RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 GDF2Q9UK05 429 aaPredicted RBP8.73□□□□□ -1.01
SSB-208ENST00000468600 ZBBXA8MT70 800 aa8.72□□□□□ -1.01
SSB-208ENST00000468600 RFC5P40937 340 aa8.72□□□□□ -1.01
SSB-208ENST00000468600 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
SSB-208ENST00000468600 CYP2U1Q7Z449 544 aa8.72□□□□□ -1.01
SSB-208ENST00000468600 CFHR5Q9BXR6 569 aa8.72□□□□□ -1.01
SSB-208ENST00000468600 GNB5O14775 395 aa8.71□□□□□ -1.02
SSB-208ENST00000468600 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
SSB-208ENST00000468600 GRIP2Q9C0E4 1043 aa8.71□□□□□ -1.02
SSB-208ENST00000468600 ERVK-9P63128 1117 aa8.7□□□□□ -1.02
SSB-208ENST00000468600 ZNF592Q92610 1267 aa8.7□□□□□ -1.02
SSB-208ENST00000468600 SPATA31C2B4DYI2 1134 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 F11P03951 625 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 CLN3Q13286 438 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
SSB-208ENST00000468600 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 SLCO4C1Q6ZQN7 724 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
SSB-208ENST00000468600 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
SSB-208ENST00000468600 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
SSB-208ENST00000468600 DGKGP49619 791 aa8.68□□□□□ -1.02
SSB-208ENST00000468600 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
SSB-208ENST00000468600 WASLO00401 505 aaPredicted RBP8.67□□□□□ -1.02
SSB-208ENST00000468600 C2CD2LO14523 706 aa8.67□□□□□ -1.02
SSB-208ENST00000468600 FBXO45P0C2W1 286 aa8.67□□□□□ -1.02
SSB-208ENST00000468600 AMPD1P23109 780 aa8.66□□□□□ -1.02
SSB-208ENST00000468600 MCCD1P59942 119 aaPredicted RBP8.66□□□□□ -1.02
SSB-208ENST00000468600 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
SSB-208ENST00000468600 ARHGEF10LQ9HCE6 1279 aa8.66□□□□□ -1.02
SSB-208ENST00000468600 PHF24Q9UPV7 400 aa8.66□□□□□ -1.02
SSB-208ENST00000468600 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
SSB-208ENST00000468600 GGA1Q9UJY5 639 aa8.65□□□□□ -1.02
SSB-208ENST00000468600 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
SSB-208ENST00000468600 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
SSB-208ENST00000468600 PIK3R2O00459 728 aa8.64□□□□□ -1.03
SSB-208ENST00000468600 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
SSB-208ENST00000468600 BTBD6Q96KE9 485 aa8.64□□□□□ -1.03
SSB-208ENST00000468600 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
SSB-208ENST00000468600 GPAMQ9HCL2 828 aa8.64□□□□□ -1.03
SSB-208ENST00000468600 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
SSB-208ENST00000468600 EPXP11678 715 aa8.63□□□□□ -1.03
SSB-208ENST00000468600 SCTRP47872 440 aa8.63□□□□□ -1.03
SSB-208ENST00000468600 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
SSB-208ENST00000468600 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
SSB-208ENST00000468600 ARTNQ5T4W7 220 aa8.62□□□□□ -1.03
SSB-208ENST00000468600 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
SSB-208ENST00000468600 A0A1B0GTH6 734 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 TRAK2O60296 914 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 BMP4P12644 408 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 NR1H3Q13133 447 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 NKAPLQ5M9Q1 402 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 ZFP64Q9NPA5 681 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
SSB-208ENST00000468600 GNRH1P01148 92 aa8.6□□□□□ -1.03
SSB-208ENST00000468600 GATA4P43694 442 aa8.6□□□□□ -1.03
SSB-208ENST00000468600 CNKSR1Q969H4 720 aa8.6□□□□□ -1.03
SSB-208ENST00000468600 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
SSB-208ENST00000468600 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 CTBSQ01459 385 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
SSB-208ENST00000468600 GNASQ5JWF2 1037 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 PGBD3Q8N328 593 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 GJD4Q96KN9 370 aaPredicted RBP8.59□□□□□ -1.03
SSB-208ENST00000468600 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.03
SSB-208ENST00000468600 ESYT1Q9BSJ8 1104 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
SSB-208ENST00000468600 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
SSB-208ENST00000468600 MYCP01106 439 aaPredicted RBP8.58□□□□□ -1.04
SSB-208ENST00000468600 PHKA2P46019 1235 aa8.58□□□□□ -1.04
SSB-208ENST00000468600 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
SSB-208ENST00000468600 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
SSB-208ENST00000468600 CENPCQ03188 943 aa8.57□□□□□ -1.04
SSB-208ENST00000468600 EFHC2Q5JST6 749 aa8.57□□□□□ -1.04
SSB-208ENST00000468600 FGFR3P22607 806 aa8.56□□□□□ -1.04
SSB-208ENST00000468600 TMEM214Q6NUQ4 689 aaKnown RBP8.56□□□□□ -1.04
SSB-208ENST00000468600 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
SSB-208ENST00000468600 NEURL1BA8MQ27 555 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 DYRK3O43781 588 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 IL2RAP01589 272 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 ARAFP10398 606 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 RUBCNLQ9H714 662 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 GOLGA2P5Q9HBQ8 144 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
SSB-208ENST00000468600 BNIP3LO60238 219 aa8.54□□□□□ -1.04
SSB-208ENST00000468600 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
SSB-208ENST00000468600 APBB1O00213 710 aa8.52□□□□□ -1.05
SSB-208ENST00000468600 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
SSB-208ENST00000468600 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.05
SSB-208ENST00000468600 SPATA31C1P0DKV0 1188 aa8.51□□□□□ -1.05
SSB-208ENST00000468600 MSX1P28360 303 aa8.51□□□□□ -1.05
SSB-208ENST00000468600 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
SSB-208ENST00000468600 KLF15Q9UIH9 416 aa8.51□□□□□ -1.05
SSB-208ENST00000468600 HRH3Q9Y5N1 445 aa8.51□□□□□ -1.05
SSB-208ENST00000468600 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
SSB-208ENST00000468600 RHBDD1Q8TEB9 315 aa8.5□□□□□ -1.05
SSB-208ENST00000468600 PLVAPQ9BX97 442 aa8.5□□□□□ -1.05
SSB-208ENST00000468600 FHDC1Q9C0D6 1143 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms