RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
SMPD4-217ENST00000473720 UTRNP46939 3433 aa16.28■□□□□ 0.2
SMPD4-217ENST00000473720 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
SMPD4-217ENST00000473720 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
SMPD4-217ENST00000473720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
SMPD4-217ENST00000473720 ITPK1Q13572 414 aa16.27■□□□□ 0.2
SMPD4-217ENST00000473720 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
SMPD4-217ENST00000473720 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
SMPD4-217ENST00000473720 GNPATO15228 680 aa16.26■□□□□ 0.19
SMPD4-217ENST00000473720 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-217ENST00000473720 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
SMPD4-217ENST00000473720 ZNF831Q5JPB2 1677 aa16.25■□□□□ 0.19
SMPD4-217ENST00000473720 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
SMPD4-217ENST00000473720 CABP4P57796 275 aa16.25■□□□□ 0.19
SMPD4-217ENST00000473720 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
SMPD4-217ENST00000473720 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-217ENST00000473720 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-217ENST00000473720 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
SMPD4-217ENST00000473720 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-217ENST00000473720 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
SMPD4-217ENST00000473720 MTHFSP49914 203 aa16.24■□□□□ 0.19
SMPD4-217ENST00000473720 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
SMPD4-217ENST00000473720 HMOX1P09601 288 aa16.23■□□□□ 0.19
SMPD4-217ENST00000473720 SSFA2P28290 1259 aa16.23■□□□□ 0.19
SMPD4-217ENST00000473720 IL13P35225 146 aa16.23■□□□□ 0.19
SMPD4-217ENST00000473720 TJP1Q07157 1748 aa16.22■□□□□ 0.19
SMPD4-217ENST00000473720 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
SMPD4-217ENST00000473720 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
SMPD4-217ENST00000473720 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
SMPD4-217ENST00000473720 YBX3P16989 372 aaKnown RBP eCLIP16.21■□□□□ 0.194e-12■■□□□ 11.6
SMPD4-217ENST00000473720 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
SMPD4-217ENST00000473720 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
SMPD4-217ENST00000473720 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
SMPD4-217ENST00000473720 KDRP35968 1356 aa16.2■□□□□ 0.18
SMPD4-217ENST00000473720 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
SMPD4-217ENST00000473720 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
SMPD4-217ENST00000473720 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-217ENST00000473720 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
SMPD4-217ENST00000473720 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-217ENST00000473720 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
SMPD4-217ENST00000473720 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
SMPD4-217ENST00000473720 MMP10P09238 476 aa16.16■□□□□ 0.18
SMPD4-217ENST00000473720 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
SMPD4-217ENST00000473720 LGR6Q9HBX8 967 aa16.16■□□□□ 0.18
SMPD4-217ENST00000473720 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
SMPD4-217ENST00000473720 RFC4P35249 363 aa16.15■□□□□ 0.18
SMPD4-217ENST00000473720 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
SMPD4-217ENST00000473720 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
SMPD4-217ENST00000473720 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
SMPD4-217ENST00000473720 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
SMPD4-217ENST00000473720 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
SMPD4-217ENST00000473720 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
SMPD4-217ENST00000473720 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
SMPD4-217ENST00000473720 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
SMPD4-217ENST00000473720 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
SMPD4-217ENST00000473720 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-217ENST00000473720 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
SMPD4-217ENST00000473720 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
SMPD4-217ENST00000473720 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
SMPD4-217ENST00000473720 SLC52A2Q9HAB3 445 aa16.12■□□□□ 0.17
SMPD4-217ENST00000473720 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
SMPD4-217ENST00000473720 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-217ENST00000473720 GYS1P13807 737 aa16.1■□□□□ 0.17
SMPD4-217ENST00000473720 ADRA2BP18089 450 aa16.1■□□□□ 0.17
SMPD4-217ENST00000473720 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
SMPD4-217ENST00000473720 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
SMPD4-217ENST00000473720 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
SMPD4-217ENST00000473720 MRC1P22897 1456 aa16.1■□□□□ 0.17
SMPD4-217ENST00000473720 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
SMPD4-217ENST00000473720 ARFGEF1Q9Y6D6 1849 aa16.09■□□□□ 0.17
SMPD4-217ENST00000473720 DLG5Q8TDM6 1919 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-217ENST00000473720 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-217ENST00000473720 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.16
SMPD4-217ENST00000473720 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
SMPD4-217ENST00000473720 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
SMPD4-217ENST00000473720 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
SMPD4-217ENST00000473720 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
SMPD4-217ENST00000473720 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
SMPD4-217ENST00000473720 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
SMPD4-217ENST00000473720 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
SMPD4-217ENST00000473720 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
SMPD4-217ENST00000473720 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
SMPD4-217ENST00000473720 ZPR1O75312 459 aa16.05■□□□□ 0.16
SMPD4-217ENST00000473720 FKBP8Q14318 412 aa16.05■□□□□ 0.16
SMPD4-217ENST00000473720 C10orf71Q711Q0 1435 aa16.04■□□□□ 0.16
SMPD4-217ENST00000473720 TEFQ10587 303 aa16.04■□□□□ 0.16
SMPD4-217ENST00000473720 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
SMPD4-217ENST00000473720 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
SMPD4-217ENST00000473720 SBF1O95248 1867 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-217ENST00000473720 DPEP1P16444 411 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
SMPD4-217ENST00000473720 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
SMPD4-217ENST00000473720 TGFB2P61812 414 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms