RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 LARGE2Q8N3Y3 721 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 TMC1Q8TDI8 760 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 SPACA7Q96KW9 195 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 TMEM229AB2RXF0 380 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 MEI1Q5TIA1 1274 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 C1orf216Q8TAB5 229 aa3.92□□□□□ -1.78
XRN1-210ENST00000472697 ZNF526Q8TF50 670 aaPredicted RBP3.92□□□□□ -1.78
XRN1-210ENST00000472697 ZC3H4Q9UPT8 1303 aaKnown RBP3.92□□□□□ -1.78
XRN1-210ENST00000472697 MYO15BQ96JP2 1530 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 TK2O00142 265 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 EIF1AXP47813 144 aaKnown RBP3.91□□□□□ -1.78
XRN1-210ENST00000472697 DSC3Q14574 896 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 DESI1Q6ICB0 168 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 FAM9AQ8IZU1 332 aaPredicted RBP3.91□□□□□ -1.78
XRN1-210ENST00000472697 ZFRQ96KR1 1074 aaKnown RBP3.91□□□□□ -1.78
XRN1-210ENST00000472697 TBX22Q9Y458 520 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 ARHGAP33O14559 1287 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 IRS1P35568 1242 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 BCAMP50895 628 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 FMR1Q06787 632 aaKnown RBP eCLIP3.91□□□□□ -1.78
XRN1-210ENST00000472697 EGFLAMQ63HQ2 1017 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 SCG3Q8WXD2 468 aaKnown RBP3.91□□□□□ -1.78
XRN1-210ENST00000472697 NIF3L1Q9GZT8 377 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 NOD1Q9Y239 953 aa3.91□□□□□ -1.78
XRN1-210ENST00000472697 ERFEQ4G0M1 354 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 PNMA1Q8ND90 353 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 NUDT12Q9BQG2 462 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 COPRSQ9NQ92 184 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 RAB6BQ9NRW1 208 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 HCSTQ9UBK5 93 aa3.9□□□□□ -1.78
XRN1-210ENST00000472697 TNFRSF10BO14763 440 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 COPS2P61201 443 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 MCF2L2Q86YR7 1114 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 ARHGAP9Q9BRR9 750 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 VTI1BQ9UEU0 232 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 SERTAD1Q9UHV2 236 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 RABGEF1Q9UJ41 708 aa3.9□□□□□ -1.79
XRN1-210ENST00000472697 CCDC85CA6NKD9 419 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 PARNO95453 639 aaKnown RBP3.89□□□□□ -1.79
XRN1-210ENST00000472697 FAM98CQ17RN3 349 aaKnown RBP3.89□□□□□ -1.79
XRN1-210ENST00000472697 COX20Q5RI15 118 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 SH3BP5LQ7L8J4 393 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 HELQQ8TDG4 1101 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 EVA1BQ9NVM1 165 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 EGFL7Q9UHF1 273 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 USP20Q9Y2K6 914 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 PCDHB11Q9Y5F2 797 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 HRO43593 1189 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 SCNN1DP51172 638 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 AAMPQ13685 434 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 USPL1Q5W0Q7 1092 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 ADGRD1Q6QNK2 874 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 SH3RF1Q7Z6J0 888 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 UNC93B1Q9H1C4 597 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 ZNF358Q9NW07 568 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 MRVI1Q9Y6F6 885 aa3.89□□□□□ -1.79
XRN1-210ENST00000472697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.89□□□□□ -1.79
XRN1-210ENST00000472697 OPLAHO14841 1288 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 SORBS3O60504 671 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 CCNYL3P0C7X3 344 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 MZF1P28698 734 aaPredicted RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 PDE6BP35913 854 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 PDE3BQ13370 1112 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 CCDC24Q8N4L8 307 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 STAG1Q8WVM7 1258 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 TMPRSS4Q9NRS4 437 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 PARP3Q9Y6F1 533 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 PNMA6FA0A0J9YX94 578 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 PTPRNQ16849 979 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 NOL8Q76FK4 1167 aaKnown RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 ZBTB33Q86T24 672 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 ZSCAN29Q8IWY8 852 aaPredicted RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 ETFBKMTQ8IXQ9 262 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 BAP1Q92560 729 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 CC2D2AQ9P2K1 1620 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 ESPNB1AK53 854 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 ACTN4O43707 911 aaKnown RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 ZNF76P36508 570 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 XPCQ01831 940 aaPredicted RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 SF3A1Q15459 793 aaKnown RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 SDE2Q6IQ49 451 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 PDXDC2PQ6P474 469 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 ANKRD13AQ8IZ07 590 aa3.88□□□□□ -1.79
XRN1-210ENST00000472697 FAM126AQ9BYI3 521 aaPredicted RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 QTRT2Q9H974 415 aaKnown RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 SRA1Q9HD15 236 aaKnown RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.88□□□□□ -1.79
XRN1-210ENST00000472697 BICRAQ9NZM4 1560 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 ARID4BQ4LE39 1312 aaPredicted RBP3.87□□□□□ -1.79
XRN1-210ENST00000472697 TLDC2A0PJX2 215 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 JUNDP17535 347 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 ATP2B1P20020 1258 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 EPHA4P54764 986 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 DAB2P98082 770 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 TMC4Q7Z404 712 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 DZIP3Q86Y13 1208 aaKnown RBP3.87□□□□□ -1.79
XRN1-210ENST00000472697 RAVER1Q8IY67 606 aaKnown RBP3.87□□□□□ -1.79
XRN1-210ENST00000472697 RPUSD2Q8IZ73 545 aaKnown RBP3.87□□□□□ -1.79
XRN1-210ENST00000472697 TRIM56Q9BRZ2 755 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms