RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TFIP11Q9UBB9 837 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-206ENST00000471167 LZTS3O60299 673 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 DKK1O94907 266 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 GTF2IP78347 998 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 CLDN10P78369 228 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 DBN1Q16643 649 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 C4orf17Q53FE4 359 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 SLC4A9Q96Q91 983 aa10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 ZSCAN10Q96SZ4 725 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 ZNF777Q9ULD5 760 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-206ENST00000471167 PHKA2P46019 1235 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 IQSEC3Q9UPP2 1182 aaPredicted RBP10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 NOD1Q9Y239 953 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 DYRK1BQ9Y463 629 aa10.81□□□□□ -0.68
PRPF40A-206ENST00000471167 TAS1R3Q7RTX0 852 aa10.8□□□□□ -0.68
PRPF40A-206ENST00000471167 MAFBQ9Y5Q3 323 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-206ENST00000471167 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
PRPF40A-206ENST00000471167 PALM3A6NDB9 673 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-206ENST00000471167 SMTNP53814 917 aa10.79□□□□□ -0.68
PRPF40A-206ENST00000471167 TLR1Q15399 786 aa10.79□□□□□ -0.68
PRPF40A-206ENST00000471167 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF40A-206ENST00000471167 EPHA4P54764 986 aa10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 MTFR1Q15390 333 aa10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 PPP1R12CQ9BZL4 782 aa10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-206ENST00000471167 GAS6Q14393 721 aa10.77□□□□□ -0.69
PRPF40A-206ENST00000471167 CALR3Q96L12 384 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-206ENST00000471167 COL25A1Q9BXS0 654 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-206ENST00000471167 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.69
PRPF40A-206ENST00000471167 CDC14CA4D256 554 aa10.76□□□□□ -0.69
PRPF40A-206ENST00000471167 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-206ENST00000471167 TRIM22Q8IYM9 498 aa10.76□□□□□ -0.69
PRPF40A-206ENST00000471167 GAS2L1Q99501 681 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-206ENST00000471167 UBAP2LQ14157 1087 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-206ENST00000471167 TMEM214Q6NUQ4 689 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-206ENST00000471167 SV2AQ7L0J3 742 aa10.75□□□□□ -0.69
PRPF40A-206ENST00000471167 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
PRPF40A-206ENST00000471167 A6NJY4 79 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 FOXK2Q01167 660 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 OGFOD1Q8N543 542 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 CNTNAP3Q9BZ76 1288 aa10.74□□□□□ -0.69
PRPF40A-206ENST00000471167 CDK2AP1O14519 115 aa10.73□□□□□ -0.69
PRPF40A-206ENST00000471167 F11P03951 625 aa10.73□□□□□ -0.69
PRPF40A-206ENST00000471167 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
PRPF40A-206ENST00000471167 GPR25O00155 361 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 MSX1P28360 303 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 RIPOR1Q6ZS17 1223 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 TNS4Q8IZW8 715 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 TPCN2Q8NHX9 752 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 ZDHHC1Q8WTX9 485 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 GPAMQ9HCL2 828 aa10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-206ENST00000471167 INSM1Q01101 510 aaPredicted RBP10.71□□□□□ -0.69
PRPF40A-206ENST00000471167 GNASQ5JWF2 1037 aa10.71□□□□□ -0.69
PRPF40A-206ENST00000471167 DNAAF2Q9NVR5 837 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-206ENST00000471167 ATP4AP20648 1035 aa10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 CRTC2Q53ET0 693 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 TBCELQ5QJ74 424 aa10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 SIX5Q8N196 739 aa10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 GTPBP3Q969Y2 492 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 KLRG1Q96E93 195 aa10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 HCN2Q9UL51 889 aa10.7□□□□□ -0.7
PRPF40A-206ENST00000471167 A0A1B0GTH6 734 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 PLA2G4AP47712 749 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 PSME1Q06323 249 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 ZSCAN1Q8NBB4 408 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 RUBCNLQ9H714 662 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 PARP3Q9Y6F1 533 aa10.69□□□□□ -0.7
PRPF40A-206ENST00000471167 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
PRPF40A-206ENST00000471167 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-206ENST00000471167 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
PRPF40A-206ENST00000471167 ZNF594Q96JF6 807 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-206ENST00000471167 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
PRPF40A-206ENST00000471167 PTK7Q13308 1070 aa10.67□□□□□ -0.7
PRPF40A-206ENST00000471167 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
PRPF40A-206ENST00000471167 GMCL1Q96IK5 515 aa10.67□□□□□ -0.7
PRPF40A-206ENST00000471167 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-206ENST00000471167 BACH1O14867 736 aa10.66□□□□□ -0.7
PRPF40A-206ENST00000471167 RASA1P20936 1047 aa10.66□□□□□ -0.7
PRPF40A-206ENST00000471167 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
PRPF40A-206ENST00000471167 SRPK2P78362 688 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-206ENST00000471167 NUCKS1Q9H1E3 243 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-206ENST00000471167 C21orf2O43822 256 aa10.65□□□□□ -0.7
PRPF40A-206ENST00000471167 TXLNAP40222 546 aa10.65□□□□□ -0.7
PRPF40A-206ENST00000471167 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
PRPF40A-206ENST00000471167 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-206ENST00000471167 ARXQ96QS3 562 aa10.65□□□□□ -0.7
PRPF40A-206ENST00000471167 NDFIP2Q9NV92 336 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms