RNA–Protein interactions for RNA: ENST00000470067.5

CUL4A-206, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-206ENST00000470067 PCDHB3Q9Y5E6 796 aa12.92□□□□□ -0.34
CUL4A-206ENST00000470067 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
CUL4A-206ENST00000470067 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
CUL4A-206ENST00000470067 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 NR1I2O75469 434 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 AP1G2O75843 785 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 MCM6Q14566 821 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
CUL4A-206ENST00000470067 C19orf44Q9H6X5 657 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 METP08581 1390 aa12.9□□□□□ -0.34
CUL4A-206ENST00000470067 SETD1AO15047 1707 aaKnown RBP12.89□□□□□ -0.35
CUL4A-206ENST00000470067 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
CUL4A-206ENST00000470067 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
CUL4A-206ENST00000470067 JCADQ9P266 1359 aa12.89□□□□□ -0.35
CUL4A-206ENST00000470067 HELBQ8NG08 1087 aaPredicted RBP12.88□□□□□ -0.35
CUL4A-206ENST00000470067 DIP2AQ14689 1571 aa12.88□□□□□ -0.35
CUL4A-206ENST00000470067 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
CUL4A-206ENST00000470067 APBB1O00213 710 aa12.87□□□□□ -0.35
CUL4A-206ENST00000470067 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
CUL4A-206ENST00000470067 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
CUL4A-206ENST00000470067 AHDC1Q5TGY3 1603 aaPredicted RBP12.87□□□□□ -0.35
CUL4A-206ENST00000470067 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
CUL4A-206ENST00000470067 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
CUL4A-206ENST00000470067 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
CUL4A-206ENST00000470067 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
CUL4A-206ENST00000470067 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
CUL4A-206ENST00000470067 CLTCL1P53675 1640 aa12.85□□□□□ -0.35
CUL4A-206ENST00000470067 RAD21O60216 631 aa12.85□□□□□ -0.35
CUL4A-206ENST00000470067 SCUBE3Q8IX30 993 aa12.85□□□□□ -0.35
CUL4A-206ENST00000470067 TSC1Q92574 1164 aa12.85□□□□□ -0.35
CUL4A-206ENST00000470067 TRPM2O94759 1503 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
CUL4A-206ENST00000470067 PTPN5P54829 565 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 SYMPKQ92797 1274 aaKnown RBP12.84□□□□□ -0.35
CUL4A-206ENST00000470067 PRM3Q9NNZ6 103 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 MST1RQ04912 1400 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 NAIPQ13075 1403 aa12.84□□□□□ -0.35
CUL4A-206ENST00000470067 ATF3P18847 181 aa12.83□□□□□ -0.36
CUL4A-206ENST00000470067 PRR7Q8TB68 274 aa12.83□□□□□ -0.36
CUL4A-206ENST00000470067 SHPRHQ149N8 1683 aa12.83□□□□□ -0.36
CUL4A-206ENST00000470067 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
CUL4A-206ENST00000470067 BLOC1S3Q6QNY0 202 aa12.82□□□□□ -0.36
CUL4A-206ENST00000470067 CFAP99D6REC4 459 aa12.81□□□□□ -0.36
CUL4A-206ENST00000470067 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
CUL4A-206ENST00000470067 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
CUL4A-206ENST00000470067 ASXL1Q8IXJ9 1541 aa12.81□□□□□ -0.36
CUL4A-206ENST00000470067 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
CUL4A-206ENST00000470067 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
CUL4A-206ENST00000470067 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 COPS2P61201 443 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 CTDSPL2Q05D32 466 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
CUL4A-206ENST00000470067 NHSL1Q5SYE7 1610 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 DCCP43146 1447 aa12.79□□□□□ -0.36
CUL4A-206ENST00000470067 A6NJR5 290 aa12.78□□□□□ -0.36
CUL4A-206ENST00000470067 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
CUL4A-206ENST00000470067 RNF19BQ6ZMZ0 732 aa12.78□□□□□ -0.36
CUL4A-206ENST00000470067 ADGRL3Q9HAR2 1447 aa12.78□□□□□ -0.36
CUL4A-206ENST00000470067 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
CUL4A-206ENST00000470067 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
CUL4A-206ENST00000470067 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
CUL4A-206ENST00000470067 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
CUL4A-206ENST00000470067 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
CUL4A-206ENST00000470067 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
CUL4A-206ENST00000470067 AFF2P51816 1311 aa12.75□□□□□ -0.37
CUL4A-206ENST00000470067 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
CUL4A-206ENST00000470067 SPSB2Q99619 263 aa12.75□□□□□ -0.37
CUL4A-206ENST00000470067 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
CUL4A-206ENST00000470067 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
CUL4A-206ENST00000470067 EP400Q96L91 3159 aa12.74□□□□□ -0.37
CUL4A-206ENST00000470067 KIF1BO60333 1816 aa12.74□□□□□ -0.37
CUL4A-206ENST00000470067 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-206ENST00000470067 MTRQ99707 1265 aa12.73□□□□□ -0.37
CUL4A-206ENST00000470067 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
CUL4A-206ENST00000470067 LAMC1P11047 1609 aa12.73□□□□□ -0.37
CUL4A-206ENST00000470067 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
CUL4A-206ENST00000470067 ADGRF5Q8IZF2 1346 aa12.72□□□□□ -0.37
CUL4A-206ENST00000470067 ZPR1O75312 459 aa12.72□□□□□ -0.37
CUL4A-206ENST00000470067 LRRC59Q96AG4 307 aaKnown RBP12.72□□□□□ -0.37
CUL4A-206ENST00000470067 IL21Q9HBE4 155 aa12.72□□□□□ -0.37
CUL4A-206ENST00000470067 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
CUL4A-206ENST00000470067 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
CUL4A-206ENST00000470067 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
CUL4A-206ENST00000470067 RXRBP28702 533 aa12.71□□□□□ -0.37
CUL4A-206ENST00000470067 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
CUL4A-206ENST00000470067 PPLO60437 1756 aa12.71□□□□□ -0.38
CUL4A-206ENST00000470067 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
CUL4A-206ENST00000470067 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
CUL4A-206ENST00000470067 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
CUL4A-206ENST00000470067 LRRN4Q8WUT4 740 aa12.7□□□□□ -0.38
CUL4A-206ENST00000470067 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
CUL4A-206ENST00000470067 JUNDP17535 347 aa12.69□□□□□ -0.38
CUL4A-206ENST00000470067 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-206ENST00000470067 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
CUL4A-206ENST00000470067 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
CUL4A-206ENST00000470067 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms