RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 MAP2P11137 1827 aaKnown RBP13.95□□□□□ -0.18
SCAMP3-205ENST00000472397 PTCD1O75127 700 aaKnown RBP13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 AEBP1Q8IUX7 1158 aa13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
SCAMP3-205ENST00000472397 DPEP1P16444 411 aa13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 PANK3Q9H999 370 aa13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 ADCY9O60503 1353 aa13.93□□□□□ -0.18
SCAMP3-205ENST00000472397 KIF3CO14782 793 aa13.92□□□□□ -0.18
SCAMP3-205ENST00000472397 HSPA6P17066 643 aa13.92□□□□□ -0.18
SCAMP3-205ENST00000472397 CABP4P57796 275 aa13.92□□□□□ -0.18
SCAMP3-205ENST00000472397 CNGB1Q14028 1251 aaPredicted RBP13.92□□□□□ -0.18
SCAMP3-205ENST00000472397 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
SCAMP3-205ENST00000472397 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
SCAMP3-205ENST00000472397 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SCAMP3-205ENST00000472397 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
SCAMP3-205ENST00000472397 PXDNLA1KZ92 1463 aa13.91□□□□□ -0.18
SCAMP3-205ENST00000472397 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
SCAMP3-205ENST00000472397 RFC4P35249 363 aa13.9□□□□□ -0.18
SCAMP3-205ENST00000472397 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
SCAMP3-205ENST00000472397 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
SCAMP3-205ENST00000472397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCAMP3-205ENST00000472397 GYS1P13807 737 aa13.89□□□□□ -0.19
SCAMP3-205ENST00000472397 HTRA3P83110 453 aa13.89□□□□□ -0.19
SCAMP3-205ENST00000472397 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
SCAMP3-205ENST00000472397 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
SCAMP3-205ENST00000472397 KDRP35968 1356 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 MTHFSP49914 203 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 PARP3Q9Y6F1 533 aa13.88□□□□□ -0.19
SCAMP3-205ENST00000472397 ANKRD26Q9UPS8 1709 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 CHRNA5P30532 468 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 FKBP8Q14318 412 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
SCAMP3-205ENST00000472397 ERVV-2B6SEH9 535 aa13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 RPS6KA4O75676 772 aa13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 DDR1Q08345 913 aa13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
SCAMP3-205ENST00000472397 KCNA3P22001 575 aa13.85□□□□□ -0.19
SCAMP3-205ENST00000472397 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
SCAMP3-205ENST00000472397 C9orf131Q5VYM1 1079 aa13.85□□□□□ -0.19
SCAMP3-205ENST00000472397 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 HMOX1P09601 288 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 TGFB2P61812 414 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 LGR6Q9HBX8 967 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
SCAMP3-205ENST00000472397 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
SCAMP3-205ENST00000472397 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
SCAMP3-205ENST00000472397 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.2
SCAMP3-205ENST00000472397 C4AP0C0L4 1744 aa13.82□□□□□ -0.2
SCAMP3-205ENST00000472397 EIF4G2P78344 907 aaKnown RBP eCLIP13.82□□□□□ -0.22e-10■■■■□ 24.2
SCAMP3-205ENST00000472397 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
SCAMP3-205ENST00000472397 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
SCAMP3-205ENST00000472397 IL13P35225 146 aa13.81□□□□□ -0.2
SCAMP3-205ENST00000472397 RASSF7Q02833 373 aa13.81□□□□□ -0.2
SCAMP3-205ENST00000472397 AMOTQ4VCS5 1084 aa13.81□□□□□ -0.2
SCAMP3-205ENST00000472397 RRAGCQ9HB90 399 aa13.81□□□□□ -0.2
SCAMP3-205ENST00000472397 RNF181Q9P0P0 153 aa13.81□□□□□ -0.2
SCAMP3-205ENST00000472397 DALRD3Q5D0E6 543 aaKnown RBP13.8□□□□□ -0.2
SCAMP3-205ENST00000472397 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
SCAMP3-205ENST00000472397 PIM2Q9P1W9 311 aa13.8□□□□□ -0.2
SCAMP3-205ENST00000472397 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
SCAMP3-205ENST00000472397 C16orf71Q8IYS4 520 aaPredicted RBP13.79□□□□□ -0.2
SCAMP3-205ENST00000472397 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
SCAMP3-205ENST00000472397 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
SCAMP3-205ENST00000472397 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
SCAMP3-205ENST00000472397 KCPQ6ZWJ8 1503 aa13.79□□□□□ -0.2
SCAMP3-205ENST00000472397 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
SCAMP3-205ENST00000472397 TOMM70O94826 608 aa13.78□□□□□ -0.2
SCAMP3-205ENST00000472397 KNSTRNQ9Y448 316 aa13.78□□□□□ -0.2
SCAMP3-205ENST00000472397 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
SCAMP3-205ENST00000472397 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 ZPR1O75312 459 aa13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 APLP1P51693 650 aa13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 TJP1Q07157 1748 aa13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 DNAJC5GQ8N7S2 189 aa13.77□□□□□ -0.21
SCAMP3-205ENST00000472397 TM4SF1P30408 202 aa13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 SLC52A2Q9HAB3 445 aa13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 ZBTB1Q9Y2K1 713 aa13.76□□□□□ -0.21
SCAMP3-205ENST00000472397 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms