa27.67■■■□□ 2.02
APP-215ENST00000474136 RASSF7Q02833 373 aa27.67■■■□□ 2.02
APP-215ENST00000474136 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
APP-215ENST00000474136 CAPN15O75808 1086 aa27.65■■■□□ 2.02
APP-215ENST00000474136 TJP1Q07157 1748 aa27.65■■■□□ 2.02
APP-215ENST00000474136 DNAJC10Q8IXB1 793 aa27.65■■■□□ 2.02
APP-215ENST00000474136 SULT6B1Q6IMI4 303 aa27.63■■■□□ 2.01
APP-215ENST00000474136 SMC1BQ8NDV3 1235 aa27.63■■■□□ 2.01
APP-215ENST00000474136 ZPR1O75312 459 aa27.62■■■□□ 2.01
APP-215ENST00000474136 PRELPP51888 382 aa27.62■■■□□ 2.01
APP-215ENST00000474136 PANK3Q9H999 370 aa27.62■■■□□ 2.01
APP-215ENST00000474136 PCNTO95613 3336 aa27.62■■■□□ 2.01
APP-215ENST00000474136 ADAMTS7Q9UKP4 1686 aa27.61■■■□□ 2.01
APP-215ENST00000474136 SOS1Q07889 1333 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms