RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 MEIS3Q99687 375 aa26.35■■□□□ 1.81
RNF220-209ENST00000474064 NPHP3Q7Z494 1330 aa26.35■■□□□ 1.81
RNF220-209ENST00000474064 AKAP4Q5JQC9 854 aa26.35■■□□□ 1.81
RNF220-209ENST00000474064 DCCP43146 1447 aa26.34■■□□□ 1.81
RNF220-209ENST00000474064 CEMIPQ8WUJ3 1361 aa26.34■■□□□ 1.81
RNF220-209ENST00000474064 MED1Q15648 1581 aaPredicted RBP26.34■■□□□ 1.81
RNF220-209ENST00000474064 C1orf141Q5JVX7 400 aa26.34■■□□□ 1.81
RNF220-209ENST00000474064 GCC1Q96CN9 775 aa26.34■■□□□ 1.81
RNF220-209ENST00000474064 TEFQ10587 303 aa26.33■■□□□ 1.81
RNF220-209ENST00000474064 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.81
RNF220-209ENST00000474064 ZMYND15Q9H091 742 aa26.33■■□□□ 1.81
RNF220-209ENST00000474064 KCNQ3O43525 872 aa26.33■■□□□ 1.81
RNF220-209ENST00000474064 ERBB3P21860 1342 aa26.33■■□□□ 1.8
RNF220-209ENST00000474064 FLIIQ13045 1269 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 CHRNA2Q15822 529 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 AMOTQ4VCS5 1084 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 NLRP2Q9NX02 1062 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 XRCC6P12956 609 aaKnown RBP eCLIP26.32■■□□□ 1.8
RNF220-209ENST00000474064 EIF2S2P20042 333 aaKnown RBP26.32■■□□□ 1.8
RNF220-209ENST00000474064 PXDNQ92626 1479 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 ALS2Q96Q42 1657 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
RNF220-209ENST00000474064 BABAM1Q9NWV8 329 aa26.31■■□□□ 1.8
RNF220-209ENST00000474064 VIRMAQ69YN4 1812 aaKnown RBP26.31■■□□□ 1.8
RNF220-209ENST00000474064 HDGFL1Q5TGJ6 251 aa26.31■■□□□ 1.8
RNF220-209ENST00000474064 RGPD5Q99666 1765 aa26.3■■□□□ 1.8
RNF220-209ENST00000474064 BTBD11A6QL63 1104 aa26.3■■□□□ 1.8
RNF220-209ENST00000474064 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
RNF220-209ENST00000474064 HSP90AA2PQ14568 343 aaPredicted RBP26.29■■□□□ 1.8
RNF220-209ENST00000474064 ANTXR1Q9H6X2 564 aa26.29■■□□□ 1.8
RNF220-209ENST00000474064 LMTK3Q96Q04 1460 aa26.29■■□□□ 1.8
RNF220-209ENST00000474064 RNMTO43148 476 aaKnown RBP26.28■■□□□ 1.8
RNF220-209ENST00000474064 CSB-PGBD3P0DP91 1061 aa26.28■■□□□ 1.8
RNF220-209ENST00000474064 EIF4A1P60842 406 aaKnown RBP26.28■■□□□ 1.8
RNF220-209ENST00000474064 CEP85Q6P2H3 762 aa26.27■■□□□ 1.8
RNF220-209ENST00000474064 GOLGA6L3A6NEY3 463 aa26.27■■□□□ 1.8
RNF220-209ENST00000474064 BRINP3Q76B58 766 aa26.27■■□□□ 1.8
RNF220-209ENST00000474064 PANK2Q9BZ23 570 aa26.27■■□□□ 1.8
RNF220-209ENST00000474064 CLCN1P35523 988 aa26.26■■□□□ 1.79
RNF220-209ENST00000474064 CCT4P50991 539 aaKnown RBP26.26■■□□□ 1.79
RNF220-209ENST00000474064 ANKRD44Q8N8A2 993 aa26.26■■□□□ 1.79
RNF220-209ENST00000474064 TNS3Q68CZ2 1445 aa26.26■■□□□ 1.79
RNF220-209ENST00000474064 PHAXQ9H814 394 aaKnown RBP26.26■■□□□ 1.79
RNF220-209ENST00000474064 UPF2Q9HAU5 1272 aaKnown RBP26.26■■□□□ 1.79
RNF220-209ENST00000474064 APBB1O00213 710 aa26.25■■□□□ 1.79
RNF220-209ENST00000474064 NCAPD2Q15021 1401 aa26.25■■□□□ 1.79
RNF220-209ENST00000474064 SPATA31A3Q5VYP0 1347 aa26.25■■□□□ 1.79
RNF220-209ENST00000474064 ATP10DQ9P241 1426 aa26.25■■□□□ 1.79
RNF220-209ENST00000474064 HSP90AA1P07900 732 aaKnown RBP26.24■■□□□ 1.79
RNF220-209ENST00000474064 RAPGEF4Q8WZA2 1011 aa26.24■■□□□ 1.79
RNF220-209ENST00000474064 GZF1Q9H116 711 aaPredicted RBP26.24■■□□□ 1.79
RNF220-209ENST00000474064 RPAP2Q8IXW5 612 aaPredicted RBP26.23■■□□□ 1.79
RNF220-209ENST00000474064 DCTPP1Q9H773 170 aa26.23■■□□□ 1.79
RNF220-209ENST00000474064 MFAP1P55081 439 aaKnown RBP26.23■■□□□ 1.79
RNF220-209ENST00000474064 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
RNF220-209ENST00000474064 SOS1Q07889 1333 aaPredicted RBP26.22■■□□□ 1.79
RNF220-209ENST00000474064 STRCQ7RTU9 1775 aa26.21■■□□□ 1.79
RNF220-209ENST00000474064 ANXA1P04083 346 aa26.21■■□□□ 1.79
RNF220-209ENST00000474064 LMO7Q8WWI1 1683 aa26.21■■□□□ 1.79
RNF220-209ENST00000474064 FSD2A1L4K1 749 aa26.21■■□□□ 1.79
RNF220-209ENST00000474064 RRP9O43818 475 aaKnown RBP26.21■■□□□ 1.79
RNF220-209ENST00000474064 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
RNF220-209ENST00000474064 XIRP1Q702N8 1843 aaKnown RBP26.2■■□□□ 1.79
RNF220-209ENST00000474064 SLAIN2Q9P270 581 aa26.2■■□□□ 1.78
RNF220-209ENST00000474064 C16orf71Q8IYS4 520 aaPredicted RBP26.18■■□□□ 1.78
RNF220-209ENST00000474064 TATP17735 454 aaPredicted RBP26.18■■□□□ 1.78
RNF220-209ENST00000474064 TBC1D32Q96NH3 1257 aa26.17■■□□□ 1.78
RNF220-209ENST00000474064 SMARCA5O60264 1052 aaPredicted RBP26.17■■□□□ 1.78
RNF220-209ENST00000474064 TBC1D2Q9BYX2 928 aa26.17■■□□□ 1.78
RNF220-209ENST00000474064 GNAI2P04899 355 aa26.16■■□□□ 1.78
RNF220-209ENST00000474064 CAMTA1Q9Y6Y1 1673 aa26.16■■□□□ 1.78
RNF220-209ENST00000474064 PRAMEF22A3QJZ6 481 aa26.16■■□□□ 1.78
RNF220-209ENST00000474064 SPRYD3Q8NCJ5 442 aa26.16■■□□□ 1.78
RNF220-209ENST00000474064 BMP2KLQ5H9B9 411 aa26.15■■□□□ 1.78
RNF220-209ENST00000474064 KDM3BQ7LBC6 1761 aa26.14■■□□□ 1.78
RNF220-209ENST00000474064 MCM4P33991 863 aa26.14■■□□□ 1.77
RNF220-209ENST00000474064 MEGF6O75095 1541 aa26.14■■□□□ 1.77
RNF220-209ENST00000474064 OTUD7AQ8TE49 926 aaPredicted RBP26.13■■□□□ 1.77
RNF220-209ENST00000474064 HOXB7P09629 217 aa26.13■■□□□ 1.77
RNF220-209ENST00000474064 SLC39A6Q13433 755 aa26.13■■□□□ 1.77
RNF220-209ENST00000474064 HMMRO75330 724 aa26.12■■□□□ 1.77
RNF220-209ENST00000474064 SPG7Q9UQ90 795 aa26.12■■□□□ 1.77
RNF220-209ENST00000474064 GNAI3P08754 354 aa26.12■■□□□ 1.77
RNF220-209ENST00000474064 PLEKHM2Q8IWE5 1019 aa26.12■■□□□ 1.77
RNF220-209ENST00000474064 GIGYF1O75420 1035 aaPredicted RBP26.11■■□□□ 1.77
RNF220-209ENST00000474064 PHKG2P15735 406 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 C22orf23Q9BZE7 217 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 PRDM11Q9NQV5 511 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 COL18A1P39060 1754 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 PI4KAP2A4QPH2 592 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 PI4KAP1Q8N8J0 262 aa26.11■■□□□ 1.77
RNF220-209ENST00000474064 LRRFIP2Q9Y608 721 aaKnown RBP26.11■■□□□ 1.77
RNF220-209ENST00000474064 NFATC2IPQ8NCF5 419 aa26.1■■□□□ 1.77
RNF220-209ENST00000474064 USP44Q9H0E7 712 aa26.1■■□□□ 1.77
RNF220-209ENST00000474064 PROSER3Q2NL68 480 aa26.09■■□□□ 1.77
RNF220-209ENST00000474064 EXOC6BQ9Y2D4 811 aa26.09■■□□□ 1.77
RNF220-209ENST00000474064 PNMA6EA0A0J9YXQ4 647 aa26.08■■□□□ 1.77
RNF220-209ENST00000474064 SRCIN1Q9C0H9 1055 aa26.08■■□□□ 1.77
RNF220-209ENST00000474064 CACNA1FO60840 1977 aa26.08■■□□□ 1.77
RNF220-209ENST00000474064 OVOS2A0A0G2JMS6 1433 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms