RNA–Protein interactions for RNA: ENST00000470065.3

RN7SL401P-201, Transcript of RNA, 7SL, cytoplasmic 401, pseudogene, humanhuman

BASIC

Gene RN7SL401P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL401P-201ENST00000470065 GNPATO15228 680 aa11.86□□□□□ -0.51
RN7SL401P-201ENST00000470065 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
RN7SL401P-201ENST00000470065 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
RN7SL401P-201ENST00000470065 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
RN7SL401P-201ENST00000470065 KDRP35968 1356 aa11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 AKAP4Q5JQC9 854 aa11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
RN7SL401P-201ENST00000470065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
RN7SL401P-201ENST00000470065 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
RN7SL401P-201ENST00000470065 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
RN7SL401P-201ENST00000470065 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
RN7SL401P-201ENST00000470065 GPR162Q16538 588 aa11.83□□□□□ -0.52
RN7SL401P-201ENST00000470065 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
RN7SL401P-201ENST00000470065 YY1P25490 414 aa11.82□□□□□ -0.52
RN7SL401P-201ENST00000470065 SSFA2P28290 1259 aa11.82□□□□□ -0.52
RN7SL401P-201ENST00000470065 ITPK1Q13572 414 aa11.82□□□□□ -0.52
RN7SL401P-201ENST00000470065 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
RN7SL401P-201ENST00000470065 NEFMP07197 916 aa11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 MTHFSDQ2M296 383 aaKnown RBP11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
RN7SL401P-201ENST00000470065 SCN11AQ9UI33 1791 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 TEFQ10587 303 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
RN7SL401P-201ENST00000470065 PRKAR2BP31323 418 aa11.79□□□□□ -0.52
RN7SL401P-201ENST00000470065 RFC4P35249 363 aa11.79□□□□□ -0.52
RN7SL401P-201ENST00000470065 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
RN7SL401P-201ENST00000470065 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
RN7SL401P-201ENST00000470065 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
RN7SL401P-201ENST00000470065 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
RN7SL401P-201ENST00000470065 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
RN7SL401P-201ENST00000470065 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
RN7SL401P-201ENST00000470065 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
RN7SL401P-201ENST00000470065 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
RN7SL401P-201ENST00000470065 NLGN2Q8NFZ4 835 aa11.77□□□□□ -0.53
RN7SL401P-201ENST00000470065 SLC4A9Q96Q91 983 aa11.77□□□□□ -0.53
RN7SL401P-201ENST00000470065 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
RN7SL401P-201ENST00000470065 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
RN7SL401P-201ENST00000470065 ADRA2BP18089 450 aa11.76□□□□□ -0.53
RN7SL401P-201ENST00000470065 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
RN7SL401P-201ENST00000470065 MMP10P09238 476 aa11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 NPM2Q86SE8 214 aaKnown RBP11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
RN7SL401P-201ENST00000470065 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 ZPR1O75312 459 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 DNAJC10Q8IXB1 793 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 PARP3Q9Y6F1 533 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 MRC1P22897 1456 aa11.74□□□□□ -0.53
RN7SL401P-201ENST00000470065 FCHSD2O94868 740 aa11.73□□□□□ -0.53
RN7SL401P-201ENST00000470065 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
RN7SL401P-201ENST00000470065 MAPK8IP3Q9UPT6 1336 aa11.73□□□□□ -0.53
RN7SL401P-201ENST00000470065 CHD4Q14839 1912 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 BTBD11A6QL63 1104 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 STARD3NLO95772 234 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 TJP1Q07157 1748 aa11.72□□□□□ -0.53
RN7SL401P-201ENST00000470065 RALBP1Q15311 655 aa11.71□□□□□ -0.53
RN7SL401P-201ENST00000470065 MCM10Q7L590 875 aa11.71□□□□□ -0.53
RN7SL401P-201ENST00000470065 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
RN7SL401P-201ENST00000470065 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
RN7SL401P-201ENST00000470065 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 GYS1P13807 737 aa11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 VSIG10Q8N0Z9 540 aa11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
RN7SL401P-201ENST00000470065 ADAMTS7Q9UKP4 1686 aa11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
RN7SL401P-201ENST00000470065 COL15A1P39059 1388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms