RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 NKX1-1Q15270 411 aaPredicted RBP20.15■□□□□ 0.82
STRC-208ENST00000470279 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
STRC-208ENST00000470279 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
STRC-208ENST00000470279 FLT4P35916 1363 aa20.15■□□□□ 0.82
STRC-208ENST00000470279 PLEKHG2Q9H7P9 1386 aa20.15■□□□□ 0.82
STRC-208ENST00000470279 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
STRC-208ENST00000470279 FYB1O15117 783 aa20.14■□□□□ 0.81
STRC-208ENST00000470279 DPEP1P16444 411 aa20.14■□□□□ 0.81
STRC-208ENST00000470279 PRELPP51888 382 aa20.14■□□□□ 0.81
STRC-208ENST00000470279 C9orf131Q5VYM1 1079 aa20.14■□□□□ 0.81
STRC-208ENST00000470279 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 FCHSD2O94868 740 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 TESK2Q96S53 571 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 KIF20BQ96Q89 1820 aa20.13■□□□□ 0.81
STRC-208ENST00000470279 KIF24Q5T7B8 1368 aa20.12■□□□□ 0.81
STRC-208ENST00000470279 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
STRC-208ENST00000470279 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
STRC-208ENST00000470279 TMF1P82094 1093 aa20.1■□□□□ 0.81
STRC-208ENST00000470279 NLGN1Q8N2Q7 840 aa20.1■□□□□ 0.81
STRC-208ENST00000470279 CCDC87Q9NVE4 849 aa20.1■□□□□ 0.81
STRC-208ENST00000470279 KDRP35968 1356 aa20.09■□□□□ 0.81
STRC-208ENST00000470279 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
STRC-208ENST00000470279 KDM2BQ8NHM5 1336 aa20.08■□□□□ 0.81
STRC-208ENST00000470279 COL5A3P25940 1745 aaPredicted RBP20.08■□□□□ 0.81
STRC-208ENST00000470279 ZNF831Q5JPB2 1677 aa20.08■□□□□ 0.81
STRC-208ENST00000470279 KCNA3P22001 575 aa20.08■□□□□ 0.81
STRC-208ENST00000470279 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
STRC-208ENST00000470279 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
STRC-208ENST00000470279 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
STRC-208ENST00000470279 SBF1O95248 1867 aa20.07■□□□□ 0.8
STRC-208ENST00000470279 ST20-MTHFSA0A0A6YYL1 179 aa20.06■□□□□ 0.8
STRC-208ENST00000470279 GYS1P13807 737 aa20.06■□□□□ 0.8
STRC-208ENST00000470279 RRAGCQ9HB90 399 aa20.06■□□□□ 0.8
STRC-208ENST00000470279 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
STRC-208ENST00000470279 ARHGEF1Q92888 912 aaKnown RBP20.05■□□□□ 0.8
STRC-208ENST00000470279 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
STRC-208ENST00000470279 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
STRC-208ENST00000470279 EMILIN1Q9Y6C2 1016 aa20.05■□□□□ 0.8
STRC-208ENST00000470279 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
STRC-208ENST00000470279 ADRA2BP18089 450 aa20.04■□□□□ 0.8
STRC-208ENST00000470279 SMC1BQ8NDV3 1235 aa20.04■□□□□ 0.8
STRC-208ENST00000470279 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
STRC-208ENST00000470279 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
STRC-208ENST00000470279 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
STRC-208ENST00000470279 PHKG2P15735 406 aa20.03■□□□□ 0.8
STRC-208ENST00000470279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.8
STRC-208ENST00000470279 PIM2Q9P1W9 311 aa20.03■□□□□ 0.8
STRC-208ENST00000470279 DALRD3Q5D0E6 543 aaKnown RBP20.02■□□□□ 0.8
STRC-208ENST00000470279 RC3H1Q5TC82 1133 aaKnown RBP20.02■□□□□ 0.8
STRC-208ENST00000470279 IFNL2Q8IZJ0 200 aa20.02■□□□□ 0.8
STRC-208ENST00000470279 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.79
STRC-208ENST00000470279 HSPA1AP0DMV8 641 aaKnown RBP20.01■□□□□ 0.79
STRC-208ENST00000470279 HSPA1BP0DMV9 641 aaKnown RBP20.01■□□□□ 0.79
STRC-208ENST00000470279 RFC4P35249 363 aa20.01■□□□□ 0.79
STRC-208ENST00000470279 SLC24A1O60721 1099 aa20■□□□□ 0.79
STRC-208ENST00000470279 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
STRC-208ENST00000470279 EYA1Q99502 592 aa19.99■□□□□ 0.79
STRC-208ENST00000470279 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
STRC-208ENST00000470279 PPM1GO15355 546 aaPredicted RBP19.97■□□□□ 0.79
STRC-208ENST00000470279 CHRNA5P30532 468 aa19.96■□□□□ 0.79
STRC-208ENST00000470279 DDR1Q08345 913 aa19.96■□□□□ 0.79
STRC-208ENST00000470279 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
STRC-208ENST00000470279 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
STRC-208ENST00000470279 ZC3H4Q9UPT8 1303 aaKnown RBP19.95■□□□□ 0.78
STRC-208ENST00000470279 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
STRC-208ENST00000470279 RASSF7Q02833 373 aa19.94■□□□□ 0.78
STRC-208ENST00000470279 FKBP8Q14318 412 aa19.94■□□□□ 0.78
STRC-208ENST00000470279 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
STRC-208ENST00000470279 TIAM2Q8IVF5 1701 aa19.93■□□□□ 0.78
STRC-208ENST00000470279 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
STRC-208ENST00000470279 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
STRC-208ENST00000470279 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
STRC-208ENST00000470279 TJP1Q07157 1748 aa19.91■□□□□ 0.78
STRC-208ENST00000470279 VEGFAP15692 232 aaPredicted RBP19.91■□□□□ 0.78
STRC-208ENST00000470279 GLTPD2A6NH11 291 aa19.9■□□□□ 0.78
STRC-208ENST00000470279 CRKLP46109 303 aaKnown RBP19.9■□□□□ 0.78
STRC-208ENST00000470279 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
STRC-208ENST00000470279 CCDC88AQ3V6T2 1871 aa19.9■□□□□ 0.78
STRC-208ENST00000470279 POLRMTO00411 1230 aaKnown RBP19.89■□□□□ 0.77
STRC-208ENST00000470279 AFDNP55196 1824 aaKnown RBP19.88■□□□□ 0.77
STRC-208ENST00000470279 LMNB1P20700 586 aa19.88■□□□□ 0.77
STRC-208ENST00000470279 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
STRC-208ENST00000470279 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
STRC-208ENST00000470279 NRXN2Q9P2S2 1712 aa19.86■□□□□ 0.77
STRC-208ENST00000470279 PTCD1O75127 700 aaKnown RBP19.86■□□□□ 0.77
STRC-208ENST00000470279 TM4SF1P30408 202 aa19.86■□□□□ 0.77
STRC-208ENST00000470279 CABP4P57796 275 aa19.86■□□□□ 0.77
STRC-208ENST00000470279 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
STRC-208ENST00000470279 CDCA8Q53HL2 280 aa19.84■□□□□ 0.77
STRC-208ENST00000470279 POTECB2RU33 542 aa19.83■□□□□ 0.77
STRC-208ENST00000470279 ZNF530Q6P9A1 599 aaPredicted RBP19.83■□□□□ 0.77
STRC-208ENST00000470279 SLC34A2O95436 690 aa19.82■□□□□ 0.76
STRC-208ENST00000470279 INTS5Q6P9B9 1019 aaKnown RBP19.82■□□□□ 0.76
STRC-208ENST00000470279 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
STRC-208ENST00000470279 USPL1Q5W0Q7 1092 aa19.81■□□□□ 0.76
STRC-208ENST00000470279 NFKBIEO00221 500 aa19.8■□□□□ 0.76
STRC-208ENST00000470279 ZPR1O75312 459 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms