RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
PHF20-209ENST00000473943 SSFA2P28290 1259 aa18.86■□□□□ 0.61
PHF20-209ENST00000473943 ITPK1Q13572 414 aa18.85■□□□□ 0.61
PHF20-209ENST00000473943 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
PHF20-209ENST00000473943 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
PHF20-209ENST00000473943 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
PHF20-209ENST00000473943 C4BP0C0L5 1744 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 COL24A1Q17RW2 1714 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 GNPATO15228 680 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 PER1O15534 1290 aaPredicted RBP18.84■□□□□ 0.61
PHF20-209ENST00000473943 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 TAF1LQ8IZX4 1826 aa18.84■□□□□ 0.61
PHF20-209ENST00000473943 KDRP35968 1356 aa18.82■□□□□ 0.6
PHF20-209ENST00000473943 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
PHF20-209ENST00000473943 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
PHF20-209ENST00000473943 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
PHF20-209ENST00000473943 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
PHF20-209ENST00000473943 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
PHF20-209ENST00000473943 RTCBQ9Y3I0 505 aaKnown RBP18.8■□□□□ 0.6
PHF20-209ENST00000473943 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
PHF20-209ENST00000473943 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
PHF20-209ENST00000473943 HMOX1P09601 288 aa18.79■□□□□ 0.6
PHF20-209ENST00000473943 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
PHF20-209ENST00000473943 TRAPPC3LQ5T215 181 aa18.79■□□□□ 0.6
PHF20-209ENST00000473943 ZNF784Q8NCA9 323 aaPredicted RBP18.79■□□□□ 0.6
PHF20-209ENST00000473943 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
PHF20-209ENST00000473943 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
PHF20-209ENST00000473943 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
PHF20-209ENST00000473943 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
PHF20-209ENST00000473943 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
PHF20-209ENST00000473943 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
PHF20-209ENST00000473943 ADRA2BP18089 450 aa18.75■□□□□ 0.59
PHF20-209ENST00000473943 CNTNAP4Q9C0A0 1308 aa18.74■□□□□ 0.59
PHF20-209ENST00000473943 RPS6KA4O75676 772 aa18.74■□□□□ 0.59
PHF20-209ENST00000473943 RFC4P35249 363 aa18.74■□□□□ 0.59
PHF20-209ENST00000473943 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
PHF20-209ENST00000473943 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
PHF20-209ENST00000473943 CHD4Q14839 1912 aa18.73■□□□□ 0.59
PHF20-209ENST00000473943 MMP10P09238 476 aa18.73■□□□□ 0.59
PHF20-209ENST00000473943 SLC52A2Q9HAB3 445 aa18.73■□□□□ 0.59
PHF20-209ENST00000473943 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
PHF20-209ENST00000473943 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
PHF20-209ENST00000473943 RNMTO43148 476 aaKnown RBP18.72■□□□□ 0.59
PHF20-209ENST00000473943 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
PHF20-209ENST00000473943 CRKLP46109 303 aaKnown RBP18.7■□□□□ 0.58
PHF20-209ENST00000473943 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
PHF20-209ENST00000473943 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
PHF20-209ENST00000473943 GYS1P13807 737 aa18.68■□□□□ 0.58
PHF20-209ENST00000473943 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
PHF20-209ENST00000473943 WWC3Q9ULE0 1092 aa18.67■□□□□ 0.58
PHF20-209ENST00000473943 DNAJC10Q8IXB1 793 aa18.66■□□□□ 0.58
PHF20-209ENST00000473943 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
PHF20-209ENST00000473943 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
PHF20-209ENST00000473943 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
PHF20-209ENST00000473943 INTS5Q6P9B9 1019 aaKnown RBP18.65■□□□□ 0.58
PHF20-209ENST00000473943 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
PHF20-209ENST00000473943 COL5A3P25940 1745 aaPredicted RBP18.64■□□□□ 0.57
PHF20-209ENST00000473943 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
PHF20-209ENST00000473943 TGFB2P61812 414 aa18.64■□□□□ 0.57
PHF20-209ENST00000473943 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
PHF20-209ENST00000473943 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
PHF20-209ENST00000473943 TEFQ10587 303 aa18.63■□□□□ 0.57
PHF20-209ENST00000473943 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
PHF20-209ENST00000473943 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
PHF20-209ENST00000473943 ZPR1O75312 459 aa18.62■□□□□ 0.57
PHF20-209ENST00000473943 CYP19A1P11511 503 aaPredicted RBP18.62■□□□□ 0.57
PHF20-209ENST00000473943 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
PHF20-209ENST00000473943 MRC1P22897 1456 aa18.62■□□□□ 0.57
PHF20-209ENST00000473943 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
PHF20-209ENST00000473943 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
PHF20-209ENST00000473943 FKBP8Q14318 412 aa18.61■□□□□ 0.57
PHF20-209ENST00000473943 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
PHF20-209ENST00000473943 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
PHF20-209ENST00000473943 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
PHF20-209ENST00000473943 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
PHF20-209ENST00000473943 C1QTNF8P60827 252 aa18.6■□□□□ 0.57
PHF20-209ENST00000473943 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
PHF20-209ENST00000473943 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
PHF20-209ENST00000473943 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
PHF20-209ENST00000473943 STARD3NLO95772 234 aa18.59■□□□□ 0.57
PHF20-209ENST00000473943 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
PHF20-209ENST00000473943 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
PHF20-209ENST00000473943 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
PHF20-209ENST00000473943 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
PHF20-209ENST00000473943 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
PHF20-209ENST00000473943 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
PHF20-209ENST00000473943 BCS1LQ9Y276 419 aa18.58■□□□□ 0.56
PHF20-209ENST00000473943 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.56
PHF20-209ENST00000473943 TJP1Q07157 1748 aa18.57■□□□□ 0.56
PHF20-209ENST00000473943 DPEP1P16444 411 aa18.57■□□□□ 0.56
PHF20-209ENST00000473943 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
PHF20-209ENST00000473943 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
PHF20-209ENST00000473943 KCPQ6ZWJ8 1503 aa18.56■□□□□ 0.56
PHF20-209ENST00000473943 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
PHF20-209ENST00000473943 DDR1Q08345 913 aa18.56■□□□□ 0.56
PHF20-209ENST00000473943 TEX13AQ9BXU3 409 aaPredicted RBP18.56■□□□□ 0.56
PHF20-209ENST00000473943 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
PHF20-209ENST00000473943 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
PHF20-209ENST00000473943 ADAMTS7Q9UKP4 1686 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms