RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 BTBD11A6QL63 1104 aa19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 ADAMTS2O95450 1211 aa19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 AAMPQ13685 434 aa19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 NKX1-1Q15270 411 aaPredicted RBP19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 B4GALNT3Q6L9W6 998 aa19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 DZIP1LQ8IYY4 767 aaKnown RBP19.21■□□□□ 0.67
CRAMP1-206ENST00000468839 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
CRAMP1-206ENST00000468839 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
CRAMP1-206ENST00000468839 CCDC136Q96JN2 1154 aa19.2■□□□□ 0.66
CRAMP1-206ENST00000468839 SPATA31A6Q5VVP1 1343 aa19.2■□□□□ 0.66
CRAMP1-206ENST00000468839 HOXB7P09629 217 aa19.19■□□□□ 0.66
CRAMP1-206ENST00000468839 RLBP1P12271 317 aa19.19■□□□□ 0.66
CRAMP1-206ENST00000468839 TRIM27P14373 513 aa19.19■□□□□ 0.66
CRAMP1-206ENST00000468839 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
CRAMP1-206ENST00000468839 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
CRAMP1-206ENST00000468839 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.18■□□□□ 0.66
CRAMP1-206ENST00000468839 CHMP4AQ9BY43 222 aa19.18■□□□□ 0.66
CRAMP1-206ENST00000468839 THRAP3Q9Y2W1 955 aaKnown RBP19.18■□□□□ 0.66
CRAMP1-206ENST00000468839 ITGB4P16144 1822 aa19.18■□□□□ 0.66
CRAMP1-206ENST00000468839 HEG1Q9ULI3 1381 aa19.18■□□□□ 0.66
CRAMP1-206ENST00000468839 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
CRAMP1-206ENST00000468839 CCDC30Q5VVM6 783 aa19.16■□□□□ 0.66
CRAMP1-206ENST00000468839 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
CRAMP1-206ENST00000468839 TOGARAM1Q9Y4F4 1720 aa19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 KCNQ3O43525 872 aa19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
CRAMP1-206ENST00000468839 UBR2Q8IWV8 1755 aa19.14■□□□□ 0.66
CRAMP1-206ENST00000468839 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
CRAMP1-206ENST00000468839 USP35Q9P2H5 1018 aa19.14■□□□□ 0.65
CRAMP1-206ENST00000468839 PAPPAQ13219 1627 aa19.14■□□□□ 0.65
CRAMP1-206ENST00000468839 PTPRCP08575 1304 aa19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 LRP6O75581 1613 aa19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 N4BP2Q86UW6 1770 aaPredicted RBP19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 KAT6BQ8WYB5 2073 aa19.13■□□□□ 0.65
CRAMP1-206ENST00000468839 C5P01031 1676 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 ABCC4O15439 1325 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 HSPA1LP34931 641 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 CABP4P57796 275 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 ZNF790Q6PG37 636 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 TMEM57Q8N5G2 664 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 DDX19BQ9UMR2 479 aa19.12■□□□□ 0.65
CRAMP1-206ENST00000468839 DDX54Q8TDD1 881 aaKnown RBP19.11■□□□□ 0.65
CRAMP1-206ENST00000468839 BCL9LQ86UU0 1499 aa19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 EXOC5O00471 708 aa19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 GIGYF1O75420 1035 aaPredicted RBP19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 LAMB4A4D0S4 1761 aa19.1■□□□□ 0.65
CRAMP1-206ENST00000468839 RGS12O14924 1447 aa19.09■□□□□ 0.65
CRAMP1-206ENST00000468839 TNS2Q63HR2 1409 aa19.09■□□□□ 0.65
CRAMP1-206ENST00000468839 HDGFL1Q5TGJ6 251 aa19.09■□□□□ 0.65
CRAMP1-206ENST00000468839 VPS72Q15906 364 aa19.08■□□□□ 0.64
CRAMP1-206ENST00000468839 CHMP4BQ9H444 224 aaKnown RBP19.08■□□□□ 0.64
CRAMP1-206ENST00000468839 SLC39A6Q13433 755 aa19.07■□□□□ 0.64
CRAMP1-206ENST00000468839 G2E3Q7L622 706 aa19.07■□□□□ 0.64
CRAMP1-206ENST00000468839 ITPRIPQ8IWB1 547 aa19.07■□□□□ 0.64
CRAMP1-206ENST00000468839 C8orf37Q96NL8 207 aa19.07■□□□□ 0.64
CRAMP1-206ENST00000468839 INTS3Q68E01 1043 aaKnown RBP19.06■□□□□ 0.64
CRAMP1-206ENST00000468839 GLI3P10071 1580 aa19.06■□□□□ 0.64
CRAMP1-206ENST00000468839 KDM2BQ8NHM5 1336 aa19.05■□□□□ 0.64
CRAMP1-206ENST00000468839 TTC5Q8N0Z6 440 aa19.05■□□□□ 0.64
CRAMP1-206ENST00000468839 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
CRAMP1-206ENST00000468839 ZBTB7BO15156 539 aaPredicted RBP19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 EIF2S2P20042 333 aaKnown RBP19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 FLIIQ13045 1269 aa19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 DOT1LQ8TEK3 1739 aa19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 NECTIN2Q92692 538 aa19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
CRAMP1-206ENST00000468839 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
CRAMP1-206ENST00000468839 DDB1Q16531 1140 aa19.03■□□□□ 0.64
CRAMP1-206ENST00000468839 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
CRAMP1-206ENST00000468839 CCDC9Q9Y3X0 531 aaKnown RBP19.03■□□□□ 0.64
CRAMP1-206ENST00000468839 KCPQ6ZWJ8 1503 aa19.02■□□□□ 0.64
CRAMP1-206ENST00000468839 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
CRAMP1-206ENST00000468839 CHPF2Q9P2E5 772 aa19.01■□□□□ 0.63
CRAMP1-206ENST00000468839 USP21Q9UK80 565 aa19.01■□□□□ 0.63
CRAMP1-206ENST00000468839 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
CRAMP1-206ENST00000468839 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
CRAMP1-206ENST00000468839 TMOD3Q9NYL9 352 aa19■□□□□ 0.63
CRAMP1-206ENST00000468839 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
CRAMP1-206ENST00000468839 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
CRAMP1-206ENST00000468839 CCT4P50991 539 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms