RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 MMP10P09238 476 aa27.1■■□□□ 1.93
UPK3B-204ENST00000469114 EYA1Q99502 592 aa27.1■■□□□ 1.93
UPK3B-204ENST00000469114 PHKG2P15735 406 aa27.09■■□□□ 1.93
UPK3B-204ENST00000469114 PXDNLA1KZ92 1463 aa27.08■■□□□ 1.93
UPK3B-204ENST00000469114 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
UPK3B-204ENST00000469114 TGFB2P61812 414 aa27.06■■□□□ 1.92
UPK3B-204ENST00000469114 ATG3Q9NT62 314 aa27.06■■□□□ 1.92
UPK3B-204ENST00000469114 KIAA1551Q9HCM1 1747 aa27.06■■□□□ 1.92
UPK3B-204ENST00000469114 N4BP2Q86UW6 1770 aaPredicted RBP27.05■■□□□ 1.92
UPK3B-204ENST00000469114 RTCBQ9Y3I0 505 aaKnown RBP27.05■■□□□ 1.92
UPK3B-204ENST00000469114 TRAPPC3LQ5T215 181 aa27.04■■□□□ 1.92
UPK3B-204ENST00000469114 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
UPK3B-204ENST00000469114 BCS1LQ9Y276 419 aa27.04■■□□□ 1.92
UPK3B-204ENST00000469114 KDRP35968 1356 aa27.03■■□□□ 1.92
UPK3B-204ENST00000469114 APLP1P51693 650 aa27.03■■□□□ 1.92
UPK3B-204ENST00000469114 PLEKHG2Q9H7P9 1386 aa27.03■■□□□ 1.92
UPK3B-204ENST00000469114 ZNF831Q5JPB2 1677 aa27.02■■□□□ 1.92
UPK3B-204ENST00000469114 C10orf71Q711Q0 1435 aa27.02■■□□□ 1.92
UPK3B-204ENST00000469114 POLKQ9UBT6 870 aa27.01■■□□□ 1.91
UPK3B-204ENST00000469114 A0A0G2JLW4 131 aa27■■□□□ 1.91
UPK3B-204ENST00000469114 TOMM70O94826 608 aa27■■□□□ 1.91
UPK3B-204ENST00000469114 ADRA2BP18089 450 aa27■■□□□ 1.91
UPK3B-204ENST00000469114 CCDC87Q9NVE4 849 aa27■■□□□ 1.91
UPK3B-204ENST00000469114 C4AP0C0L4 1744 aa26.99■■□□□ 1.91
UPK3B-204ENST00000469114 RC3H1Q5TC82 1133 aaKnown RBP26.99■■□□□ 1.91
UPK3B-204ENST00000469114 RBM42Q9BTD8 480 aaKnown RBP26.99■■□□□ 1.91
UPK3B-204ENST00000469114 ERVV-2B6SEH9 535 aa26.98■■□□□ 1.91
UPK3B-204ENST00000469114 ARHGAP27Q6ZUM4 889 aa26.98■■□□□ 1.91
UPK3B-204ENST00000469114 COL5A3P25940 1745 aaPredicted RBP26.98■■□□□ 1.91
UPK3B-204ENST00000469114 HSP90AB1P08238 724 aaKnown RBP26.97■■□□□ 1.91
UPK3B-204ENST00000469114 EIF4A2Q14240 407 aaKnown RBP26.97■■□□□ 1.91
UPK3B-204ENST00000469114 ARHGEF1Q92888 912 aaKnown RBP26.97■■□□□ 1.91
UPK3B-204ENST00000469114 CNTNAP4Q9C0A0 1308 aa26.96■■□□□ 1.91
UPK3B-204ENST00000469114 FCHSD2O94868 740 aa26.96■■□□□ 1.91
UPK3B-204ENST00000469114 SLC4A9Q96Q91 983 aa26.96■■□□□ 1.91
UPK3B-204ENST00000469114 PARP3Q9Y6F1 533 aa26.96■■□□□ 1.91
UPK3B-204ENST00000469114 BRCA1P38398 1863 aaKnown RBP26.96■■□□□ 1.91
UPK3B-204ENST00000469114 GYS1P13807 737 aa26.95■■□□□ 1.9
UPK3B-204ENST00000469114 DPEP1P16444 411 aa26.95■■□□□ 1.9
UPK3B-204ENST00000469114 RFC4P35249 363 aa26.95■■□□□ 1.9
UPK3B-204ENST00000469114 DCAF5Q96JK2 942 aa26.95■■□□□ 1.9
UPK3B-204ENST00000469114 RPS6KA4O75676 772 aa26.94■■□□□ 1.9
UPK3B-204ENST00000469114 NMRK2Q9NPI5 230 aa26.92■■□□□ 1.9
UPK3B-204ENST00000469114 ARFGEF1Q9Y6D6 1849 aa26.92■■□□□ 1.9
UPK3B-204ENST00000469114 TNNT2P45379 298 aaPredicted RBP26.91■■□□□ 1.9
UPK3B-204ENST00000469114 PLEKHO1Q53GL0 409 aaPredicted RBP26.91■■□□□ 1.9
UPK3B-204ENST00000469114 DNAJC5GQ8N7S2 189 aa26.9■■□□□ 1.9
UPK3B-204ENST00000469114 MYH14Q7Z406 1995 aaKnown RBP26.89■■□□□ 1.9
UPK3B-204ENST00000469114 CABP4P57796 275 aa26.89■■□□□ 1.9
UPK3B-204ENST00000469114 C9orf131Q5VYM1 1079 aa26.88■■□□□ 1.89
UPK3B-204ENST00000469114 ZNF530Q6P9A1 599 aaPredicted RBP26.88■■□□□ 1.89
UPK3B-204ENST00000469114 C16orf71Q8IYS4 520 aaPredicted RBP26.88■■□□□ 1.89
UPK3B-204ENST00000469114 RBM46Q8TBY0 533 aaKnown RBP26.88■■□□□ 1.89
UPK3B-204ENST00000469114 KDM6AO15550 1401 aaPredicted RBP26.88■■□□□ 1.89
UPK3B-204ENST00000469114 WDR90Q96KV7 1748 aa26.87■■□□□ 1.89
UPK3B-204ENST00000469114 AMOTQ4VCS5 1084 aa26.87■■□□□ 1.89
UPK3B-204ENST00000469114 PIM2Q9P1W9 311 aa26.87■■□□□ 1.89
UPK3B-204ENST00000469114 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
UPK3B-204ENST00000469114 KCNA3P22001 575 aa26.86■■□□□ 1.89
UPK3B-204ENST00000469114 DALRD3Q5D0E6 543 aaKnown RBP26.84■■□□□ 1.89
UPK3B-204ENST00000469114 POLR3GLQ9BT43 218 aa26.84■■□□□ 1.89
UPK3B-204ENST00000469114 PTCD1O75127 700 aaKnown RBP26.83■■□□□ 1.89
UPK3B-204ENST00000469114 CRKLP46109 303 aaKnown RBP26.83■■□□□ 1.89
UPK3B-204ENST00000469114 MTHFSP49914 203 aa26.83■■□□□ 1.89
UPK3B-204ENST00000469114 KDM2BQ8NHM5 1336 aa26.83■■□□□ 1.89
UPK3B-204ENST00000469114 C1orf141Q5JVX7 400 aa26.82■■□□□ 1.88
UPK3B-204ENST00000469114 FSTL1Q12841 308 aa26.81■■□□□ 1.88
UPK3B-204ENST00000469114 SRP68Q9UHB9 627 aaKnown RBP26.81■■□□□ 1.88
UPK3B-204ENST00000469114 USP42Q9H9J4 1324 aaKnown RBP26.81■■□□□ 1.88
UPK3B-204ENST00000469114 FKBP8Q14318 412 aa26.8■■□□□ 1.88
UPK3B-204ENST00000469114 RNF181Q9P0P0 153 aa26.8■■□□□ 1.88
UPK3B-204ENST00000469114 KCPQ6ZWJ8 1503 aa26.8■■□□□ 1.88
UPK3B-204ENST00000469114 DDR1Q08345 913 aa26.79■■□□□ 1.88
UPK3B-204ENST00000469114 TJP1Q07157 1748 aa26.79■■□□□ 1.88
UPK3B-204ENST00000469114 NFATC2IPQ8NCF5 419 aa26.78■■□□□ 1.88
UPK3B-204ENST00000469114 TNRC6CQ9HCJ0 1690 aaKnown RBP26.77■■□□□ 1.88
UPK3B-204ENST00000469114 KLRG1Q96E93 195 aa26.77■■□□□ 1.88
UPK3B-204ENST00000469114 TIMELESSQ9UNS1 1208 aa26.77■■□□□ 1.88
UPK3B-204ENST00000469114 SBF1O95248 1867 aa26.75■■□□□ 1.87
UPK3B-204ENST00000469114 CHRNA5P30532 468 aa26.75■■□□□ 1.87
UPK3B-204ENST00000469114 AEBP1Q8IUX7 1158 aa26.75■■□□□ 1.87
UPK3B-204ENST00000469114 CCER1Q8TC90 406 aaPredicted RBP26.75■■□□□ 1.87
UPK3B-204ENST00000469114 SCN11AQ9UI33 1791 aa26.74■■□□□ 1.87
UPK3B-204ENST00000469114 POLRMTO00411 1230 aaKnown RBP26.73■■□□□ 1.87
UPK3B-204ENST00000469114 HTRA3P83110 453 aa26.73■■□□□ 1.87
UPK3B-204ENST00000469114 JMYQ8N9B5 988 aa26.73■■□□□ 1.87
UPK3B-204ENST00000469114 RRAGCQ9HB90 399 aa26.73■■□□□ 1.87
UPK3B-204ENST00000469114 ADAMTS7Q9UKP4 1686 aa26.73■■□□□ 1.87
UPK3B-204ENST00000469114 ZPR1O75312 459 aa26.72■■□□□ 1.87
UPK3B-204ENST00000469114 TM4SF1P30408 202 aa26.72■■□□□ 1.87
UPK3B-204ENST00000469114 INTS5Q6P9B9 1019 aaKnown RBP26.72■■□□□ 1.87
UPK3B-204ENST00000469114 SULT6B1Q6IMI4 303 aa26.71■■□□□ 1.87
UPK3B-204ENST00000469114 PANK3Q9H999 370 aa26.71■■□□□ 1.87
UPK3B-204ENST00000469114 MORC1Q86VD1 984 aa26.7■■□□□ 1.86
UPK3B-204ENST00000469114 ZC3H4Q9UPT8 1303 aaKnown RBP26.69■■□□□ 1.86
UPK3B-204ENST00000469114 SMC1BQ8NDV3 1235 aa26.69■■□□□ 1.86
UPK3B-204ENST00000469114 USPL1Q5W0Q7 1092 aa26.68■■□□□ 1.86
UPK3B-204ENST00000469114 SOS1Q07889 1333 aaPredicted RBP26.67■■□□□ 1.86
UPK3B-204ENST00000469114 DNAJC10Q8IXB1 793 aa26.67■■□□□ 1.86
UPK3B-204ENST00000469114 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms