RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 AK7Q96M32 723 aa31.62■■■□□ 2.65
RNF220-208ENST00000471494 ATG3Q9NT62 314 aa31.62■■■□□ 2.65
RNF220-208ENST00000471494 CABP4P57796 275 aa31.6■■■□□ 2.65
RNF220-208ENST00000471494 FLAD1Q8NFF5 587 aa31.6■■■□□ 2.65
RNF220-208ENST00000471494 ZNF831Q5JPB2 1677 aa31.6■■■□□ 2.65
RNF220-208ENST00000471494 SYT17Q9BSW7 474 aa31.59■■■□□ 2.65
RNF220-208ENST00000471494 ATP6V1AP38606 617 aa31.58■■■□□ 2.65
RNF220-208ENST00000471494 MAP3K5Q99683 1374 aa31.56■■■□□ 2.64
RNF220-208ENST00000471494 LINC00116Q8NCU8 138 aa31.56■■■□□ 2.64
RNF220-208ENST00000471494 ITPK1Q13572 414 aa31.55■■■□□ 2.64
RNF220-208ENST00000471494 AKAP4Q5JQC9 854 aa31.55■■■□□ 2.64
RNF220-208ENST00000471494 COL5A3P25940 1745 aaPredicted RBP31.54■■■□□ 2.64
RNF220-208ENST00000471494 U2SURPO15042 1029 aaKnown RBP31.53■■■□□ 2.64
RNF220-208ENST00000471494 RBM42Q9BTD8 480 aaKnown RBP31.53■■■□□ 2.64
RNF220-208ENST00000471494 PHF14O94880 888 aa31.52■■■□□ 2.64
RNF220-208ENST00000471494 MSL1Q68DK7 614 aa31.52■■■□□ 2.64
RNF220-208ENST00000471494 KLHL34Q8N239 644 aa31.52■■■□□ 2.64
RNF220-208ENST00000471494 CFAP53Q96M91 514 aa31.52■■■□□ 2.64
RNF220-208ENST00000471494 SSFA2P28290 1259 aa31.5■■■□□ 2.63
RNF220-208ENST00000471494 NFATC2IPQ8NCF5 419 aa31.5■■■□□ 2.63
RNF220-208ENST00000471494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.49■■■□□ 2.63
RNF220-208ENST00000471494 GNPATO15228 680 aa31.49■■■□□ 2.63
RNF220-208ENST00000471494 AMIGO3Q86WK7 504 aa31.49■■■□□ 2.63
RNF220-208ENST00000471494 ADAMTS7Q9UKP4 1686 aa31.48■■■□□ 2.63
RNF220-208ENST00000471494 MRC1P22897 1456 aa31.47■■■□□ 2.63
RNF220-208ENST00000471494 MTHFSDQ2M296 383 aaKnown RBP31.46■■■□□ 2.63
RNF220-208ENST00000471494 SMIM5Q71RC9 77 aa31.46■■■□□ 2.63
RNF220-208ENST00000471494 SLC4A9Q96Q91 983 aa31.46■■■□□ 2.63
RNF220-208ENST00000471494 PTCD1O75127 700 aaKnown RBP31.44■■■□□ 2.62
RNF220-208ENST00000471494 PPP2R1AP30153 589 aa31.44■■■□□ 2.62
RNF220-208ENST00000471494 SLC52A2Q9HAB3 445 aa31.44■■■□□ 2.62
RNF220-208ENST00000471494 CICQ96RK0 1608 aaPredicted RBP31.44■■■□□ 2.62
RNF220-208ENST00000471494 TJP1Q07157 1748 aa31.44■■■□□ 2.62
RNF220-208ENST00000471494 RNMTO43148 476 aaKnown RBP31.43■■■□□ 2.62
RNF220-208ENST00000471494 LGR6Q9HBX8 967 aa31.43■■■□□ 2.62
RNF220-208ENST00000471494 MYH14Q7Z406 1995 aaKnown RBP31.43■■■□□ 2.62
RNF220-208ENST00000471494 CNTNAP4Q9C0A0 1308 aa31.41■■■□□ 2.62
RNF220-208ENST00000471494 NUDCQ9Y266 331 aa31.4■■■□□ 2.62
RNF220-208ENST00000471494 RTCBQ9Y3I0 505 aaKnown RBP31.4■■■□□ 2.62
RNF220-208ENST00000471494 YY1P25490 414 aa31.39■■■□□ 2.62
RNF220-208ENST00000471494 RC3H1Q5TC82 1133 aaKnown RBP31.39■■■□□ 2.62
RNF220-208ENST00000471494 CHD4Q14839 1912 aa31.38■■■□□ 2.61
RNF220-208ENST00000471494 GAS2L2Q8NHY3 880 aa31.38■■■□□ 2.61
RNF220-208ENST00000471494 C4AP0C0L4 1744 aa31.36■■■□□ 2.61
RNF220-208ENST00000471494 NLGN2Q8NFZ4 835 aa31.36■■■□□ 2.61
RNF220-208ENST00000471494 TRAPPC3LQ5T215 181 aa31.35■■■□□ 2.61
RNF220-208ENST00000471494 ADRA2BP18089 450 aa31.34■■■□□ 2.61
RNF220-208ENST00000471494 PRKAR2BP31323 418 aa31.34■■■□□ 2.61
RNF220-208ENST00000471494 UBR2Q8IWV8 1755 aa31.33■■■□□ 2.61
RNF220-208ENST00000471494 U2AF1L5P0DN76 240 aaPredicted RBP31.33■■■□□ 2.61
RNF220-208ENST00000471494 U2AF1Q01081 240 aaKnown RBP eCLIP31.33■■■□□ 2.61
RNF220-208ENST00000471494 GPR162Q16538 588 aa31.33■■■□□ 2.61
RNF220-208ENST00000471494 RSPH6AQ9H0K4 717 aa31.33■■■□□ 2.61
RNF220-208ENST00000471494 SIPA1L3O60292 1781 aaPredicted RBP31.33■■■□□ 2.61
RNF220-208ENST00000471494 GNAT3A8MTJ3 354 aa31.32■■■□□ 2.6
RNF220-208ENST00000471494 RPS6KA4O75676 772 aa31.32■■■□□ 2.6
RNF220-208ENST00000471494 KCPQ6ZWJ8 1503 aa31.32■■■□□ 2.6
RNF220-208ENST00000471494 CRKLP46109 303 aaKnown RBP31.31■■■□□ 2.6
RNF220-208ENST00000471494 SLC39A6Q13433 755 aa31.31■■■□□ 2.6
RNF220-208ENST00000471494 PELP1Q8IZL8 1130 aaKnown RBP31.31■■■□□ 2.6
RNF220-208ENST00000471494 CD2APQ9Y5K6 639 aa31.3■■■□□ 2.6
RNF220-208ENST00000471494 ARHGEF1Q92888 912 aaKnown RBP31.29■■■□□ 2.6
RNF220-208ENST00000471494 RFC4P35249 363 aa31.28■■■□□ 2.6
RNF220-208ENST00000471494 TEFQ10587 303 aa31.28■■■□□ 2.6
RNF220-208ENST00000471494 PHACTR3Q96KR7 559 aa31.28■■■□□ 2.6
RNF220-208ENST00000471494 DNAJC10Q8IXB1 793 aa31.26■■■□□ 2.59
RNF220-208ENST00000471494 IL17REQ8NFR9 667 aa31.26■■■□□ 2.59
RNF220-208ENST00000471494 FCHSD2O94868 740 aa31.25■■■□□ 2.59
RNF220-208ENST00000471494 TTC5Q8N0Z6 440 aa31.25■■■□□ 2.59
RNF220-208ENST00000471494 UTRNP46939 3433 aa31.24■■■□□ 2.59
RNF220-208ENST00000471494 MMP10P09238 476 aa31.24■■■□□ 2.59
RNF220-208ENST00000471494 NLGN1Q8N2Q7 840 aa31.24■■■□□ 2.59
RNF220-208ENST00000471494 CCDC87Q9NVE4 849 aa31.23■■■□□ 2.59
RNF220-208ENST00000471494 GYS1P13807 737 aa31.21■■■□□ 2.59
RNF220-208ENST00000471494 INTS5Q6P9B9 1019 aaKnown RBP31.21■■■□□ 2.59
RNF220-208ENST00000471494 KIF13BQ9NQT8 1826 aa31.21■■■□□ 2.59
RNF220-208ENST00000471494 CEMIPQ8WUJ3 1361 aa31.2■■■□□ 2.59
RNF220-208ENST00000471494 VSIG10Q8N0Z9 540 aa31.2■■■□□ 2.59
RNF220-208ENST00000471494 CYP19A1P11511 503 aaPredicted RBP31.19■■■□□ 2.58
RNF220-208ENST00000471494 GOLGB1Q14789 3259 aaKnown RBP31.18■■■□□ 2.58
RNF220-208ENST00000471494 DDX10Q13206 875 aaKnown RBP31.17■■■□□ 2.58
RNF220-208ENST00000471494 ZNF790Q6PG37 636 aa31.17■■■□□ 2.58
RNF220-208ENST00000471494 RTF1Q92541 710 aaKnown RBP31.17■■■□□ 2.58
RNF220-208ENST00000471494 USP42Q9H9J4 1324 aaKnown RBP31.17■■■□□ 2.58
RNF220-208ENST00000471494 DLG5Q8TDM6 1919 aa31.16■■■□□ 2.58
RNF220-208ENST00000471494 YBX3P16989 372 aaKnown RBP eCLIP31.16■■■□□ 2.58
RNF220-208ENST00000471494 SRP68Q9UHB9 627 aaKnown RBP31.16■■■□□ 2.58
RNF220-208ENST00000471494 SOS1Q07889 1333 aaPredicted RBP31.16■■■□□ 2.58
RNF220-208ENST00000471494 GRIN3BO60391 1043 aa31.15■■■□□ 2.58
RNF220-208ENST00000471494 NEFMP07197 916 aa31.15■■■□□ 2.58
RNF220-208ENST00000471494 ZNF496Q96IT1 587 aaPredicted RBP31.15■■■□□ 2.58
RNF220-208ENST00000471494 RALBP1Q15311 655 aa31.14■■■□□ 2.58
RNF220-208ENST00000471494 ZBTB1Q9Y2K1 713 aa31.13■■■□□ 2.57
RNF220-208ENST00000471494 PARP3Q9Y6F1 533 aa31.13■■■□□ 2.57
RNF220-208ENST00000471494 HEG1Q9ULI3 1381 aa31.13■■■□□ 2.57
RNF220-208ENST00000471494 STARD3NLO95772 234 aa31.12■■■□□ 2.57
RNF220-208ENST00000471494 COL15A1P39059 1388 aa31.12■■■□□ 2.57
RNF220-208ENST00000471494 C10orf71Q711Q0 1435 aa31.12■■■□□ 2.57
RNF220-208ENST00000471494 N4BP2Q86UW6 1770 aaPredicted RBP31.12■■■□□ 2.57
RNF220-208ENST00000471494 BTBD11A6QL63 1104 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms