RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 IFNL2Q8IZJ0 200 aa25.42■■□□□ 1.66
TTC28-205ENST00000469670 EYA1Q99502 592 aa25.42■■□□□ 1.66
TTC28-205ENST00000469670 CARD14Q9BXL6 1004 aa25.42■■□□□ 1.66
TTC28-205ENST00000469670 ATG3Q9NT62 314 aa25.42■■□□□ 1.66
TTC28-205ENST00000469670 A0A0G2JLW4 131 aa25.41■■□□□ 1.66
TTC28-205ENST00000469670 CDCA8Q53HL2 280 aa25.41■■□□□ 1.66
TTC28-205ENST00000469670 DNAJC5GQ8N7S2 189 aa25.41■■□□□ 1.66
TTC28-205ENST00000469670 WASHC2AQ641Q2 1341 aa25.4■■□□□ 1.66
TTC28-205ENST00000469670 TRAPPC3LQ5T215 181 aa25.4■■□□□ 1.66
TTC28-205ENST00000469670 ARHGAP27Q6ZUM4 889 aa25.4■■□□□ 1.66
TTC28-205ENST00000469670 NLGN1Q8N2Q7 840 aa25.4■■□□□ 1.66
TTC28-205ENST00000469670 RTCBQ9Y3I0 505 aaKnown RBP25.4■■□□□ 1.66
TTC28-205ENST00000469670 C10orf71Q711Q0 1435 aa25.38■■□□□ 1.65
TTC28-205ENST00000469670 NMRK2Q9NPI5 230 aa25.37■■□□□ 1.65
TTC28-205ENST00000469670 KIAA1551Q9HCM1 1747 aa25.37■■□□□ 1.65
TTC28-205ENST00000469670 KDRP35968 1356 aa25.36■■□□□ 1.65
TTC28-205ENST00000469670 DPEP1P16444 411 aa25.36■■□□□ 1.65
TTC28-205ENST00000469670 CCDC87Q9NVE4 849 aa25.36■■□□□ 1.65
TTC28-205ENST00000469670 KIF13BQ9NQT8 1826 aa25.35■■□□□ 1.65
TTC28-205ENST00000469670 FCHSD2O94868 740 aa25.35■■□□□ 1.65
TTC28-205ENST00000469670 ARHGEF1Q92888 912 aaKnown RBP25.35■■□□□ 1.65
TTC28-205ENST00000469670 SLC4A9Q96Q91 983 aa25.35■■□□□ 1.65
TTC28-205ENST00000469670 ADRA2BP18089 450 aa25.34■■□□□ 1.65
TTC28-205ENST00000469670 N4BP2Q86UW6 1770 aaPredicted RBP25.33■■□□□ 1.65
TTC28-205ENST00000469670 GYS1P13807 737 aa25.33■■□□□ 1.65
TTC28-205ENST00000469670 RC3H1Q5TC82 1133 aaKnown RBP25.33■■□□□ 1.65
TTC28-205ENST00000469670 RBM42Q9BTD8 480 aaKnown RBP25.33■■□□□ 1.65
TTC28-205ENST00000469670 PARP3Q9Y6F1 533 aa25.32■■□□□ 1.64
TTC28-205ENST00000469670 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
TTC28-205ENST00000469670 RFC4P35249 363 aa25.31■■□□□ 1.64
TTC28-205ENST00000469670 RBM46Q8TBY0 533 aaKnown RBP25.31■■□□□ 1.64
TTC28-205ENST00000469670 POLKQ9UBT6 870 aa25.31■■□□□ 1.64
TTC28-205ENST00000469670 ERVV-2B6SEH9 535 aa25.3■■□□□ 1.64
TTC28-205ENST00000469670 RPS6KA4O75676 772 aa25.3■■□□□ 1.64
TTC28-205ENST00000469670 C9orf131Q5VYM1 1079 aa25.3■■□□□ 1.64
TTC28-205ENST00000469670 CNTNAP4Q9C0A0 1308 aa25.3■■□□□ 1.64
TTC28-205ENST00000469670 KCNA3P22001 575 aa25.29■■□□□ 1.64
TTC28-205ENST00000469670 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
TTC28-205ENST00000469670 C4AP0C0L4 1744 aa25.29■■□□□ 1.64
TTC28-205ENST00000469670 EIF4A2Q14240 407 aaKnown RBP25.28■■□□□ 1.64
TTC28-205ENST00000469670 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
TTC28-205ENST00000469670 HSP90AB1P08238 724 aaKnown RBP25.26■■□□□ 1.63
TTC28-205ENST00000469670 DCAF5Q96JK2 942 aa25.26■■□□□ 1.63
TTC28-205ENST00000469670 PIM2Q9P1W9 311 aa25.26■■□□□ 1.63
TTC28-205ENST00000469670 HTRA3P83110 453 aa25.25■■□□□ 1.63
TTC28-205ENST00000469670 KLRG1Q96E93 195 aa25.25■■□□□ 1.63
TTC28-205ENST00000469670 ZNF831Q5JPB2 1677 aa25.25■■□□□ 1.63
TTC28-205ENST00000469670 FSTL1Q12841 308 aa25.24■■□□□ 1.63
TTC28-205ENST00000469670 WDR90Q96KV7 1748 aa25.23■■□□□ 1.63
TTC28-205ENST00000469670 KDM2BQ8NHM5 1336 aa25.22■■□□□ 1.63
TTC28-205ENST00000469670 CABP4P57796 275 aa25.22■■□□□ 1.63
TTC28-205ENST00000469670 DALRD3Q5D0E6 543 aaKnown RBP25.22■■□□□ 1.63
TTC28-205ENST00000469670 COL5A3P25940 1745 aaPredicted RBP25.21■■□□□ 1.63
TTC28-205ENST00000469670 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
TTC28-205ENST00000469670 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
TTC28-205ENST00000469670 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
TTC28-205ENST00000469670 RNF181Q9P0P0 153 aa25.21■■□□□ 1.63
TTC28-205ENST00000469670 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
TTC28-205ENST00000469670 KCPQ6ZWJ8 1503 aa25.21■■□□□ 1.63
TTC28-205ENST00000469670 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.63
TTC28-205ENST00000469670 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
TTC28-205ENST00000469670 PTCD1O75127 700 aaKnown RBP25.19■■□□□ 1.62
TTC28-205ENST00000469670 DDR1Q08345 913 aa25.19■■□□□ 1.62
TTC28-205ENST00000469670 FKBP8Q14318 412 aa25.19■■□□□ 1.62
TTC28-205ENST00000469670 COL13A1Q5TAT6 717 aaPredicted RBP25.19■■□□□ 1.62
TTC28-205ENST00000469670 ZNF530Q6P9A1 599 aaPredicted RBP25.19■■□□□ 1.62
TTC28-205ENST00000469670 CRKLP46109 303 aaKnown RBP25.18■■□□□ 1.62
TTC28-205ENST00000469670 RRAGCQ9HB90 399 aa25.18■■□□□ 1.62
TTC28-205ENST00000469670 USP42Q9H9J4 1324 aaKnown RBP25.17■■□□□ 1.62
TTC28-205ENST00000469670 AMOTQ4VCS5 1084 aa25.17■■□□□ 1.62
TTC28-205ENST00000469670 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
TTC28-205ENST00000469670 CHRNA5P30532 468 aa25.16■■□□□ 1.62
TTC28-205ENST00000469670 MTHFSP49914 203 aa25.15■■□□□ 1.62
TTC28-205ENST00000469670 MYH14Q7Z406 1995 aaKnown RBP25.14■■□□□ 1.61
TTC28-205ENST00000469670 NFATC2IPQ8NCF5 419 aa25.13■■□□□ 1.61
TTC28-205ENST00000469670 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
TTC28-205ENST00000469670 C1orf141Q5JVX7 400 aa25.12■■□□□ 1.61
TTC28-205ENST00000469670 SMC1BQ8NDV3 1235 aa25.12■■□□□ 1.61
TTC28-205ENST00000469670 TM4SF1P30408 202 aa25.11■■□□□ 1.61
TTC28-205ENST00000469670 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
TTC28-205ENST00000469670 CAPN15O75808 1086 aa25.09■■□□□ 1.61
TTC28-205ENST00000469670 INTS5Q6P9B9 1019 aaKnown RBP25.09■■□□□ 1.61
TTC28-205ENST00000469670 AEBP1Q8IUX7 1158 aa25.09■■□□□ 1.61
TTC28-205ENST00000469670 RASSF7Q02833 373 aa25.08■■□□□ 1.61
TTC28-205ENST00000469670 TNS4Q8IZW8 715 aa25.08■■□□□ 1.61
TTC28-205ENST00000469670 TNRC6CQ9HCJ0 1690 aaKnown RBP25.07■■□□□ 1.6
TTC28-205ENST00000469670 ZPR1O75312 459 aa25.07■■□□□ 1.6
TTC28-205ENST00000469670 USPL1Q5W0Q7 1092 aa25.07■■□□□ 1.6
TTC28-205ENST00000469670 ZC3H4Q9UPT8 1303 aaKnown RBP25.07■■□□□ 1.6
TTC28-205ENST00000469670 TJP1Q07157 1748 aa25.06■■□□□ 1.6
TTC28-205ENST00000469670 DNAJC10Q8IXB1 793 aa25.04■■□□□ 1.6
TTC28-205ENST00000469670 LMNB1P20700 586 aa25.03■■□□□ 1.6
TTC28-205ENST00000469670 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
TTC28-205ENST00000469670 SOS1Q07889 1333 aaPredicted RBP25.03■■□□□ 1.6
TTC28-205ENST00000469670 ADAMTS7Q9UKP4 1686 aa25.02■■□□□ 1.6
TTC28-205ENST00000469670 GLTPD2A6NH11 291 aa25.02■■□□□ 1.6
TTC28-205ENST00000469670 VEGFAP15692 232 aaPredicted RBP25.02■■□□□ 1.6
TTC28-205ENST00000469670 SBF1O95248 1867 aa25.01■■□□□ 1.59
TTC28-205ENST00000469670 PRELPP51888 382 aa25.01■■□□□ 1.59
TTC28-205ENST00000469670 NFIXQ14938 502 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms