RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 ERVV-2B6SEH9 535 aa27.43■■□□□ 1.98
RPUSD3-213ENST00000472381 GOLGB1Q14789 3259 aaKnown RBP27.43■■□□□ 1.98
RPUSD3-213ENST00000472381 ITPK1Q13572 414 aa27.42■■□□□ 1.98
RPUSD3-213ENST00000472381 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
RPUSD3-213ENST00000472381 CD2APQ9Y5K6 639 aa27.42■■□□□ 1.98
RPUSD3-213ENST00000472381 KIF7Q2M1P5 1343 aa27.41■■□□□ 1.98
RPUSD3-213ENST00000472381 GNPATO15228 680 aa27.4■■□□□ 1.98
RPUSD3-213ENST00000472381 SMIM5Q71RC9 77 aa27.4■■□□□ 1.98
RPUSD3-213ENST00000472381 AEBP1Q8IUX7 1158 aa27.4■■□□□ 1.98
RPUSD3-213ENST00000472381 GRIN3BO60391 1043 aa27.39■■□□□ 1.98
RPUSD3-213ENST00000472381 ZNF831Q5JPB2 1677 aa27.38■■□□□ 1.97
RPUSD3-213ENST00000472381 AMER1Q5JTC6 1135 aaPredicted RBP27.38■■□□□ 1.97
RPUSD3-213ENST00000472381 C1orf141Q5JVX7 400 aa27.38■■□□□ 1.97
RPUSD3-213ENST00000472381 KDM6AO15550 1401 aaPredicted RBP27.38■■□□□ 1.97
RPUSD3-213ENST00000472381 KDRP35968 1356 aa27.37■■□□□ 1.97
RPUSD3-213ENST00000472381 CABP4P57796 275 aa27.37■■□□□ 1.97
RPUSD3-213ENST00000472381 SULT6B1Q6IMI4 303 aa27.37■■□□□ 1.97
RPUSD3-213ENST00000472381 YBX3P16989 372 aaKnown RBP eCLIP27.36■■□□□ 1.971e-6■■□□□ 12
RPUSD3-213ENST00000472381 MTHFSP49914 203 aa27.36■■□□□ 1.97
RPUSD3-213ENST00000472381 RBM42Q9BTD8 480 aaKnown RBP27.36■■□□□ 1.97
RPUSD3-213ENST00000472381 IL13P35225 146 aa27.35■■□□□ 1.97
RPUSD3-213ENST00000472381 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
RPUSD3-213ENST00000472381 RTCBQ9Y3I0 505 aaKnown RBP27.32■■□□□ 1.96
RPUSD3-213ENST00000472381 SLC4A9Q96Q91 983 aa27.31■■□□□ 1.96
RPUSD3-213ENST00000472381 TRAPPC3LQ5T215 181 aa27.3■■□□□ 1.96
RPUSD3-213ENST00000472381 SCN11AQ9UI33 1791 aa27.29■■□□□ 1.96
RPUSD3-213ENST00000472381 CNTNAP4Q9C0A0 1308 aa27.28■■□□□ 1.96
RPUSD3-213ENST00000472381 RC3H1Q5TC82 1133 aaKnown RBP27.28■■□□□ 1.96
RPUSD3-213ENST00000472381 NFATC2IPQ8NCF5 419 aa27.27■■□□□ 1.96
RPUSD3-213ENST00000472381 ADRA2BP18089 450 aa27.26■■□□□ 1.95
RPUSD3-213ENST00000472381 CC2D1BQ5T0F9 858 aaKnown RBP27.26■■□□□ 1.95
RPUSD3-213ENST00000472381 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
RPUSD3-213ENST00000472381 PTCD1O75127 700 aaKnown RBP27.25■■□□□ 1.95
RPUSD3-213ENST00000472381 MMP10P09238 476 aa27.25■■□□□ 1.95
RPUSD3-213ENST00000472381 AKAP4Q5JQC9 854 aa27.24■■□□□ 1.95
RPUSD3-213ENST00000472381 NLGN1Q8N2Q7 840 aa27.24■■□□□ 1.95
RPUSD3-213ENST00000472381 MYH14Q7Z406 1995 aaKnown RBP27.23■■□□□ 1.95
RPUSD3-213ENST00000472381 RPS6KA4O75676 772 aa27.23■■□□□ 1.95
RPUSD3-213ENST00000472381 ARHGEF1Q92888 912 aaKnown RBP27.23■■□□□ 1.95
RPUSD3-213ENST00000472381 HMOX1P09601 288 aa27.22■■□□□ 1.95
RPUSD3-213ENST00000472381 RFC4P35249 363 aa27.22■■□□□ 1.95
RPUSD3-213ENST00000472381 DIAPH1O60610 1272 aaKnown RBP27.21■■□□□ 1.95
RPUSD3-213ENST00000472381 C1QTNF8P60827 252 aa27.21■■□□□ 1.95
RPUSD3-213ENST00000472381 C4AP0C0L4 1744 aa27.21■■□□□ 1.95
RPUSD3-213ENST00000472381 CICQ96RK0 1608 aaPredicted RBP27.2■■□□□ 1.95
RPUSD3-213ENST00000472381 GIGYF1O75420 1035 aaPredicted RBP27.2■■□□□ 1.94
RPUSD3-213ENST00000472381 TJP1Q07157 1748 aa27.2■■□□□ 1.94
RPUSD3-213ENST00000472381 WWC3Q9ULE0 1092 aa27.2■■□□□ 1.94
RPUSD3-213ENST00000472381 VIRMAQ69YN4 1812 aaKnown RBP27.2■■□□□ 1.94
RPUSD3-213ENST00000472381 KIF13BQ9NQT8 1826 aa27.19■■□□□ 1.94
RPUSD3-213ENST00000472381 CRKLP46109 303 aaKnown RBP27.18■■□□□ 1.94
RPUSD3-213ENST00000472381 SLC52A2Q9HAB3 445 aa27.18■■□□□ 1.94
RPUSD3-213ENST00000472381 GYS1P13807 737 aa27.17■■□□□ 1.94
RPUSD3-213ENST00000472381 NPC1L1Q9UHC9 1359 aa27.17■■□□□ 1.94
RPUSD3-213ENST00000472381 LGR6Q9HBX8 967 aa27.16■■□□□ 1.94
RPUSD3-213ENST00000472381 MRC1P22897 1456 aa27.16■■□□□ 1.94
RPUSD3-213ENST00000472381 CNGB1Q14028 1251 aaPredicted RBP27.15■■□□□ 1.94
RPUSD3-213ENST00000472381 ATP10DQ9P241 1426 aa27.15■■□□□ 1.94
RPUSD3-213ENST00000472381 PXDNLA1KZ92 1463 aa27.14■■□□□ 1.94
RPUSD3-213ENST00000472381 RNMTO43148 476 aaKnown RBP27.14■■□□□ 1.94
RPUSD3-213ENST00000472381 CCDC87Q9NVE4 849 aa27.14■■□□□ 1.94
RPUSD3-213ENST00000472381 PARP3Q9Y6F1 533 aa27.14■■□□□ 1.94
RPUSD3-213ENST00000472381 C10orf71Q711Q0 1435 aa27.14■■□□□ 1.93
RPUSD3-213ENST00000472381 KIAA1551Q9HCM1 1747 aa27.13■■□□□ 1.93
RPUSD3-213ENST00000472381 N4BP2Q86UW6 1770 aaPredicted RBP27.13■■□□□ 1.93
RPUSD3-213ENST00000472381 SENP3-EIF4A1A0A087X0R7 540 aa27.13■■□□□ 1.93
RPUSD3-213ENST00000472381 TGFB2P61812 414 aa27.13■■□□□ 1.93
RPUSD3-213ENST00000472381 MTHFSDQ2M296 383 aaKnown RBP27.13■■□□□ 1.93
RPUSD3-213ENST00000472381 ADAMTS7Q9UKP4 1686 aa27.11■■□□□ 1.93
RPUSD3-213ENST00000472381 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
RPUSD3-213ENST00000472381 DNAJC10Q8IXB1 793 aa27.1■■□□□ 1.93
RPUSD3-213ENST00000472381 USP42Q9H9J4 1324 aaKnown RBP27.1■■□□□ 1.93
RPUSD3-213ENST00000472381 ADCY9O60503 1353 aa27.09■■□□□ 1.93
RPUSD3-213ENST00000472381 U2SURPO15042 1029 aaKnown RBP27.09■■□□□ 1.93
RPUSD3-213ENST00000472381 SLC39A6Q13433 755 aa27.09■■□□□ 1.93
RPUSD3-213ENST00000472381 INTS5Q6P9B9 1019 aaKnown RBP27.09■■□□□ 1.93
RPUSD3-213ENST00000472381 SRP68Q9UHB9 627 aaKnown RBP27.09■■□□□ 1.93
RPUSD3-213ENST00000472381 A0A0G2JLW4 131 aa27.07■■□□□ 1.92
RPUSD3-213ENST00000472381 GPBP1L1Q9HC44 474 aaPredicted RBP27.07■■□□□ 1.92
RPUSD3-213ENST00000472381 KCPQ6ZWJ8 1503 aa27.06■■□□□ 1.92
RPUSD3-213ENST00000472381 BCS1LQ9Y276 419 aa27.06■■□□□ 1.92
RPUSD3-213ENST00000472381 FKBP8Q14318 412 aa27.05■■□□□ 1.92
RPUSD3-213ENST00000472381 ZPR1O75312 459 aa27.04■■□□□ 1.92
RPUSD3-213ENST00000472381 CYP19A1P11511 503 aaPredicted RBP27.04■■□□□ 1.92
RPUSD3-213ENST00000472381 DPEP1P16444 411 aa27.04■■□□□ 1.92
RPUSD3-213ENST00000472381 BRCA1P38398 1863 aaKnown RBP27.03■■□□□ 1.92
RPUSD3-213ENST00000472381 SOS1Q07889 1333 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-213ENST00000472381 UBR2Q8IWV8 1755 aa27.03■■□□□ 1.92
RPUSD3-213ENST00000472381 GAS2L2Q8NHY3 880 aa27.03■■□□□ 1.92
RPUSD3-213ENST00000472381 ZNF526Q8TF50 670 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-213ENST00000472381 VSIG10Q8N0Z9 540 aa27.02■■□□□ 1.92
RPUSD3-213ENST00000472381 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
RPUSD3-213ENST00000472381 DDR1Q08345 913 aa27.01■■□□□ 1.91
RPUSD3-213ENST00000472381 TTC5Q8N0Z6 440 aa27.01■■□□□ 1.91
RPUSD3-213ENST00000472381 GNAT3A8MTJ3 354 aa27■■□□□ 1.91
RPUSD3-213ENST00000472381 FCHSD2O94868 740 aa27■■□□□ 1.91
RPUSD3-213ENST00000472381 USPL1Q5W0Q7 1092 aa27■■□□□ 1.91
RPUSD3-213ENST00000472381 COL15A1P39059 1388 aa26.99■■□□□ 1.91
RPUSD3-213ENST00000472381 TEFQ10587 303 aa26.99■■□□□ 1.91
RPUSD3-213ENST00000472381 ZBTB1Q9Y2K1 713 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms