RNA–Protein interactions for RNA: ENST00000470743.4

SDHC-206, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 5

Gene SDHC, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-206ENST00000470743 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
SDHC-206ENST00000470743 CYP27B1O15528 508 aa13.07□□□□□ -0.32
SDHC-206ENST00000470743 SIK1P57059 783 aa13.07□□□□□ -0.32
SDHC-206ENST00000470743 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
SDHC-206ENST00000470743 PIGBQ92521 554 aa13.06□□□□□ -0.32
SDHC-206ENST00000470743 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
SDHC-206ENST00000470743 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
SDHC-206ENST00000470743 SBF1O95248 1867 aa13.06□□□□□ -0.32
SDHC-206ENST00000470743 DPEP1P16444 411 aa13.05□□□□□ -0.32
SDHC-206ENST00000470743 INSRP06213 1382 aa13.05□□□□□ -0.32
SDHC-206ENST00000470743 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
SDHC-206ENST00000470743 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
SDHC-206ENST00000470743 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
SDHC-206ENST00000470743 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
SDHC-206ENST00000470743 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
SDHC-206ENST00000470743 RNF181Q9P0P0 153 aa13.04□□□□□ -0.32
SDHC-206ENST00000470743 FLT4P35916 1363 aa13.04□□□□□ -0.32
SDHC-206ENST00000470743 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
SDHC-206ENST00000470743 ITPK1Q13572 414 aa13.03□□□□□ -0.32
SDHC-206ENST00000470743 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
SDHC-206ENST00000470743 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
SDHC-206ENST00000470743 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
SDHC-206ENST00000470743 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.32
SDHC-206ENST00000470743 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.32
SDHC-206ENST00000470743 TMF1P82094 1093 aa13.02□□□□□ -0.33
SDHC-206ENST00000470743 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
SDHC-206ENST00000470743 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
SDHC-206ENST00000470743 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
SDHC-206ENST00000470743 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
SDHC-206ENST00000470743 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
SDHC-206ENST00000470743 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
SDHC-206ENST00000470743 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
SDHC-206ENST00000470743 KDRP35968 1356 aa13□□□□□ -0.33
SDHC-206ENST00000470743 KIF24Q5T7B8 1368 aa13□□□□□ -0.33
SDHC-206ENST00000470743 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
SDHC-206ENST00000470743 DCAF5Q96JK2 942 aa13□□□□□ -0.33
SDHC-206ENST00000470743 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
SDHC-206ENST00000470743 PIM2Q9P1W9 311 aa13□□□□□ -0.33
SDHC-206ENST00000470743 SPG7Q9UQ90 795 aa13□□□□□ -0.33
SDHC-206ENST00000470743 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
SDHC-206ENST00000470743 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
SDHC-206ENST00000470743 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
SDHC-206ENST00000470743 GYS1P13807 737 aa12.98□□□□□ -0.33
SDHC-206ENST00000470743 RFC4P35249 363 aa12.98□□□□□ -0.33
SDHC-206ENST00000470743 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
SDHC-206ENST00000470743 FYB1O15117 783 aa12.97□□□□□ -0.33
SDHC-206ENST00000470743 KCNA3P22001 575 aa12.97□□□□□ -0.33
SDHC-206ENST00000470743 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
SDHC-206ENST00000470743 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
SDHC-206ENST00000470743 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
SDHC-206ENST00000470743 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
SDHC-206ENST00000470743 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
SDHC-206ENST00000470743 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
SDHC-206ENST00000470743 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
SDHC-206ENST00000470743 SLC34A2O95436 690 aa12.95□□□□□ -0.34
SDHC-206ENST00000470743 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
SDHC-206ENST00000470743 PHKG2P15735 406 aa12.94□□□□□ -0.34
SDHC-206ENST00000470743 RASSF7Q02833 373 aa12.94□□□□□ -0.34
SDHC-206ENST00000470743 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
SDHC-206ENST00000470743 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
SDHC-206ENST00000470743 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
SDHC-206ENST00000470743 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
SDHC-206ENST00000470743 CHRNA5P30532 468 aa12.93□□□□□ -0.34
SDHC-206ENST00000470743 TESK2Q96S53 571 aa12.93□□□□□ -0.34
SDHC-206ENST00000470743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
SDHC-206ENST00000470743 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
SDHC-206ENST00000470743 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
SDHC-206ENST00000470743 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
SDHC-206ENST00000470743 TJP1Q07157 1748 aa12.92□□□□□ -0.34
SDHC-206ENST00000470743 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
SDHC-206ENST00000470743 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
SDHC-206ENST00000470743 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
SDHC-206ENST00000470743 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
SDHC-206ENST00000470743 DDR1Q08345 913 aa12.91□□□□□ -0.34
SDHC-206ENST00000470743 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
SDHC-206ENST00000470743 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
SDHC-206ENST00000470743 LMNB1P20700 586 aa12.9□□□□□ -0.34
SDHC-206ENST00000470743 FKBP8Q14318 412 aa12.9□□□□□ -0.34
SDHC-206ENST00000470743 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
SDHC-206ENST00000470743 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
SDHC-206ENST00000470743 EYA1Q99502 592 aa12.89□□□□□ -0.35
SDHC-206ENST00000470743 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
SDHC-206ENST00000470743 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
SDHC-206ENST00000470743 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
SDHC-206ENST00000470743 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
SDHC-206ENST00000470743 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
SDHC-206ENST00000470743 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
SDHC-206ENST00000470743 FOXN1O15353 648 aa12.87□□□□□ -0.35
SDHC-206ENST00000470743 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
SDHC-206ENST00000470743 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
SDHC-206ENST00000470743 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
SDHC-206ENST00000470743 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
SDHC-206ENST00000470743 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
SDHC-206ENST00000470743 CABP4P57796 275 aa12.85□□□□□ -0.35
SDHC-206ENST00000470743 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
SDHC-206ENST00000470743 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
SDHC-206ENST00000470743 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
SDHC-206ENST00000470743 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
SDHC-206ENST00000470743 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
SDHC-206ENST00000470743 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms