RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ANKRD26Q9UPS8 1709 aa16.86■□□□□ 0.29
COL5A1-207ENST00000469093 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
COL5A1-207ENST00000469093 UBR3Q6ZT12 1888 aa16.85■□□□□ 0.29
COL5A1-207ENST00000469093 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
COL5A1-207ENST00000469093 EIF4G2P78344 907 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL5A1-207ENST00000469093 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-207ENST00000469093 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
COL5A1-207ENST00000469093 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
COL5A1-207ENST00000469093 ATP10DQ9P241 1426 aa16.84■□□□□ 0.29
COL5A1-207ENST00000469093 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
COL5A1-207ENST00000469093 MMP10P09238 476 aa16.83■□□□□ 0.28
COL5A1-207ENST00000469093 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
COL5A1-207ENST00000469093 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
COL5A1-207ENST00000469093 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
COL5A1-207ENST00000469093 GPBP1L1Q9HC44 474 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-207ENST00000469093 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
COL5A1-207ENST00000469093 CABP4P57796 275 aa16.81■□□□□ 0.28
COL5A1-207ENST00000469093 AMOTQ4VCS5 1084 aa16.81■□□□□ 0.28
COL5A1-207ENST00000469093 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
COL5A1-207ENST00000469093 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
COL5A1-207ENST00000469093 ADCY9O60503 1353 aa16.8■□□□□ 0.28
COL5A1-207ENST00000469093 KDRP35968 1356 aa16.8■□□□□ 0.28
COL5A1-207ENST00000469093 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
COL5A1-207ENST00000469093 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
COL5A1-207ENST00000469093 AEBP1Q8IUX7 1158 aa16.8■□□□□ 0.28
COL5A1-207ENST00000469093 MTHFSP49914 203 aa16.79■□□□□ 0.28
COL5A1-207ENST00000469093 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-207ENST00000469093 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
COL5A1-207ENST00000469093 ADRA2BP18089 450 aa16.78■□□□□ 0.28
COL5A1-207ENST00000469093 TGFB2P61812 414 aa16.78■□□□□ 0.28
COL5A1-207ENST00000469093 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
COL5A1-207ENST00000469093 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
COL5A1-207ENST00000469093 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
COL5A1-207ENST00000469093 GYS1P13807 737 aa16.77■□□□□ 0.28
COL5A1-207ENST00000469093 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
COL5A1-207ENST00000469093 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
COL5A1-207ENST00000469093 RFC4P35249 363 aa16.76■□□□□ 0.27
COL5A1-207ENST00000469093 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
COL5A1-207ENST00000469093 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
COL5A1-207ENST00000469093 IL13P35225 146 aa16.75■□□□□ 0.27
COL5A1-207ENST00000469093 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
COL5A1-207ENST00000469093 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
COL5A1-207ENST00000469093 BCS1LQ9Y276 419 aa16.74■□□□□ 0.27
COL5A1-207ENST00000469093 DPEP1P16444 411 aa16.73■□□□□ 0.27
COL5A1-207ENST00000469093 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
COL5A1-207ENST00000469093 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
COL5A1-207ENST00000469093 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
COL5A1-207ENST00000469093 KIF3CO14782 793 aa16.72■□□□□ 0.27
COL5A1-207ENST00000469093 HSPA6P17066 643 aa16.72■□□□□ 0.27
COL5A1-207ENST00000469093 KCNA3P22001 575 aa16.72■□□□□ 0.27
COL5A1-207ENST00000469093 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
COL5A1-207ENST00000469093 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
COL5A1-207ENST00000469093 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-207ENST00000469093 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
COL5A1-207ENST00000469093 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
COL5A1-207ENST00000469093 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
COL5A1-207ENST00000469093 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-207ENST00000469093 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
COL5A1-207ENST00000469093 SRP68Q9UHB9 627 aaKnown RBP16.7■□□□□ 0.26
COL5A1-207ENST00000469093 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-207ENST00000469093 CEP350Q5VT06 3117 aa16.69■□□□□ 0.26
COL5A1-207ENST00000469093 FCHSD2O94868 740 aa16.69■□□□□ 0.26
COL5A1-207ENST00000469093 FKBP8Q14318 412 aa16.69■□□□□ 0.26
COL5A1-207ENST00000469093 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
COL5A1-207ENST00000469093 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
COL5A1-207ENST00000469093 SLC52A2Q9HAB3 445 aa16.68■□□□□ 0.26
COL5A1-207ENST00000469093 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
COL5A1-207ENST00000469093 DDR1Q08345 913 aa16.67■□□□□ 0.26
COL5A1-207ENST00000469093 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
COL5A1-207ENST00000469093 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-207ENST00000469093 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-207ENST00000469093 HMOX1P09601 288 aa16.66■□□□□ 0.26
COL5A1-207ENST00000469093 TM4SF1P30408 202 aa16.66■□□□□ 0.26
COL5A1-207ENST00000469093 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
COL5A1-207ENST00000469093 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
COL5A1-207ENST00000469093 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
COL5A1-207ENST00000469093 PER1O15534 1290 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-207ENST00000469093 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
COL5A1-207ENST00000469093 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
COL5A1-207ENST00000469093 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
COL5A1-207ENST00000469093 KIF7Q2M1P5 1343 aa16.64■□□□□ 0.25
COL5A1-207ENST00000469093 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
COL5A1-207ENST00000469093 ZPR1O75312 459 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 TOMM70O94826 608 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 CHRNA5P30532 468 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
COL5A1-207ENST00000469093 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
COL5A1-207ENST00000469093 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 C9orf131Q5VYM1 1079 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
COL5A1-207ENST00000469093 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-207ENST00000469093 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
COL5A1-207ENST00000469093 SCN11AQ9UI33 1791 aa16.6■□□□□ 0.25
COL5A1-207ENST00000469093 NFIXQ14938 502 aa16.6■□□□□ 0.25
COL5A1-207ENST00000469093 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
COL5A1-207ENST00000469093 NARFQ9UHQ1 456 aa16.6■□□□□ 0.25
COL5A1-207ENST00000469093 APLP1P51693 650 aa16.59■□□□□ 0.25
COL5A1-207ENST00000469093 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
COL5A1-207ENST00000469093 TJP1Q07157 1748 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms