RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
COL9A1-206ENST00000470652 CLN3Q13286 438 aa8.33□□□□□ -1.08
COL9A1-206ENST00000470652 NCOA4Q13772 614 aa8.33□□□□□ -1.08
COL9A1-206ENST00000470652 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
COL9A1-206ENST00000470652 LYSMD3Q7Z3D4 306 aa8.33□□□□□ -1.08
COL9A1-206ENST00000470652 PLEKHM2Q8IWE5 1019 aa8.33□□□□□ -1.08
COL9A1-206ENST00000470652 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
COL9A1-206ENST00000470652 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
COL9A1-206ENST00000470652 MEN1O00255 615 aa8.32□□□□□ -1.08
COL9A1-206ENST00000470652 RNF144AP50876 292 aaPredicted RBP8.32□□□□□ -1.08
COL9A1-206ENST00000470652 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
COL9A1-206ENST00000470652 PRICKLE2Q7Z3G6 844 aa8.32□□□□□ -1.08
COL9A1-206ENST00000470652 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
COL9A1-206ENST00000470652 TFIP11Q9UBB9 837 aaKnown RBP8.32□□□□□ -1.08
COL9A1-206ENST00000470652 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 PALM3A6NDB9 673 aaPredicted RBP8.31□□□□□ -1.08
COL9A1-206ENST00000470652 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
COL9A1-206ENST00000470652 FOXK2Q01167 660 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 DEPDC4Q8N2C3 294 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
COL9A1-206ENST00000470652 GAS6Q14393 721 aa8.3□□□□□ -1.08
COL9A1-206ENST00000470652 TRIM50Q86XT4 487 aa8.3□□□□□ -1.08
COL9A1-206ENST00000470652 ENAMQ9NRM1 1142 aa8.3□□□□□ -1.08
COL9A1-206ENST00000470652 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
COL9A1-206ENST00000470652 RHOQP17081 205 aa8.29□□□□□ -1.08
COL9A1-206ENST00000470652 XAGE2Q96GT9 111 aa8.29□□□□□ -1.08
COL9A1-206ENST00000470652 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
COL9A1-206ENST00000470652 MAFBQ9Y5Q3 323 aaPredicted RBP8.29□□□□□ -1.08
COL9A1-206ENST00000470652 IL2RAP01589 272 aa8.28□□□□□ -1.08
COL9A1-206ENST00000470652 ATP1A2P50993 1020 aa8.28□□□□□ -1.08
COL9A1-206ENST00000470652 GTF2IP78347 998 aa8.28□□□□□ -1.08
COL9A1-206ENST00000470652 SLC27A3Q5K4L6 730 aa8.28□□□□□ -1.08
COL9A1-206ENST00000470652 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
COL9A1-206ENST00000470652 WASLO00401 505 aaPredicted RBP8.27□□□□□ -1.09
COL9A1-206ENST00000470652 INHAP05111 366 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 GDF10P55107 478 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 CENPCQ03188 943 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 GRIP2Q9C0E4 1043 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
COL9A1-206ENST00000470652 HRH3Q9Y5N1 445 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
COL9A1-206ENST00000470652 GPR25O00155 361 aa8.26□□□□□ -1.09
COL9A1-206ENST00000470652 SCNN1DP51172 638 aa8.26□□□□□ -1.09
COL9A1-206ENST00000470652 PSME1Q06323 249 aa8.26□□□□□ -1.09
COL9A1-206ENST00000470652 STAU1O95793 577 aaKnown RBP8.25□□□□□ -1.09
COL9A1-206ENST00000470652 LMOD1P29536 600 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-206ENST00000470652 DBN1Q16643 649 aa8.25□□□□□ -1.09
COL9A1-206ENST00000470652 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
COL9A1-206ENST00000470652 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-206ENST00000470652 MBIPQ9NS73 344 aa8.25□□□□□ -1.09
COL9A1-206ENST00000470652 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
COL9A1-206ENST00000470652 LARGE2Q8N3Y3 721 aa8.24□□□□□ -1.09
COL9A1-206ENST00000470652 BEND7Q8N7W2 519 aaPredicted RBP8.24□□□□□ -1.09
COL9A1-206ENST00000470652 NEDD1Q8NHV4 660 aa8.24□□□□□ -1.09
COL9A1-206ENST00000470652 GMCL1Q96IK5 515 aa8.24□□□□□ -1.09
COL9A1-206ENST00000470652 ZSCAN10Q96SZ4 725 aaPredicted RBP8.24□□□□□ -1.09
COL9A1-206ENST00000470652 DNAAF2Q9NVR5 837 aaKnown RBP8.24□□□□□ -1.09
COL9A1-206ENST00000470652 IGF1RP08069 1367 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 SPATA31C2B4DYI2 1134 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 MSTNO14793 375 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 BACH1O14867 736 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 TLR1Q15399 786 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 SLC4A9Q96Q91 983 aa8.23□□□□□ -1.09
COL9A1-206ENST00000470652 GAS2L1Q99501 681 aaPredicted RBP8.23□□□□□ -1.09
COL9A1-206ENST00000470652 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
COL9A1-206ENST00000470652 BCRP11274 1271 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 RASA1P20936 1047 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 SMTNP53814 917 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 CLDN10P78369 228 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 POU4F2Q12837 409 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 PLA2G4EQ3MJ16 856 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 CFAP70Q5T0N1 1121 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 KANK4Q5T7N3 995 aaPredicted RBP8.22□□□□□ -1.09
COL9A1-206ENST00000470652 TMEM214Q6NUQ4 689 aaKnown RBP8.22□□□□□ -1.09
COL9A1-206ENST00000470652 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
COL9A1-206ENST00000470652 DCAF5Q96JK2 942 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
COL9A1-206ENST00000470652 VRTNQ9H8Y1 702 aa8.22□□□□□ -1.09
COL9A1-206ENST00000470652 ARID3CA6NKF2 412 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 NBPF10Q6P3W6 841 aaKnown RBP8.21□□□□□ -1.1
COL9A1-206ENST00000470652 LARP1Q6PKG0 1096 aaKnown RBP8.21□□□□□ -1.1
COL9A1-206ENST00000470652 TAS1R3Q7RTX0 852 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 PODNQ7Z5L7 613 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 NBPF15Q8N660 670 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 TPCN2Q8NHX9 752 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
COL9A1-206ENST00000470652 SERTAD1Q9UHV2 236 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms