RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 ZNF530Q6P9A1 599 aaPredicted RBP13.39□□□□□ -0.27
RPRD1B-204ENST00000471511 KDRP35968 1356 aa13.39□□□□□ -0.27
RPRD1B-204ENST00000471511 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
RPRD1B-204ENST00000471511 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
RPRD1B-204ENST00000471511 MTHFSP49914 203 aa13.38□□□□□ -0.27
RPRD1B-204ENST00000471511 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
RPRD1B-204ENST00000471511 ERVV-2B6SEH9 535 aa13.37□□□□□ -0.27
RPRD1B-204ENST00000471511 GPR162Q16538 588 aa13.37□□□□□ -0.27
RPRD1B-204ENST00000471511 CC2D1BQ5T0F9 858 aaKnown RBP13.37□□□□□ -0.27
RPRD1B-204ENST00000471511 AK7Q96M32 723 aa13.37□□□□□ -0.27
RPRD1B-204ENST00000471511 UBR3Q6ZT12 1888 aa13.37□□□□□ -0.27
RPRD1B-204ENST00000471511 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
RPRD1B-204ENST00000471511 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
RPRD1B-204ENST00000471511 DCAF5Q96JK2 942 aa13.36□□□□□ -0.27
RPRD1B-204ENST00000471511 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
RPRD1B-204ENST00000471511 GNPATO15228 680 aa13.35□□□□□ -0.27
RPRD1B-204ENST00000471511 HMOX1P09601 288 aa13.35□□□□□ -0.27
RPRD1B-204ENST00000471511 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
RPRD1B-204ENST00000471511 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
RPRD1B-204ENST00000471511 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
RPRD1B-204ENST00000471511 SSFA2P28290 1259 aa13.34□□□□□ -0.27
RPRD1B-204ENST00000471511 AMOTQ4VCS5 1084 aa13.34□□□□□ -0.27
RPRD1B-204ENST00000471511 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
RPRD1B-204ENST00000471511 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.27
RPRD1B-204ENST00000471511 CABP4P57796 275 aa13.33□□□□□ -0.28
RPRD1B-204ENST00000471511 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.28
RPRD1B-204ENST00000471511 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
RPRD1B-204ENST00000471511 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
RPRD1B-204ENST00000471511 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
RPRD1B-204ENST00000471511 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
RPRD1B-204ENST00000471511 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
RPRD1B-204ENST00000471511 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
RPRD1B-204ENST00000471511 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
RPRD1B-204ENST00000471511 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-204ENST00000471511 MYH14Q7Z406 1995 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-204ENST00000471511 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 DIAPH1O60610 1272 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 MMP10P09238 476 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 GYS1P13807 737 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
RPRD1B-204ENST00000471511 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
RPRD1B-204ENST00000471511 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-204ENST00000471511 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
RPRD1B-204ENST00000471511 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
RPRD1B-204ENST00000471511 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-204ENST00000471511 CHD4Q14839 1912 aa13.27□□□□□ -0.28
RPRD1B-204ENST00000471511 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
RPRD1B-204ENST00000471511 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.29
RPRD1B-204ENST00000471511 TJP1Q07157 1748 aa13.27□□□□□ -0.29
RPRD1B-204ENST00000471511 FKBP8Q14318 412 aa13.26□□□□□ -0.29
RPRD1B-204ENST00000471511 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
RPRD1B-204ENST00000471511 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
RPRD1B-204ENST00000471511 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
RPRD1B-204ENST00000471511 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
RPRD1B-204ENST00000471511 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
RPRD1B-204ENST00000471511 DDR1Q08345 913 aa13.25□□□□□ -0.29
RPRD1B-204ENST00000471511 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 PXDNLA1KZ92 1463 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 MRC1P22897 1456 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 KCNA3P22001 575 aa13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
RPRD1B-204ENST00000471511 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
RPRD1B-204ENST00000471511 RFC4P35249 363 aa13.23□□□□□ -0.29
RPRD1B-204ENST00000471511 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
RPRD1B-204ENST00000471511 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
RPRD1B-204ENST00000471511 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 KCNQ3O43525 872 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 DPEP1P16444 411 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
RPRD1B-204ENST00000471511 SOS1Q07889 1333 aaPredicted RBP13.21□□□□□ -0.29
RPRD1B-204ENST00000471511 PPP2R1AP30153 589 aa13.21□□□□□ -0.29
RPRD1B-204ENST00000471511 TM4SF1P30408 202 aa13.21□□□□□ -0.29
RPRD1B-204ENST00000471511 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
RPRD1B-204ENST00000471511 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
RPRD1B-204ENST00000471511 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
RPRD1B-204ENST00000471511 ADCY9O60503 1353 aa13.2□□□□□ -0.3
RPRD1B-204ENST00000471511 USPL1Q5W0Q7 1092 aa13.2□□□□□ -0.3
RPRD1B-204ENST00000471511 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
RPRD1B-204ENST00000471511 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
RPRD1B-204ENST00000471511 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
RPRD1B-204ENST00000471511 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-204ENST00000471511 CHRNA5P30532 468 aa13.18□□□□□ -0.3
RPRD1B-204ENST00000471511 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
RPRD1B-204ENST00000471511 TGFB2P61812 414 aa13.18□□□□□ -0.3
RPRD1B-204ENST00000471511 PARP3Q9Y6F1 533 aa13.18□□□□□ -0.3
RPRD1B-204ENST00000471511 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
RPRD1B-204ENST00000471511 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
RPRD1B-204ENST00000471511 NFIXQ14938 502 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms