RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
SFPQ-205ENST00000468598 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
SFPQ-205ENST00000468598 EXOSC9Q06265 439 aaKnown RBP8.79□□□□□ -1
SFPQ-205ENST00000468598 PEAK1Q9H792 1746 aa8.79□□□□□ -1
SFPQ-205ENST00000468598 NFAT5O94916 1531 aa8.79□□□□□ -1
SFPQ-205ENST00000468598 U2SURPO15042 1029 aaKnown RBP8.79□□□□□ -1
SFPQ-205ENST00000468598 HOXC9P31274 260 aa8.79□□□□□ -1
SFPQ-205ENST00000468598 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
SFPQ-205ENST00000468598 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
SFPQ-205ENST00000468598 PLEKHF1Q96S99 279 aa8.79□□□□□ -1
SFPQ-205ENST00000468598 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
SFPQ-205ENST00000468598 TMPOP42166 694 aaKnown RBP8.78□□□□□ -1
SFPQ-205ENST00000468598 ZNF445P59923 1031 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 KIF2CQ99661 725 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 PRDM11Q9NQV5 511 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 AATKQ6ZMQ8 1374 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 HMOX1P09601 288 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 TMEM57Q8N5G2 664 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 LTN1O94822 1766 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 EP400Q96L91 3159 aa8.78□□□□□ -1
SFPQ-205ENST00000468598 EIF4A2Q14240 407 aaKnown RBP8.77□□□□□ -1
SFPQ-205ENST00000468598 ARHGAP45Q92619 1136 aa8.77□□□□□ -1
SFPQ-205ENST00000468598 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
SFPQ-205ENST00000468598 SLIT3O75094 1523 aa8.77□□□□□ -1.01
SFPQ-205ENST00000468598 MSNP26038 577 aaKnown RBP8.77□□□□□ -1.01
SFPQ-205ENST00000468598 NUCB2P80303 420 aa8.77□□□□□ -1.01
SFPQ-205ENST00000468598 TRIM35Q9UPQ4 493 aa8.77□□□□□ -1.01
SFPQ-205ENST00000468598 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
SFPQ-205ENST00000468598 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
SFPQ-205ENST00000468598 MCM5P33992 734 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 KIAA1211Q6ZU35 1233 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 TSR2Q969E8 191 aaKnown RBP8.76□□□□□ -1.01
SFPQ-205ENST00000468598 PHRF1Q9P1Y6 1649 aaKnown RBP8.76□□□□□ -1.01
SFPQ-205ENST00000468598 CRYBG1Q9Y4K1 1723 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 IL13P35225 146 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 IP6K1Q92551 441 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 RABEP1Q15276 862 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 MTERF4Q7Z6M4 381 aaKnown RBP8.76□□□□□ -1.01
SFPQ-205ENST00000468598 BTG4Q9NY30 223 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 FLT4P35916 1363 aa8.76□□□□□ -1.01
SFPQ-205ENST00000468598 ZNF500O60304 480 aaPredicted RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 BAG4O95429 457 aaKnown RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 CALD1Q05682 793 aaKnown RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 ANKRD24Q8TF21 1146 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 C8orf37Q96NL8 207 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 JCADQ9P266 1359 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 CDC45O75419 566 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 NBPF6Q5VWK0 638 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 NBPF4Q96M43 638 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 EYA1Q99502 592 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
SFPQ-205ENST00000468598 CWC22Q9HCG8 908 aaKnown RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 NOL7Q9UMY1 257 aaKnown RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 DDX49Q9Y6V7 483 aaKnown RBP8.75□□□□□ -1.01
SFPQ-205ENST00000468598 CSPP1Q1MSJ5 1256 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 FBXO41Q8TF61 875 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 PDLIM2Q96JY6 352 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 KIF24Q5T7B8 1368 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 SSFA2P28290 1259 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 SULT6B1Q6IMI4 303 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 CAMTA1Q9Y6Y1 1673 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 LRP6O75581 1613 aa8.74□□□□□ -1.01
SFPQ-205ENST00000468598 CDK12Q9NYV4 1490 aaPredicted RBP8.74□□□□□ -1.01
SFPQ-205ENST00000468598 RGPD2P0DJD1 1756 aa8.73□□□□□ -1.01
SFPQ-205ENST00000468598 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-205ENST00000468598 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
SFPQ-205ENST00000468598 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
SFPQ-205ENST00000468598 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-205ENST00000468598 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
SFPQ-205ENST00000468598 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
SFPQ-205ENST00000468598 ERBB3P21860 1342 aa8.73□□□□□ -1.01
SFPQ-205ENST00000468598 RIPK4P57078 832 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 EVA1CP58658 441 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 ANKRD45Q5TZF3 282 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 CPDO75976 1380 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 CD2BP2O95400 341 aaKnown RBP8.72□□□□□ -1.01
SFPQ-205ENST00000468598 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 COL22A1Q8NFW1 1626 aaPredicted RBP8.72□□□□□ -1.01
SFPQ-205ENST00000468598 COL18A1P39060 1754 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 FCHSD2O94868 740 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
SFPQ-205ENST00000468598 MEX3CQ5U5Q3 659 aaKnown RBP8.72□□□□□ -1.01
SFPQ-205ENST00000468598 ZSCAN23Q3MJ62 389 aa8.71□□□□□ -1.02
SFPQ-205ENST00000468598 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.02
SFPQ-205ENST00000468598 LMBRD1Q9NUN5 540 aa8.71□□□□□ -1.02
SFPQ-205ENST00000468598 ABCC4O15439 1325 aa8.7□□□□□ -1.02
SFPQ-205ENST00000468598 DYNC1I1O14576 645 aa8.7□□□□□ -1.02
SFPQ-205ENST00000468598 MRPL50Q8N5N7 158 aaKnown RBP8.7□□□□□ -1.02
SFPQ-205ENST00000468598 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
SFPQ-205ENST00000468598 ZKSCAN5Q9Y2L8 839 aa8.7□□□□□ -1.02
SFPQ-205ENST00000468598 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
SFPQ-205ENST00000468598 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
SFPQ-205ENST00000468598 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms