RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
SCG5-204ENST00000471027 KDRP35968 1356 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 DIAPH1O60610 1272 aaKnown RBP12.06□□□□□ -0.48
SCG5-204ENST00000471027 IL13P35225 146 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
SCG5-204ENST00000471027 RPS6KA4O75676 772 aa12.05□□□□□ -0.48
SCG5-204ENST00000471027 TGFB2P61812 414 aa12.05□□□□□ -0.48
SCG5-204ENST00000471027 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
SCG5-204ENST00000471027 CFAP53Q96M91 514 aa12.05□□□□□ -0.48
SCG5-204ENST00000471027 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
SCG5-204ENST00000471027 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
SCG5-204ENST00000471027 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
SCG5-204ENST00000471027 ITPK1Q13572 414 aa12.03□□□□□ -0.48
SCG5-204ENST00000471027 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
SCG5-204ENST00000471027 PARP3Q9Y6F1 533 aa12.03□□□□□ -0.48
SCG5-204ENST00000471027 C5P01031 1676 aa12.03□□□□□ -0.48
SCG5-204ENST00000471027 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
SCG5-204ENST00000471027 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.49
SCG5-204ENST00000471027 PTCD1O75127 700 aaKnown RBP12.02□□□□□ -0.49
SCG5-204ENST00000471027 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
SCG5-204ENST00000471027 MMP10P09238 476 aa12.02□□□□□ -0.49
SCG5-204ENST00000471027 NUDCQ9Y266 331 aa12.02□□□□□ -0.49
SCG5-204ENST00000471027 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
SCG5-204ENST00000471027 CC2D1BQ5T0F9 858 aaKnown RBP12.01□□□□□ -0.49
SCG5-204ENST00000471027 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
SCG5-204ENST00000471027 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
SCG5-204ENST00000471027 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
SCG5-204ENST00000471027 GAS2L2Q8NHY3 880 aa12.01□□□□□ -0.49
SCG5-204ENST00000471027 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
SCG5-204ENST00000471027 SLC52A2Q9HAB3 445 aa12.01□□□□□ -0.49
SCG5-204ENST00000471027 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
SCG5-204ENST00000471027 ZPR1O75312 459 aa12□□□□□ -0.49
SCG5-204ENST00000471027 C1QTNF8P60827 252 aa12□□□□□ -0.49
SCG5-204ENST00000471027 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
SCG5-204ENST00000471027 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
SCG5-204ENST00000471027 STARD3NLO95772 234 aa11.99□□□□□ -0.49
SCG5-204ENST00000471027 TEFQ10587 303 aa11.99□□□□□ -0.49
SCG5-204ENST00000471027 ZNF831Q5JPB2 1677 aa11.98□□□□□ -0.49
SCG5-204ENST00000471027 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
SCG5-204ENST00000471027 NEFMP07197 916 aa11.98□□□□□ -0.49
SCG5-204ENST00000471027 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCG5-204ENST00000471027 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
SCG5-204ENST00000471027 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
SCG5-204ENST00000471027 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
SCG5-204ENST00000471027 RNMTO43148 476 aaKnown RBP11.97□□□□□ -0.49
SCG5-204ENST00000471027 HMOX1P09601 288 aa11.97□□□□□ -0.49
SCG5-204ENST00000471027 GYS1P13807 737 aa11.97□□□□□ -0.49
SCG5-204ENST00000471027 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
SCG5-204ENST00000471027 A0A087WZG4 1122 aa11.96□□□□□ -0.49
SCG5-204ENST00000471027 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.49
SCG5-204ENST00000471027 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
SCG5-204ENST00000471027 ITGB4P16144 1822 aa11.95□□□□□ -0.5
SCG5-204ENST00000471027 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
SCG5-204ENST00000471027 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
SCG5-204ENST00000471027 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
SCG5-204ENST00000471027 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
SCG5-204ENST00000471027 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
SCG5-204ENST00000471027 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
SCG5-204ENST00000471027 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
SCG5-204ENST00000471027 TAF1LQ8IZX4 1826 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 FCHSD2O94868 740 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
SCG5-204ENST00000471027 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
SCG5-204ENST00000471027 CHD4Q14839 1912 aa11.92□□□□□ -0.5
SCG5-204ENST00000471027 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
SCG5-204ENST00000471027 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
SCG5-204ENST00000471027 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
SCG5-204ENST00000471027 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
SCG5-204ENST00000471027 FMNL2Q96PY5 1086 aa11.92□□□□□ -0.5
SCG5-204ENST00000471027 C10orf71Q711Q0 1435 aa11.92□□□□□ -0.5
SCG5-204ENST00000471027 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
SCG5-204ENST00000471027 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 ATP10DQ9P241 1426 aa11.91□□□□□ -0.5
SCG5-204ENST00000471027 MRC1P22897 1456 aa11.9□□□□□ -0.5
SCG5-204ENST00000471027 UTRNP46939 3433 aa11.9□□□□□ -0.5
SCG5-204ENST00000471027 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
SCG5-204ENST00000471027 TM4SF1P30408 202 aa11.9□□□□□ -0.5
SCG5-204ENST00000471027 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCG5-204ENST00000471027 FKBP8Q14318 412 aa11.9□□□□□ -0.5
SCG5-204ENST00000471027 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 DPEP1P16444 411 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 IL6STP40189 918 aaPredicted RBP11.89□□□□□ -0.51
SCG5-204ENST00000471027 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 COL15A1P39059 1388 aa11.89□□□□□ -0.51
SCG5-204ENST00000471027 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
SCG5-204ENST00000471027 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms