RNA–Protein interactions for RNA: ENST00000473855.1

TNC-205, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 386 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-205ENST00000473855 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
TNC-205ENST00000473855 FBLN1P23142 703 aa9.38□□□□□ -0.91
TNC-205ENST00000473855 MTHFSP49914 203 aa9.38□□□□□ -0.91
TNC-205ENST00000473855 AMOTQ4VCS5 1084 aa9.38□□□□□ -0.91
TNC-205ENST00000473855 ZCRB1Q8TBF4 217 aaKnown RBP9.38□□□□□ -0.91
TNC-205ENST00000473855 NUDCQ9Y266 331 aa9.38□□□□□ -0.91
TNC-205ENST00000473855 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
TNC-205ENST00000473855 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
TNC-205ENST00000473855 EIF4A2Q14240 407 aaKnown RBP9.37□□□□□ -0.91
TNC-205ENST00000473855 GSE1Q14687 1217 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
TNC-205ENST00000473855 BCL11BQ9C0K0 894 aaPredicted RBP9.37□□□□□ -0.91
TNC-205ENST00000473855 SPON1Q9HCB6 807 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 NCAPD2Q15021 1401 aa9.37□□□□□ -0.91
TNC-205ENST00000473855 PARP4Q9UKK3 1724 aaKnown RBP9.36□□□□□ -0.91
TNC-205ENST00000473855 PLSCR1O15162 318 aa9.36□□□□□ -0.91
TNC-205ENST00000473855 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
TNC-205ENST00000473855 EYA1Q99502 592 aa9.36□□□□□ -0.91
TNC-205ENST00000473855 TMEM106CQ9BVX2 250 aa9.36□□□□□ -0.91
TNC-205ENST00000473855 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
TNC-205ENST00000473855 LTN1O94822 1766 aa9.36□□□□□ -0.91
TNC-205ENST00000473855 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
TNC-205ENST00000473855 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
TNC-205ENST00000473855 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
TNC-205ENST00000473855 MARCH10Q8NA82 808 aaPredicted RBP9.35□□□□□ -0.91
TNC-205ENST00000473855 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
TNC-205ENST00000473855 PCNTO95613 3336 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
TNC-205ENST00000473855 TRIM37O94972 964 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 SEC24BO95487 1268 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 IL13P35225 146 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
TNC-205ENST00000473855 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 PCDHB8Q9UN66 801 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 KDRP35968 1356 aa9.34□□□□□ -0.91
TNC-205ENST00000473855 APBA3O96018 575 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 NEFMP07197 916 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
TNC-205ENST00000473855 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 IER5LQ5T953 404 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 DNAJC5GQ8N7S2 189 aa9.33□□□□□ -0.92
TNC-205ENST00000473855 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
TNC-205ENST00000473855 LRRC37A3O60309 1634 aa9.32□□□□□ -0.92
TNC-205ENST00000473855 KCNQ2O43526 872 aa9.32□□□□□ -0.92
TNC-205ENST00000473855 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
TNC-205ENST00000473855 SPOCK2Q92563 424 aa9.32□□□□□ -0.92
TNC-205ENST00000473855 FCHSD2O94868 740 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 USHBP1Q8N6Y0 703 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 DCAF5Q96JK2 942 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 PEAK1Q9H792 1746 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 MEGF6O75095 1541 aa9.31□□□□□ -0.92
TNC-205ENST00000473855 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
TNC-205ENST00000473855 SMARCC1Q92922 1105 aaPredicted RBP9.3□□□□□ -0.92
TNC-205ENST00000473855 CAMKK2Q96RR4 588 aa9.3□□□□□ -0.92
TNC-205ENST00000473855 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
TNC-205ENST00000473855 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
TNC-205ENST00000473855 PHKG2P15735 406 aa9.29□□□□□ -0.92
TNC-205ENST00000473855 SLC27A3Q5K4L6 730 aa9.29□□□□□ -0.92
TNC-205ENST00000473855 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
TNC-205ENST00000473855 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
TNC-205ENST00000473855 RGPD1P0DJD0 1748 aa9.28□□□□□ -0.92
TNC-205ENST00000473855 CYP27B1O15528 508 aa9.28□□□□□ -0.92
TNC-205ENST00000473855 AKAP4Q5JQC9 854 aa9.28□□□□□ -0.92
TNC-205ENST00000473855 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
TNC-205ENST00000473855 RGPD5Q99666 1765 aa9.27□□□□□ -0.92
TNC-205ENST00000473855 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 BRWD3Q6RI45 1802 aa9.27□□□□□ -0.93
TNC-205ENST00000473855 WNK3Q9BYP7 1800 aa9.27□□□□□ -0.93
TNC-205ENST00000473855 U2AF1L5P0DN76 240 aaPredicted RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 APLP1P51693 650 aa9.27□□□□□ -0.93
TNC-205ENST00000473855 U2AF1Q01081 240 aaKnown RBP eCLIP9.27□□□□□ -0.93
TNC-205ENST00000473855 CNGB1Q14028 1251 aaPredicted RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 EZH2Q15910 746 aaKnown RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 ZNF530Q6P9A1 599 aaPredicted RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
TNC-205ENST00000473855 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
TNC-205ENST00000473855 ANP32CO43423 234 aa9.26□□□□□ -0.93
TNC-205ENST00000473855 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
TNC-205ENST00000473855 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
TNC-205ENST00000473855 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
TNC-205ENST00000473855 CIZ1Q9ULV3 898 aaPredicted RBP9.26□□□□□ -0.93
TNC-205ENST00000473855 SHANK3Q9BYB0 1731 aa9.25□□□□□ -0.93
TNC-205ENST00000473855 HMOX1P09601 288 aa9.25□□□□□ -0.93
TNC-205ENST00000473855 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
TNC-205ENST00000473855 COL3A1P02461 1466 aaPredicted RBP9.25□□□□□ -0.93
TNC-205ENST00000473855 CABP4P57796 275 aa9.24□□□□□ -0.93
TNC-205ENST00000473855 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
TNC-205ENST00000473855 MPRIPQ6WCQ1 1025 aa9.24□□□□□ -0.93
TNC-205ENST00000473855 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms