RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CHL1O00533 1208 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
LMNA-213ENST00000473598 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
LMNA-213ENST00000473598 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
LMNA-213ENST00000473598 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.64
LMNA-213ENST00000473598 SCN11AQ9UI33 1791 aa19.02■□□□□ 0.64
LMNA-213ENST00000473598 BRWD3Q6RI45 1802 aa19.01■□□□□ 0.63
LMNA-213ENST00000473598 WNK3Q9BYP7 1800 aa19.01■□□□□ 0.63
LMNA-213ENST00000473598 DISP2A7MBM2 1401 aa19.01■□□□□ 0.63
LMNA-213ENST00000473598 IL2RBP14784 551 aa19■□□□□ 0.63
LMNA-213ENST00000473598 NBR1Q14596 966 aa19■□□□□ 0.63
LMNA-213ENST00000473598 SHANK3Q9BYB0 1731 aa19■□□□□ 0.63
LMNA-213ENST00000473598 LGR6Q9HBX8 967 aa19■□□□□ 0.63
LMNA-213ENST00000473598 FAM182BQ5T319 152 aa18.99■□□□□ 0.63
LMNA-213ENST00000473598 SIPA1L3O60292 1781 aaPredicted RBP18.99■□□□□ 0.63
LMNA-213ENST00000473598 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
LMNA-213ENST00000473598 MPRIPQ6WCQ1 1025 aa18.98■□□□□ 0.63
LMNA-213ENST00000473598 RNMTO43148 476 aaKnown RBP18.98■□□□□ 0.63
LMNA-213ENST00000473598 PHKG2P15735 406 aa18.98■□□□□ 0.63
LMNA-213ENST00000473598 IFNL2Q8IZJ0 200 aa18.98■□□□□ 0.63
LMNA-213ENST00000473598 BCAR3O75815 825 aa18.97■□□□□ 0.63
LMNA-213ENST00000473598 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
LMNA-213ENST00000473598 BABAM1Q9NWV8 329 aa18.97■□□□□ 0.63
LMNA-213ENST00000473598 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
LMNA-213ENST00000473598 MIS18AQ9NYP9 233 aa18.96■□□□□ 0.63
LMNA-213ENST00000473598 TSPYL4Q9UJ04 414 aa18.96■□□□□ 0.63
LMNA-213ENST00000473598 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
LMNA-213ENST00000473598 CYP27B1O15528 508 aa18.96■□□□□ 0.63
LMNA-213ENST00000473598 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
LMNA-213ENST00000473598 PLIN1O60240 522 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 DDB1Q16531 1140 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
LMNA-213ENST00000473598 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
LMNA-213ENST00000473598 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
LMNA-213ENST00000473598 VAMP4O75379 141 aa18.94■□□□□ 0.62
LMNA-213ENST00000473598 TEFQ10587 303 aa18.94■□□□□ 0.62
LMNA-213ENST00000473598 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
LMNA-213ENST00000473598 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
LMNA-213ENST00000473598 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
LMNA-213ENST00000473598 HSP90AB1P08238 724 aaKnown RBP18.93■□□□□ 0.62
LMNA-213ENST00000473598 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
LMNA-213ENST00000473598 DCAF5Q96JK2 942 aa18.92■□□□□ 0.62
LMNA-213ENST00000473598 TNS2Q63HR2 1409 aa18.92■□□□□ 0.62
LMNA-213ENST00000473598 EXOC5O00471 708 aa18.91■□□□□ 0.62
LMNA-213ENST00000473598 ELL2O00472 640 aaPredicted RBP18.91■□□□□ 0.62
LMNA-213ENST00000473598 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
LMNA-213ENST00000473598 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
LMNA-213ENST00000473598 BCL2L13Q9BXK5 485 aa18.91■□□□□ 0.62
LMNA-213ENST00000473598 MRC1P22897 1456 aa18.9■□□□□ 0.62
LMNA-213ENST00000473598 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
LMNA-213ENST00000473598 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
LMNA-213ENST00000473598 BTBD11A6QL63 1104 aa18.9■□□□□ 0.62
LMNA-213ENST00000473598 SMC4Q9NTJ3 1288 aa18.9■□□□□ 0.62
LMNA-213ENST00000473598 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
LMNA-213ENST00000473598 RTN4Q9NQC3 1192 aaKnown RBP18.89■□□□□ 0.61
LMNA-213ENST00000473598 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
LMNA-213ENST00000473598 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
LMNA-213ENST00000473598 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
LMNA-213ENST00000473598 FRAT1Q92837 279 aaPredicted RBP18.87■□□□□ 0.61
LMNA-213ENST00000473598 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
LMNA-213ENST00000473598 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
LMNA-213ENST00000473598 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
LMNA-213ENST00000473598 TOGARAM1Q9Y4F4 1720 aa18.85■□□□□ 0.61
LMNA-213ENST00000473598 CACNA1FO60840 1977 aa18.85■□□□□ 0.61
LMNA-213ENST00000473598 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
LMNA-213ENST00000473598 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
LMNA-213ENST00000473598 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
LMNA-213ENST00000473598 KIF16BQ96L93 1317 aa18.84■□□□□ 0.61
LMNA-213ENST00000473598 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
LMNA-213ENST00000473598 MRPL50Q8N5N7 158 aaKnown RBP18.84■□□□□ 0.61
LMNA-213ENST00000473598 ERVV-2B6SEH9 535 aa18.83■□□□□ 0.61
LMNA-213ENST00000473598 KCNQ3O43525 872 aa18.83■□□□□ 0.61
LMNA-213ENST00000473598 CABP4P57796 275 aa18.83■□□□□ 0.6
LMNA-213ENST00000473598 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.6
LMNA-213ENST00000473598 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
LMNA-213ENST00000473598 ITGB4P16144 1822 aa18.82■□□□□ 0.6
LMNA-213ENST00000473598 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
LMNA-213ENST00000473598 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
LMNA-213ENST00000473598 NOB1Q9ULX3 412 aaKnown RBP18.82■□□□□ 0.6
LMNA-213ENST00000473598 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
LMNA-213ENST00000473598 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
LMNA-213ENST00000473598 ZNF790Q6PG37 636 aa18.81■□□□□ 0.6
LMNA-213ENST00000473598 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
LMNA-213ENST00000473598 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
LMNA-213ENST00000473598 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
LMNA-213ENST00000473598 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
LMNA-213ENST00000473598 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
LMNA-213ENST00000473598 HOXB7P09629 217 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
LMNA-213ENST00000473598 TRIM37O94972 964 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
LMNA-213ENST00000473598 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 UBR2Q8IWV8 1755 aa18.79■□□□□ 0.6
LMNA-213ENST00000473598 KCNQ2O43526 872 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms