RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 MTHFSP49914 203 aa28.11■■■□□ 2.09
IMP4-213ENST00000473689 C4BP0C0L5 1744 aa28.11■■■□□ 2.09
IMP4-213ENST00000473689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.1■■■□□ 2.09
IMP4-213ENST00000473689 TAF1LQ8IZX4 1826 aa28.09■■■□□ 2.09
IMP4-213ENST00000473689 SSFA2P28290 1259 aa28.09■■■□□ 2.09
IMP4-213ENST00000473689 SLC4A9Q96Q91 983 aa28.09■■■□□ 2.09
IMP4-213ENST00000473689 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
IMP4-213ENST00000473689 GPR162Q16538 588 aa28.08■■■□□ 2.09
IMP4-213ENST00000473689 PHF14O94880 888 aa28.07■■■□□ 2.08
IMP4-213ENST00000473689 CABP4P57796 275 aa28.07■■■□□ 2.08
IMP4-213ENST00000473689 UTRNP46939 3433 aa28.07■■■□□ 2.08
IMP4-213ENST00000473689 C1orf141Q5JVX7 400 aa28.05■■■□□ 2.08
IMP4-213ENST00000473689 CC2D1BQ5T0F9 858 aaKnown RBP28.05■■■□□ 2.08
IMP4-213ENST00000473689 GNPATO15228 680 aa28.04■■■□□ 2.08
IMP4-213ENST00000473689 CD2APQ9Y5K6 639 aa28.04■■■□□ 2.08
IMP4-213ENST00000473689 NPC1L1Q9UHC9 1359 aa28.03■■■□□ 2.08
IMP4-213ENST00000473689 ZNF784Q8NCA9 323 aaPredicted RBP28.02■■■□□ 2.08
IMP4-213ENST00000473689 NFATC2IPQ8NCF5 419 aa28.02■■■□□ 2.08
IMP4-213ENST00000473689 RBM42Q9BTD8 480 aaKnown RBP28.02■■■□□ 2.08
IMP4-213ENST00000473689 RC3H1Q5TC82 1133 aaKnown RBP28.01■■■□□ 2.07
IMP4-213ENST00000473689 AKAP4Q5JQC9 854 aa27.99■■■□□ 2.07
IMP4-213ENST00000473689 UBR3Q6ZT12 1888 aa27.99■■■□□ 2.07
IMP4-213ENST00000473689 DIAPH1O60610 1272 aaKnown RBP27.98■■■□□ 2.07
IMP4-213ENST00000473689 HMOX1P09601 288 aa27.98■■■□□ 2.07
IMP4-213ENST00000473689 YBX3P16989 372 aaKnown RBP eCLIP27.98■■■□□ 2.072e-12■■□□□ 12
IMP4-213ENST00000473689 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
IMP4-213ENST00000473689 RTCBQ9Y3I0 505 aaKnown RBP27.97■■■□□ 2.07
IMP4-213ENST00000473689 CNTNAP4Q9C0A0 1308 aa27.96■■■□□ 2.07
IMP4-213ENST00000473689 TRAPPC3LQ5T215 181 aa27.96■■■□□ 2.07
IMP4-213ENST00000473689 LGR6Q9HBX8 967 aa27.95■■■□□ 2.06
IMP4-213ENST00000473689 GRIN3BO60391 1043 aa27.94■■■□□ 2.06
IMP4-213ENST00000473689 PTCD1O75127 700 aaKnown RBP27.94■■■□□ 2.06
IMP4-213ENST00000473689 RPS6KA4O75676 772 aa27.94■■■□□ 2.06
IMP4-213ENST00000473689 ZNF831Q5JPB2 1677 aa27.94■■■□□ 2.06
IMP4-213ENST00000473689 ADRA2BP18089 450 aa27.93■■■□□ 2.06
IMP4-213ENST00000473689 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
IMP4-213ENST00000473689 MTHFSDQ2M296 383 aaKnown RBP27.92■■■□□ 2.06
IMP4-213ENST00000473689 SLC52A2Q9HAB3 445 aa27.92■■■□□ 2.06
IMP4-213ENST00000473689 RNMTO43148 476 aaKnown RBP27.91■■■□□ 2.06
IMP4-213ENST00000473689 GOLGB1Q14789 3259 aaKnown RBP27.89■■■□□ 2.06
IMP4-213ENST00000473689 MMP10P09238 476 aa27.89■■■□□ 2.06
IMP4-213ENST00000473689 NLGN1Q8N2Q7 840 aa27.89■■■□□ 2.06
IMP4-213ENST00000473689 CRKLP46109 303 aaKnown RBP27.88■■■□□ 2.05
IMP4-213ENST00000473689 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
IMP4-213ENST00000473689 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
IMP4-213ENST00000473689 GYS1P13807 737 aa27.86■■■□□ 2.05
IMP4-213ENST00000473689 RFC4P35249 363 aa27.85■■■□□ 2.05
IMP4-213ENST00000473689 CHD4Q14839 1912 aa27.84■■■□□ 2.05
IMP4-213ENST00000473689 INTS5Q6P9B9 1019 aaKnown RBP27.84■■■□□ 2.05
IMP4-213ENST00000473689 COL5A3P25940 1745 aaPredicted RBP27.82■■■□□ 2.04
IMP4-213ENST00000473689 U2SURPO15042 1029 aaKnown RBP27.82■■■□□ 2.04
IMP4-213ENST00000473689 SLC39A6Q13433 755 aa27.82■■■□□ 2.04
IMP4-213ENST00000473689 MRC1P22897 1456 aa27.82■■■□□ 2.04
IMP4-213ENST00000473689 DNAJC10Q8IXB1 793 aa27.81■■■□□ 2.04
IMP4-213ENST00000473689 SCN11AQ9UI33 1791 aa27.81■■■□□ 2.04
IMP4-213ENST00000473689 CYP19A1P11511 503 aaPredicted RBP27.78■■■□□ 2.04
IMP4-213ENST00000473689 MYH14Q7Z406 1995 aaKnown RBP27.78■■■□□ 2.04
IMP4-213ENST00000473689 TGFB2P61812 414 aa27.77■■■□□ 2.04
IMP4-213ENST00000473689 IL17REQ8NFR9 667 aa27.77■■■□□ 2.04
IMP4-213ENST00000473689 CCDC87Q9NVE4 849 aa27.77■■■□□ 2.04
IMP4-213ENST00000473689 SRP68Q9UHB9 627 aaKnown RBP27.77■■■□□ 2.04
IMP4-213ENST00000473689 CICQ96RK0 1608 aaPredicted RBP27.77■■■□□ 2.04
IMP4-213ENST00000473689 USP42Q9H9J4 1324 aaKnown RBP27.76■■■□□ 2.03
IMP4-213ENST00000473689 ADAMTS7Q9UKP4 1686 aa27.76■■■□□ 2.03
IMP4-213ENST00000473689 VSIG10Q8N0Z9 540 aa27.76■■■□□ 2.03
IMP4-213ENST00000473689 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
IMP4-213ENST00000473689 GNAT3A8MTJ3 354 aa27.75■■■□□ 2.03
IMP4-213ENST00000473689 CFAP53Q96M91 514 aa27.75■■■□□ 2.03
IMP4-213ENST00000473689 WWC3Q9ULE0 1092 aa27.75■■■□□ 2.03
IMP4-213ENST00000473689 PARP3Q9Y6F1 533 aa27.75■■■□□ 2.03
IMP4-213ENST00000473689 PPP2R1AP30153 589 aa27.74■■■□□ 2.03
IMP4-213ENST00000473689 FKBP8Q14318 412 aa27.74■■■□□ 2.03
IMP4-213ENST00000473689 TJP1Q07157 1748 aa27.74■■■□□ 2.03
IMP4-213ENST00000473689 KCPQ6ZWJ8 1503 aa27.73■■■□□ 2.03
IMP4-213ENST00000473689 PXDNLA1KZ92 1463 aa27.73■■■□□ 2.03
IMP4-213ENST00000473689 PHACTR3Q96KR7 559 aa27.73■■■□□ 2.03
IMP4-213ENST00000473689 RSPH6AQ9H0K4 717 aa27.73■■■□□ 2.03
IMP4-213ENST00000473689 C10orf71Q711Q0 1435 aa27.73■■■□□ 2.03
IMP4-213ENST00000473689 SOS1Q07889 1333 aaPredicted RBP27.72■■■□□ 2.03
IMP4-213ENST00000473689 A0A0G2JLW4 131 aa27.71■■■□□ 2.03
IMP4-213ENST00000473689 TM4SF1P30408 202 aa27.71■■■□□ 2.03
IMP4-213ENST00000473689 PRKAR2BP31323 418 aa27.7■■■□□ 2.02
IMP4-213ENST00000473689 C1QTNF8P60827 252 aa27.7■■■□□ 2.02
IMP4-213ENST00000473689 DDR1Q08345 913 aa27.7■■■□□ 2.02
IMP4-213ENST00000473689 NUDCQ9Y266 331 aa27.7■■■□□ 2.02
IMP4-213ENST00000473689 ZBTB1Q9Y2K1 713 aa27.69■■■□□ 2.02
IMP4-213ENST00000473689 DPEP1P16444 411 aa27.68■■■□□ 2.02
IMP4-213ENST00000473689 TEFQ10587 303 aa27.68■■■□□ 2.02
IMP4-213ENST00000473689 ZPR1O75312 459 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 KCNA3P22001 575 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 USPL1Q5W0Q7 1092 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 ZNF790Q6PG37 636 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 TTC5Q8N0Z6 440 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 CEMIPQ8WUJ3 1361 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 C4AP0C0L4 1744 aa27.67■■■□□ 2.02
IMP4-213ENST00000473689 ADCY9O60503 1353 aa27.66■■■□□ 2.02
IMP4-213ENST00000473689 ZNF496Q96IT1 587 aaPredicted RBP27.66■■■□□ 2.02
IMP4-213ENST00000473689 NARFQ9UHQ1 456 aa27.66■■■□□ 2.02
IMP4-213ENST00000473689 KIF13BQ9NQT8 1826 aa27.65■■■□□ 2.02
IMP4-213ENST00000473689 POLRMTO00411 1230 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms