RNA–Protein interactions for RNA: ENST00000469241.2

PKD1-205, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 659 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-205ENST00000469241 ATG3Q9NT62 314 aa28.16■■■□□ 2.1
PKD1-205ENST00000469241 GNPATO15228 680 aa28.15■■■□□ 2.1
PKD1-205ENST00000469241 C1orf141Q5JVX7 400 aa28.15■■■□□ 2.1
PKD1-205ENST00000469241 ITPK1Q13572 414 aa28.14■■■□□ 2.1
PKD1-205ENST00000469241 AMIGO3Q86WK7 504 aa28.14■■■□□ 2.1
PKD1-205ENST00000469241 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.1
PKD1-205ENST00000469241 CABP4P57796 275 aa28.13■■■□□ 2.09
PKD1-205ENST00000469241 SULT6B1Q6IMI4 303 aa28.13■■■□□ 2.09
PKD1-205ENST00000469241 SMIM5Q71RC9 77 aa28.13■■■□□ 2.09
PKD1-205ENST00000469241 UTRNP46939 3433 aa28.12■■■□□ 2.09
PKD1-205ENST00000469241 AMER1Q5JTC6 1135 aaPredicted RBP28.12■■■□□ 2.09
PKD1-205ENST00000469241 RBM42Q9BTD8 480 aaKnown RBP28.12■■■□□ 2.09
PKD1-205ENST00000469241 CD2APQ9Y5K6 639 aa28.12■■■□□ 2.09
PKD1-205ENST00000469241 MTHFSP49914 203 aa28.11■■■□□ 2.09
PKD1-205ENST00000469241 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
PKD1-205ENST00000469241 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
PKD1-205ENST00000469241 IL13P35225 146 aa28.09■■■□□ 2.09
PKD1-205ENST00000469241 KDRP35968 1356 aa28.09■■■□□ 2.09
PKD1-205ENST00000469241 YBX3P16989 372 aaKnown RBP eCLIP28.06■■■□□ 2.08
PKD1-205ENST00000469241 ZNF831Q5JPB2 1677 aa28.06■■■□□ 2.08
PKD1-205ENST00000469241 RTCBQ9Y3I0 505 aaKnown RBP28.05■■■□□ 2.08
PKD1-205ENST00000469241 CC2D1BQ5T0F9 858 aaKnown RBP28.04■■■□□ 2.08
PKD1-205ENST00000469241 TRAPPC3LQ5T215 181 aa28.03■■■□□ 2.08
PKD1-205ENST00000469241 SLC4A9Q96Q91 983 aa28.02■■■□□ 2.08
PKD1-205ENST00000469241 COL5A3P25940 1745 aaPredicted RBP28.01■■■□□ 2.07
PKD1-205ENST00000469241 NFATC2IPQ8NCF5 419 aa28.01■■■□□ 2.07
PKD1-205ENST00000469241 CNTNAP4Q9C0A0 1308 aa28■■■□□ 2.07
PKD1-205ENST00000469241 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
PKD1-205ENST00000469241 PTCD1O75127 700 aaKnown RBP28■■■□□ 2.07
PKD1-205ENST00000469241 RC3H1Q5TC82 1133 aaKnown RBP28■■■□□ 2.07
PKD1-205ENST00000469241 ADRA2BP18089 450 aa27.99■■■□□ 2.07
PKD1-205ENST00000469241 AKAP4Q5JQC9 854 aa27.99■■■□□ 2.07
PKD1-205ENST00000469241 HMOX1P09601 288 aa27.98■■■□□ 2.07
PKD1-205ENST00000469241 SCN11AQ9UI33 1791 aa27.98■■■□□ 2.07
PKD1-205ENST00000469241 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
PKD1-205ENST00000469241 MMP10P09238 476 aa27.97■■■□□ 2.07
PKD1-205ENST00000469241 RPS6KA4O75676 772 aa27.96■■■□□ 2.07
PKD1-205ENST00000469241 RFC4P35249 363 aa27.96■■■□□ 2.07
PKD1-205ENST00000469241 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
PKD1-205ENST00000469241 NLGN1Q8N2Q7 840 aa27.96■■■□□ 2.07
PKD1-205ENST00000469241 GOLGB1Q14789 3259 aaKnown RBP27.96■■■□□ 2.07
PKD1-205ENST00000469241 ARHGEF1Q92888 912 aaKnown RBP27.95■■■□□ 2.06
PKD1-205ENST00000469241 WWC3Q9ULE0 1092 aa27.93■■■□□ 2.06
PKD1-205ENST00000469241 NPC1L1Q9UHC9 1359 aa27.91■■■□□ 2.06
PKD1-205ENST00000469241 GIGYF1O75420 1035 aaPredicted RBP27.91■■■□□ 2.06
PKD1-205ENST00000469241 CRKLP46109 303 aaKnown RBP27.91■■■□□ 2.06
PKD1-205ENST00000469241 SLC52A2Q9HAB3 445 aa27.91■■■□□ 2.06
PKD1-205ENST00000469241 CICQ96RK0 1608 aaPredicted RBP27.91■■■□□ 2.06
PKD1-205ENST00000469241 TJP1Q07157 1748 aa27.9■■■□□ 2.06
PKD1-205ENST00000469241 MYH14Q7Z406 1995 aaKnown RBP27.9■■■□□ 2.06
PKD1-205ENST00000469241 C4AP0C0L4 1744 aa27.89■■■□□ 2.06
PKD1-205ENST00000469241 LGR6Q9HBX8 967 aa27.89■■■□□ 2.06
PKD1-205ENST00000469241 RNMTO43148 476 aaKnown RBP27.88■■■□□ 2.05
PKD1-205ENST00000469241 GYS1P13807 737 aa27.88■■■□□ 2.05
PKD1-205ENST00000469241 C1QTNF8P60827 252 aa27.88■■■□□ 2.05
PKD1-205ENST00000469241 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
PKD1-205ENST00000469241 PARP3Q9Y6F1 533 aa27.88■■■□□ 2.05
PKD1-205ENST00000469241 VIRMAQ69YN4 1812 aaKnown RBP27.88■■■□□ 2.05
PKD1-205ENST00000469241 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
PKD1-205ENST00000469241 CCDC87Q9NVE4 849 aa27.87■■■□□ 2.05
PKD1-205ENST00000469241 MRC1P22897 1456 aa27.86■■■□□ 2.05
PKD1-205ENST00000469241 KIF13BQ9NQT8 1826 aa27.85■■■□□ 2.05
PKD1-205ENST00000469241 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
PKD1-205ENST00000469241 TGFB2P61812 414 aa27.84■■■□□ 2.05
PKD1-205ENST00000469241 C10orf71Q711Q0 1435 aa27.84■■■□□ 2.05
PKD1-205ENST00000469241 PXDNLA1KZ92 1463 aa27.83■■■□□ 2.05
PKD1-205ENST00000469241 COL3A1P02461 1466 aaPredicted RBP27.83■■■□□ 2.05
PKD1-205ENST00000469241 SLC39A6Q13433 755 aa27.83■■■□□ 2.05
PKD1-205ENST00000469241 DNAJC10Q8IXB1 793 aa27.83■■■□□ 2.05
PKD1-205ENST00000469241 SRP68Q9UHB9 627 aaKnown RBP27.82■■■□□ 2.04
PKD1-205ENST00000469241 N4BP2Q86UW6 1770 aaPredicted RBP27.81■■■□□ 2.04
PKD1-205ENST00000469241 SENP3-EIF4A1A0A087X0R7 540 aa27.81■■■□□ 2.04
PKD1-205ENST00000469241 USP42Q9H9J4 1324 aaKnown RBP27.81■■■□□ 2.04
PKD1-205ENST00000469241 ADAMTS7Q9UKP4 1686 aa27.81■■■□□ 2.04
PKD1-205ENST00000469241 INTS5Q6P9B9 1019 aaKnown RBP27.8■■■□□ 2.04
PKD1-205ENST00000469241 CFAP53Q96M91 514 aa27.79■■■□□ 2.04
PKD1-205ENST00000469241 KIAA1551Q9HCM1 1747 aa27.78■■■□□ 2.04
PKD1-205ENST00000469241 A0A0G2JLW4 131 aa27.78■■■□□ 2.04
PKD1-205ENST00000469241 GAS2L2Q8NHY3 880 aa27.78■■■□□ 2.04
PKD1-205ENST00000469241 GPBP1L1Q9HC44 474 aaPredicted RBP27.78■■■□□ 2.04
PKD1-205ENST00000469241 BCS1LQ9Y276 419 aa27.78■■■□□ 2.04
PKD1-205ENST00000469241 KCPQ6ZWJ8 1503 aa27.77■■■□□ 2.04
PKD1-205ENST00000469241 ZPR1O75312 459 aa27.77■■■□□ 2.04
PKD1-205ENST00000469241 FKBP8Q14318 412 aa27.77■■■□□ 2.04
PKD1-205ENST00000469241 TTC5Q8N0Z6 440 aa27.77■■■□□ 2.04
PKD1-205ENST00000469241 ADCY9O60503 1353 aa27.76■■■□□ 2.03
PKD1-205ENST00000469241 CYP19A1P11511 503 aaPredicted RBP27.76■■■□□ 2.03
PKD1-205ENST00000469241 GNAT3A8MTJ3 354 aa27.75■■■□□ 2.03
PKD1-205ENST00000469241 DPEP1P16444 411 aa27.75■■■□□ 2.03
PKD1-205ENST00000469241 TEFQ10587 303 aa27.75■■■□□ 2.03
PKD1-205ENST00000469241 VSIG10Q8N0Z9 540 aa27.75■■■□□ 2.03
PKD1-205ENST00000469241 ZNF526Q8TF50 670 aaPredicted RBP27.75■■■□□ 2.03
PKD1-205ENST00000469241 SOS1Q07889 1333 aaPredicted RBP27.74■■■□□ 2.03
PKD1-205ENST00000469241 USPL1Q5W0Q7 1092 aa27.73■■■□□ 2.03
PKD1-205ENST00000469241 FCHSD2O94868 740 aa27.72■■■□□ 2.03
PKD1-205ENST00000469241 UBR2Q8IWV8 1755 aa27.72■■■□□ 2.03
PKD1-205ENST00000469241 COL15A1P39059 1388 aa27.72■■■□□ 2.03
PKD1-205ENST00000469241 DDR1Q08345 913 aa27.71■■■□□ 2.03
PKD1-205ENST00000469241 NUDCQ9Y266 331 aa27.71■■■□□ 2.03
PKD1-205ENST00000469241 ZBTB1Q9Y2K1 713 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms