RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 NBPF10Q6P3W6 841 aaKnown RBP7.87□□□□□ -1.15
COMMD3-211ENST00000472673 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
COMMD3-211ENST00000472673 TRIM50Q86XT4 487 aa7.87□□□□□ -1.15
COMMD3-211ENST00000472673 NBPF15Q8N660 670 aa7.87□□□□□ -1.15
COMMD3-211ENST00000472673 PPP1R12CQ9BZL4 782 aa7.87□□□□□ -1.15
COMMD3-211ENST00000472673 FHDC1Q9C0D6 1143 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-211ENST00000472673 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
COMMD3-211ENST00000472673 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-211ENST00000472673 ITGA6P23229 1130 aa7.86□□□□□ -1.15
COMMD3-211ENST00000472673 GNASQ5JWF2 1037 aa7.86□□□□□ -1.15
COMMD3-211ENST00000472673 CDC14CA4D256 554 aa7.85□□□□□ -1.15
COMMD3-211ENST00000472673 GMPRP36959 345 aa7.85□□□□□ -1.15
COMMD3-211ENST00000472673 PHKA2P46019 1235 aa7.85□□□□□ -1.15
COMMD3-211ENST00000472673 ATP1A2P50993 1020 aa7.85□□□□□ -1.15
COMMD3-211ENST00000472673 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
COMMD3-211ENST00000472673 VSIG8P0DPA2 414 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 LMOD1P29536 600 aaPredicted RBP7.84□□□□□ -1.15
COMMD3-211ENST00000472673 SMTNP53814 917 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 CLDN10P78369 228 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 WDR44Q5JSH3 913 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 VWA5B2Q8N398 1253 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 OGFOD1Q8N543 542 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
COMMD3-211ENST00000472673 TPCN2Q8NHX9 752 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
COMMD3-211ENST00000472673 DNAAF2Q9NVR5 837 aaKnown RBP7.84□□□□□ -1.15
COMMD3-211ENST00000472673 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
COMMD3-211ENST00000472673 BACH1O14867 736 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 CCDC102BQ68D86 513 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 RIPOR1Q6ZS17 1223 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
COMMD3-211ENST00000472673 RHBDD1Q8TEB9 315 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 ZNF358Q9NW07 568 aa7.83□□□□□ -1.16
COMMD3-211ENST00000472673 ZBTB7BO15156 539 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-211ENST00000472673 RASA1P20936 1047 aa7.82□□□□□ -1.16
COMMD3-211ENST00000472673 SV2AQ7L0J3 742 aa7.82□□□□□ -1.16
COMMD3-211ENST00000472673 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
COMMD3-211ENST00000472673 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
COMMD3-211ENST00000472673 ZNF594Q96JF6 807 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-211ENST00000472673 SLC4A9Q96Q91 983 aa7.82□□□□□ -1.16
COMMD3-211ENST00000472673 CUEDC1Q9NWM3 386 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-211ENST00000472673 A6NJY4 79 aa7.81□□□□□ -1.16
COMMD3-211ENST00000472673 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
COMMD3-211ENST00000472673 GPR161Q8N6U8 529 aaKnown RBP7.81□□□□□ -1.16
COMMD3-211ENST00000472673 GPAMQ9HCL2 828 aa7.81□□□□□ -1.16
COMMD3-211ENST00000472673 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
COMMD3-211ENST00000472673 PLA2G4AP47712 749 aa7.8□□□□□ -1.16
COMMD3-211ENST00000472673 MTFR1Q15390 333 aa7.8□□□□□ -1.16
COMMD3-211ENST00000472673 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
COMMD3-211ENST00000472673 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
COMMD3-211ENST00000472673 NIFKQ9BYG3 293 aaKnown RBP7.8□□□□□ -1.16
COMMD3-211ENST00000472673 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
COMMD3-211ENST00000472673 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 F11P03951 625 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 RFX1P22670 979 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 KANK4Q5T7N3 995 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-211ENST00000472673 TRIM22Q8IYM9 498 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
COMMD3-211ENST00000472673 ARID3CA6NKF2 412 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 H7C1W4 665 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 DBN1Q16643 649 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-211ENST00000472673 TNS4Q8IZW8 715 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 SIX5Q8N196 739 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 ZNF837Q96EG3 531 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-211ENST00000472673 CABP1Q9NZU7 370 aa7.78□□□□□ -1.16
COMMD3-211ENST00000472673 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-211ENST00000472673 IQSEC3Q9UPP2 1182 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-211ENST00000472673 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
COMMD3-211ENST00000472673 MSX1P28360 303 aa7.77□□□□□ -1.17
COMMD3-211ENST00000472673 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
COMMD3-211ENST00000472673 GMCL1Q96IK5 515 aa7.77□□□□□ -1.17
COMMD3-211ENST00000472673 COL25A1Q9BXS0 654 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-211ENST00000472673 CSB-PGBD3P0DP91 1061 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
COMMD3-211ENST00000472673 EPHA4P54764 986 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 PTK7Q13308 1070 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 TBCELQ5QJ74 424 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 PGBD3Q8N328 593 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
COMMD3-211ENST00000472673 GTPBP3Q969Y2 492 aaKnown RBP7.76□□□□□ -1.17
COMMD3-211ENST00000472673 CNTNAP3BQ96NU0 1288 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 CNTNAP3Q9BZ76 1288 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
COMMD3-211ENST00000472673 RUBCNLQ9H714 662 aa7.76□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L15C9J2P7 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L10C9JJH3 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L13C9JLJ4 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L12C9JPN9 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L11C9JVI0 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L21D6R901 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L18D6R9N7 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L22D6RA61 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L17D6RBQ6 530 aa7.75□□□□□ -1.17
COMMD3-211ENST00000472673 USP17L19D6RCP7 530 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms