RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 SERTAD1Q9UHV2 236 aa9.61□□□□□ -0.87
CLTC-204ENST00000472129 CLDN10P78369 228 aa9.6□□□□□ -0.87
CLTC-204ENST00000472129 MKRN1Q9UHC7 482 aaKnown RBP9.6□□□□□ -0.87
CLTC-204ENST00000472129 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
CLTC-204ENST00000472129 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
CLTC-204ENST00000472129 PSME1Q06323 249 aa9.59□□□□□ -0.87
CLTC-204ENST00000472129 ZSCAN10Q96SZ4 725 aaPredicted RBP9.59□□□□□ -0.87
CLTC-204ENST00000472129 TLR1Q15399 786 aa9.58□□□□□ -0.88
CLTC-204ENST00000472129 NBPF10Q6P3W6 841 aaKnown RBP9.58□□□□□ -0.88
CLTC-204ENST00000472129 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
CLTC-204ENST00000472129 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
CLTC-204ENST00000472129 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLTC-204ENST00000472129 ARID3CA6NKF2 412 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 SPATA31C2B4DYI2 1134 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
CLTC-204ENST00000472129 PHKA2P46019 1235 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 KRT76Q01546 638 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
CLTC-204ENST00000472129 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
CLTC-204ENST00000472129 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
CLTC-204ENST00000472129 CFAP70Q5T0N1 1121 aa9.56□□□□□ -0.88
CLTC-204ENST00000472129 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
CLTC-204ENST00000472129 ITGA6P23229 1130 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 GSK3AP49840 483 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 SMTNP53814 917 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 KANK4Q5T7N3 995 aaPredicted RBP9.55□□□□□ -0.88
CLTC-204ENST00000472129 TAS1R3Q7RTX0 852 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
CLTC-204ENST00000472129 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 DNAAF2Q9NVR5 837 aaKnown RBP9.55□□□□□ -0.88
CLTC-204ENST00000472129 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
CLTC-204ENST00000472129 CUEDC1Q9NWM3 386 aaPredicted RBP9.55□□□□□ -0.88
CLTC-204ENST00000472129 LOC100996750A0A140TA64 210 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 C4orf17Q53FE4 359 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 CCDC102BQ68D86 513 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
CLTC-204ENST00000472129 KRTAP4-6Q9BYQ5 205 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
CLTC-204ENST00000472129 RASA1P20936 1047 aa9.53□□□□□ -0.88
CLTC-204ENST00000472129 RFX1P22670 979 aa9.53□□□□□ -0.88
CLTC-204ENST00000472129 GAS2L1Q99501 681 aaPredicted RBP9.53□□□□□ -0.88
CLTC-204ENST00000472129 TIMMDC1Q9NPL8 285 aa9.53□□□□□ -0.88
CLTC-204ENST00000472129 A6NJY4 79 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 DKK1O94907 266 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
CLTC-204ENST00000472129 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 WDR44Q5JSH3 913 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 VWA5B2Q8N398 1253 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 LARGE2Q8N3Y3 721 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 DYRK1BQ9Y463 629 aa9.52□□□□□ -0.89
CLTC-204ENST00000472129 CDC14CA4D256 554 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
CLTC-204ENST00000472129 MTFR1Q15390 333 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 CNTNAP3BQ96NU0 1288 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 CNTNAP3Q9BZ76 1288 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 VRTNQ9H8Y1 702 aa9.51□□□□□ -0.89
CLTC-204ENST00000472129 IQSEC3Q9UPP2 1182 aaPredicted RBP9.51□□□□□ -0.89
CLTC-204ENST00000472129 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
CLTC-204ENST00000472129 BACH1O14867 736 aa9.5□□□□□ -0.89
CLTC-204ENST00000472129 SIX5Q8N196 739 aa9.5□□□□□ -0.89
CLTC-204ENST00000472129 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
CLTC-204ENST00000472129 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 EPHA4P54764 986 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 DBN1Q16643 649 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 TBCELQ5QJ74 424 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 ZNF295-AS1Q8N0V1 137 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
CLTC-204ENST00000472129 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
CLTC-204ENST00000472129 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
CLTC-204ENST00000472129 PTK7Q13308 1070 aa9.48□□□□□ -0.89
CLTC-204ENST00000472129 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
CLTC-204ENST00000472129 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
CLTC-204ENST00000472129 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
CLTC-204ENST00000472129 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
CLTC-204ENST00000472129 GPAMQ9HCL2 828 aa9.48□□□□□ -0.89
CLTC-204ENST00000472129 F11P03951 625 aa9.47□□□□□ -0.89
CLTC-204ENST00000472129 FOXK2Q01167 660 aa9.47□□□□□ -0.89
CLTC-204ENST00000472129 RNFT1Q5M7Z0 435 aa9.47□□□□□ -0.89
CLTC-204ENST00000472129 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
CLTC-204ENST00000472129 NIFKQ9BYG3 293 aaKnown RBP9.47□□□□□ -0.89
CLTC-204ENST00000472129 PARP3Q9Y6F1 533 aa9.47□□□□□ -0.89
CLTC-204ENST00000472129 A0A1B0GTH6 734 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L21D6R901 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
CLTC-204ENST00000472129 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms