RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 NBPF15Q8N660 670 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 BTBD6Q96KE9 485 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 GRIP2Q9C0E4 1043 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 ZBTB7CA1YPR0 619 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 EPXP11678 715 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 AMPD1P23109 780 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 PTK2Q05397 1052 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 LBRQ14739 615 aaKnown RBP5.39□□□□□ -1.55
SCN3A-207ENST00000471697 PPP2R2DQ66LE6 453 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 BARGINQ6ZT62 677 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 SEPT12Q8IYM1 358 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 ADAM32Q8TC27 787 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 LIMD1Q9UGP4 676 aa5.39□□□□□ -1.55
SCN3A-207ENST00000471697 ATP5J2-PTCD1G3V325 749 aa5.38□□□□□ -1.55
SCN3A-207ENST00000471697 UBAP2LQ14157 1087 aaKnown RBP5.38□□□□□ -1.55
SCN3A-207ENST00000471697 A0A1W2PRU2 124 aa5.37□□□□□ -1.55
SCN3A-207ENST00000471697 DYRK3O43781 588 aa5.37□□□□□ -1.55
SCN3A-207ENST00000471697 EIF5BO60841 1220 aaKnown RBP5.37□□□□□ -1.55
SCN3A-207ENST00000471697 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
SCN3A-207ENST00000471697 RTL5Q5HYW3 569 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-207ENST00000471697 TIMMDC1Q9NPL8 285 aa5.37□□□□□ -1.55
SCN3A-207ENST00000471697 GGA1Q9UJY5 639 aa5.37□□□□□ -1.55
SCN3A-207ENST00000471697 C2CD2LO14523 706 aa5.36□□□□□ -1.55
SCN3A-207ENST00000471697 SPATA31C1P0DKV0 1188 aa5.36□□□□□ -1.55
SCN3A-207ENST00000471697 LRP8Q14114 963 aa5.36□□□□□ -1.55
SCN3A-207ENST00000471697 MYSM1Q5VVJ2 828 aa5.36□□□□□ -1.55
SCN3A-207ENST00000471697 ATXN7L1Q9ULK2 861 aaPredicted RBP5.36□□□□□ -1.55
SCN3A-207ENST00000471697 MEN1O00255 615 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 WASLO00401 505 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-207ENST00000471697 ARAFP10398 606 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 RAB15P59190 212 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 SLC27A3Q5K4L6 730 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 TAS1R3Q7RTX0 852 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 CYLDQ9NQC7 956 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 TPSG1Q9NRR2 321 aa5.35□□□□□ -1.55
SCN3A-207ENST00000471697 BMP4P12644 408 aa5.34□□□□□ -1.55
SCN3A-207ENST00000471697 PDIA4P13667 645 aaKnown RBP5.34□□□□□ -1.55
SCN3A-207ENST00000471697 CLN3Q13286 438 aa5.34□□□□□ -1.55
SCN3A-207ENST00000471697 RNF135Q8IUD6 432 aa5.34□□□□□ -1.55
SCN3A-207ENST00000471697 PARP9Q8IXQ6 854 aa5.34□□□□□ -1.55
SCN3A-207ENST00000471697 NDFIP2Q9NV92 336 aa5.34□□□□□ -1.55
SCN3A-207ENST00000471697 CTDSPL2Q05D32 466 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 PRSS36Q5K4E3 855 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 CCDC125Q86Z20 511 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 NLRP3Q96P20 1036 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 C1orf115Q9H7X2 142 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 SLC24A3Q9HC58 644 aa5.33□□□□□ -1.56
SCN3A-207ENST00000471697 A0A1B0GTH6 734 aa5.32□□□□□ -1.56
SCN3A-207ENST00000471697 CHSY3Q70JA7 882 aa5.32□□□□□ -1.56
SCN3A-207ENST00000471697 DZIP3Q86Y13 1208 aaKnown RBP5.32□□□□□ -1.56
SCN3A-207ENST00000471697 TRIM11Q96F44 468 aa5.32□□□□□ -1.56
SCN3A-207ENST00000471697 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-207ENST00000471697 FGFR3P22607 806 aa5.31□□□□□ -1.56
SCN3A-207ENST00000471697 ERVK-9P63128 1117 aa5.31□□□□□ -1.56
SCN3A-207ENST00000471697 ARID3AQ99856 593 aa5.31□□□□□ -1.56
SCN3A-207ENST00000471697 TRIM66O15016 1216 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 CTBSQ01459 385 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 NR6A1Q15406 480 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 LRRN4Q8WUT4 740 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 PLVAPQ9BX97 442 aa5.3□□□□□ -1.56
SCN3A-207ENST00000471697 COBLO75128 1261 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 H2AFB1P0C5Y9 115 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 H2AFB2P0C5Z0 115 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 YBX3P16989 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCN3A-207ENST00000471697 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 ABHD17AQ96GS6 310 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 AK7Q96M32 723 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 GPAMQ9HCL2 828 aa5.29□□□□□ -1.56
SCN3A-207ENST00000471697 AVENQ9NQS1 362 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-207ENST00000471697 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
SCN3A-207ENST00000471697 NEURL1BA8MQ27 555 aa5.28□□□□□ -1.56
SCN3A-207ENST00000471697 BNIP3LO60238 219 aa5.28□□□□□ -1.56
SCN3A-207ENST00000471697 HMGB1P09429 215 aaKnown RBP5.28□□□□□ -1.56
SCN3A-207ENST00000471697 CYP2U1Q7Z449 544 aa5.28□□□□□ -1.56
SCN3A-207ENST00000471697 FMNL2Q96PY5 1086 aa5.28□□□□□ -1.56
SCN3A-207ENST00000471697 IGSF3O75054 1194 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 CSB-PGBD3P0DP91 1061 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 ADH6P28332 368 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 TXKP42681 527 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 CLK2P49760 499 aaKnown RBP5.27□□□□□ -1.57
SCN3A-207ENST00000471697 EFHC2Q5JST6 749 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 PGBD3Q8N328 593 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 PNMA1Q8ND90 353 aa5.27□□□□□ -1.57
SCN3A-207ENST00000471697 FAM182BQ5T319 152 aa5.26□□□□□ -1.57
SCN3A-207ENST00000471697 CRISPLD1Q9H336 500 aa5.26□□□□□ -1.57
SCN3A-207ENST00000471697 KLF15Q9UIH9 416 aa5.26□□□□□ -1.57
SCN3A-207ENST00000471697 COL17A1Q9UMD9 1497 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-207ENST00000471697 PAX4O43316 350 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 TRAK2O60296 914 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 APBA3O96018 575 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 PDE4DQ08499 809 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 PRRT3Q5FWE3 981 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 FCHSD1Q86WN1 690 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 ESYT1Q9BSJ8 1104 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 HRH3Q9Y5N1 445 aa5.25□□□□□ -1.57
SCN3A-207ENST00000471697 MSX1P28360 303 aa5.24□□□□□ -1.57
SCN3A-207ENST00000471697 FIGNL1Q6PIW4 674 aa5.24□□□□□ -1.57
SCN3A-207ENST00000471697 NACC1Q96RE7 527 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms