RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 TNNQ9UQP3 1299 aa16.22■□□□□ 0.19
PCCB-211ENST00000473073 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
PCCB-211ENST00000473073 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
PCCB-211ENST00000473073 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
PCCB-211ENST00000473073 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
PCCB-211ENST00000473073 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
PCCB-211ENST00000473073 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
PCCB-211ENST00000473073 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
PCCB-211ENST00000473073 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
PCCB-211ENST00000473073 AFF2P51816 1311 aa16.19■□□□□ 0.18
PCCB-211ENST00000473073 MRC1P22897 1456 aa16.19■□□□□ 0.18
PCCB-211ENST00000473073 FAM98CQ17RN3 349 aaKnown RBP16.19■□□□□ 0.18
PCCB-211ENST00000473073 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
PCCB-211ENST00000473073 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
PCCB-211ENST00000473073 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
PCCB-211ENST00000473073 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
PCCB-211ENST00000473073 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 EXOC5O00471 708 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
PCCB-211ENST00000473073 VPS72Q15906 364 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 CABP4P57796 275 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 ALDH1L2Q3SY69 923 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
PCCB-211ENST00000473073 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
PCCB-211ENST00000473073 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
PCCB-211ENST00000473073 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
PCCB-211ENST00000473073 DDB1Q16531 1140 aa16.17■□□□□ 0.18
PCCB-211ENST00000473073 MRPL50Q8N5N7 158 aaKnown RBP16.17■□□□□ 0.18
PCCB-211ENST00000473073 BARGINQ6ZT62 677 aa16.16■□□□□ 0.18
PCCB-211ENST00000473073 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
PCCB-211ENST00000473073 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 RLBP1P12271 317 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 ZNF790Q6PG37 636 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 A0A0G2JS52 829 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 MYT1Q01538 1121 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 ZKSCAN2Q63HK3 967 aa16.15■□□□□ 0.18
PCCB-211ENST00000473073 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
PCCB-211ENST00000473073 TRIM27P14373 513 aa16.14■□□□□ 0.17
PCCB-211ENST00000473073 KIF16BQ96L93 1317 aa16.14■□□□□ 0.17
PCCB-211ENST00000473073 GLI3P10071 1580 aa16.14■□□□□ 0.17
PCCB-211ENST00000473073 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
PCCB-211ENST00000473073 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
PCCB-211ENST00000473073 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
PCCB-211ENST00000473073 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
PCCB-211ENST00000473073 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
PCCB-211ENST00000473073 C5P01031 1676 aa16.12■□□□□ 0.17
PCCB-211ENST00000473073 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
PCCB-211ENST00000473073 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
PCCB-211ENST00000473073 ITGB4P16144 1822 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 FTSJ3Q8IY81 847 aaKnown RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
PCCB-211ENST00000473073 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
PCCB-211ENST00000473073 ATRNO75882 1429 aa16.1■□□□□ 0.17
PCCB-211ENST00000473073 HEG1Q9ULI3 1381 aa16.1■□□□□ 0.17
PCCB-211ENST00000473073 G2E3Q7L622 706 aa16.1■□□□□ 0.17
PCCB-211ENST00000473073 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
PCCB-211ENST00000473073 PPP4R2Q9NY27 417 aa16.1■□□□□ 0.17
PCCB-211ENST00000473073 PAPPAQ13219 1627 aa16.1■□□□□ 0.17
PCCB-211ENST00000473073 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 PIGBQ92521 554 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 THSD7AQ9UPZ6 1657 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 ANXA1P04083 346 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
PCCB-211ENST00000473073 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
PCCB-211ENST00000473073 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.16
PCCB-211ENST00000473073 QTRT2Q9H974 415 aaKnown RBP16.08■□□□□ 0.16
PCCB-211ENST00000473073 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
PCCB-211ENST00000473073 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.16
PCCB-211ENST00000473073 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
PCCB-211ENST00000473073 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
PCCB-211ENST00000473073 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 KCPQ6ZWJ8 1503 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
PCCB-211ENST00000473073 HOXB7P09629 217 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 EP400Q96L91 3159 aa16.07■□□□□ 0.16
PCCB-211ENST00000473073 BCL9O00512 1426 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 RGS12O14924 1447 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 ITPRIPQ8IWB1 547 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 PHAXQ9H814 394 aaKnown RBP16.06■□□□□ 0.16
PCCB-211ENST00000473073 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
PCCB-211ENST00000473073 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
PCCB-211ENST00000473073 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
PCCB-211ENST00000473073 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms